RNA–Protein interactions for RNA: ENST00000559604.1

KNSTRN-208, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 4

Gene KNSTRN, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-208ENST00000559604 CLIC4Q9Y696 253 aa20.84■□□□□ 0.93
KNSTRN-208ENST00000559604 ANHXE9PGG2 379 aa20.83■□□□□ 0.93
KNSTRN-208ENST00000559604 FAM13AO94988 1023 aa20.83■□□□□ 0.93
KNSTRN-208ENST00000559604 POU2F2P09086 479 aa20.83■□□□□ 0.93
KNSTRN-208ENST00000559604 CXCL8P10145 99 aa20.83■□□□□ 0.93
KNSTRN-208ENST00000559604 NPR3P17342 541 aa20.83■□□□□ 0.93
KNSTRN-208ENST00000559604 PDCP20941 246 aa20.83■□□□□ 0.93
KNSTRN-208ENST00000559604 CWF19L1Q69YN2 538 aaKnown RBP20.83■□□□□ 0.93
KNSTRN-208ENST00000559604 SLC8B1Q6J4K2 584 aa20.83■□□□□ 0.93
KNSTRN-208ENST00000559604 USP49Q70CQ1 688 aa20.83■□□□□ 0.93
KNSTRN-208ENST00000559604 TMEM130Q8N3G9 435 aa20.83■□□□□ 0.93
KNSTRN-208ENST00000559604 RASSF8Q8NHQ8 419 aa20.83■□□□□ 0.93
KNSTRN-208ENST00000559604 NXPE3Q969Y0 559 aa20.83■□□□□ 0.93
KNSTRN-208ENST00000559604 BICD1Q96G01 975 aa20.83■□□□□ 0.93
KNSTRN-208ENST00000559604 CCSER1Q9C0I3 900 aa20.83■□□□□ 0.93
KNSTRN-208ENST00000559604 PARVGQ9HBI0 331 aa20.83■□□□□ 0.93
KNSTRN-208ENST00000559604 TUBGCP4Q9UGJ1 667 aa20.83■□□□□ 0.93
KNSTRN-208ENST00000559604 TBX20Q9UMR3 447 aa20.83■□□□□ 0.93
KNSTRN-208ENST00000559604 TTC26A0AVF1 554 aa20.82■□□□□ 0.92
KNSTRN-208ENST00000559604 K7ENM7 598 aa20.82■□□□□ 0.92
KNSTRN-208ENST00000559604 SYN3O14994 580 aa20.82■□□□□ 0.92
KNSTRN-208ENST00000559604 TBC1D4O60343 1298 aa20.82■□□□□ 0.92
KNSTRN-208ENST00000559604 XYLBO75191 536 aa20.82■□□□□ 0.92
KNSTRN-208ENST00000559604 PIGRP01833 764 aa20.82■□□□□ 0.92
KNSTRN-208ENST00000559604 CLTAP09496 248 aa20.82■□□□□ 0.92
KNSTRN-208ENST00000559604 TNFSF9P41273 254 aa20.82■□□□□ 0.92
KNSTRN-208ENST00000559604 MATR3P43243 847 aaKnown RBP eCLIP20.82■□□□□ 0.92
KNSTRN-208ENST00000559604 CLCN5P51795 746 aa20.82■□□□□ 0.92
KNSTRN-208ENST00000559604 ROR1Q01973 937 aa20.82■□□□□ 0.92
KNSTRN-208ENST00000559604 SPAG1Q07617 926 aa20.82■□□□□ 0.92
KNSTRN-208ENST00000559604 RESTQ13127 1097 aa20.82■□□□□ 0.92
KNSTRN-208ENST00000559604 HTR4Q13639 388 aa20.82■□□□□ 0.92
KNSTRN-208ENST00000559604 ST13P5Q8NFI4 369 aaPredicted RBP20.82■□□□□ 0.92
KNSTRN-208ENST00000559604 LARP4BQ92615 738 aaKnown RBP20.82■□□□□ 0.92
KNSTRN-208ENST00000559604 EPSTI1Q96J88 318 aa20.82■□□□□ 0.92
KNSTRN-208ENST00000559604 FIZ1Q96SL8 496 aa20.82■□□□□ 0.92
KNSTRN-208ENST00000559604 HCFC1R1Q9NWW0 138 aa20.82■□□□□ 0.92
KNSTRN-208ENST00000559604 FBXL21Q9UKT6 434 aa20.82■□□□□ 0.92
KNSTRN-208ENST00000559604 POLIQ9UNA4 740 aa20.82■□□□□ 0.92
KNSTRN-208ENST00000559604 NUB1Q9Y5A7 615 aa20.82■□□□□ 0.92
KNSTRN-208ENST00000559604 ZFP37Q9Y6Q3 630 aaPredicted RBP20.82■□□□□ 0.92
KNSTRN-208ENST00000559604 MYH15Q9Y2K3 1946 aa20.81■□□□□ 0.92
KNSTRN-208ENST00000559604 HNRNPDLO14979 420 aaKnown RBP20.81■□□□□ 0.92
KNSTRN-208ENST00000559604 GALR2O43603 387 aaPredicted RBP20.81■□□□□ 0.92
KNSTRN-208ENST00000559604 TRAK2O60296 914 aa20.81■□□□□ 0.92
KNSTRN-208ENST00000559604 FAM189A1O60320 539 aa20.81■□□□□ 0.92
KNSTRN-208ENST00000559604 ABLIM3O94929 683 aa20.81■□□□□ 0.92
KNSTRN-208ENST00000559604 KRT18P05783 430 aaKnown RBP20.81■□□□□ 0.92
KNSTRN-208ENST00000559604 CFHP08603 1231 aa20.81■□□□□ 0.92
KNSTRN-208ENST00000559604 SYT1P21579 422 aa20.81■□□□□ 0.92
KNSTRN-208ENST00000559604 MARCKSP29966 332 aaPredicted RBP20.81■□□□□ 0.92
KNSTRN-208ENST00000559604 LIG4P49917 911 aa20.81■□□□□ 0.92
KNSTRN-208ENST00000559604 MRPL58Q14197 206 aaKnown RBP20.81■□□□□ 0.92
KNSTRN-208ENST00000559604 SPECC1Q5M775 1068 aa20.81■□□□□ 0.92
KNSTRN-208ENST00000559604 ZBTB41Q5SVQ8 909 aa20.81■□□□□ 0.92
KNSTRN-208ENST00000559604 FAM173BQ6P4H8 233 aa20.81■□□□□ 0.92
KNSTRN-208ENST00000559604 RTL10Q7L3V2 364 aa20.81■□□□□ 0.92
KNSTRN-208ENST00000559604 SIX5Q8N196 739 aa20.81■□□□□ 0.92
KNSTRN-208ENST00000559604 FLCNQ8NFG4 579 aa20.81■□□□□ 0.92
KNSTRN-208ENST00000559604 ZNF461Q8TAF7 563 aa20.81■□□□□ 0.92
KNSTRN-208ENST00000559604 ITFG1Q8TB96 612 aa20.81■□□□□ 0.92
KNSTRN-208ENST00000559604 SUSD3Q96L08 255 aa20.81■□□□□ 0.92
KNSTRN-208ENST00000559604 BACH2Q9BYV9 841 aa20.81■□□□□ 0.92
KNSTRN-208ENST00000559604 PLEKHA5Q9HAU0 1116 aa20.81■□□□□ 0.92
KNSTRN-208ENST00000559604 DNMT3BQ9UBC3 853 aaKnown RBP20.81■□□□□ 0.92
KNSTRN-208ENST00000559604 WNT16Q9UBV4 365 aa20.81■□□□□ 0.92
KNSTRN-208ENST00000559604 FBXO2Q9UK22 296 aaPredicted RBP20.81■□□□□ 0.92
KNSTRN-208ENST00000559604 USP34Q70CQ2 3546 aa20.81■□□□□ 0.92
KNSTRN-208ENST00000559604 WDR27A2RRH5 827 aa20.8■□□□□ 0.92
KNSTRN-208ENST00000559604 SRFP11831 508 aa20.8■□□□□ 0.92
KNSTRN-208ENST00000559604 SCP2P22307 547 aa20.8■□□□□ 0.92
KNSTRN-208ENST00000559604 MCM4P33991 863 aa20.8■□□□□ 0.92
KNSTRN-208ENST00000559604 DDIT3P35638 169 aa20.8■□□□□ 0.92
KNSTRN-208ENST00000559604 ZBTB6Q15916 424 aa20.8■□□□□ 0.92
KNSTRN-208ENST00000559604 SLC39A4Q6P5W5 647 aa20.8■□□□□ 0.92
KNSTRN-208ENST00000559604 FGF13Q92913 245 aa20.8■□□□□ 0.92
KNSTRN-208ENST00000559604 ZHX3Q9H4I2 956 aa20.8■□□□□ 0.92
KNSTRN-208ENST00000559604 FAM86C1Q9NVL1 165 aa20.8■□□□□ 0.92
KNSTRN-208ENST00000559604 FBXL5Q9UKA1 691 aa20.8■□□□□ 0.92
KNSTRN-208ENST00000559604 CDH7Q9ULB5 785 aa20.8■□□□□ 0.92
KNSTRN-208ENST00000559604 NUMBLQ9Y6R0 609 aa20.8■□□□□ 0.92
KNSTRN-208ENST00000559604 MYO15AQ9UKN7 3530 aa20.8■□□□□ 0.92
KNSTRN-208ENST00000559604 DMDP11532 3685 aa20.79■□□□□ 0.92
KNSTRN-208ENST00000559604 LACTBL1A8MY62 500 aa20.79■□□□□ 0.92
KNSTRN-208ENST00000559604 H0Y858 1186 aa20.79■□□□□ 0.92
KNSTRN-208ENST00000559604 H7C4K7 107 aa20.79■□□□□ 0.92
KNSTRN-208ENST00000559604 PI15O43692 258 aa20.79■□□□□ 0.92
KNSTRN-208ENST00000559604 TBCAO75347 108 aaKnown RBP20.79■□□□□ 0.92
KNSTRN-208ENST00000559604 AOC1P19801 751 aa20.79■□□□□ 0.92
KNSTRN-208ENST00000559604 NMT1P30419 496 aaKnown RBP20.79■□□□□ 0.92
KNSTRN-208ENST00000559604 LRPAP1P30533 357 aa20.79■□□□□ 0.92
KNSTRN-208ENST00000559604 GTF2BQ00403 316 aa20.79■□□□□ 0.92
KNSTRN-208ENST00000559604 ENOX2Q16206 610 aaKnown RBP20.79■□□□□ 0.92
KNSTRN-208ENST00000559604 FGF14Q92915 247 aa20.79■□□□□ 0.92
KNSTRN-208ENST00000559604 KIF12Q96FN5 646 aa20.79■□□□□ 0.92
KNSTRN-208ENST00000559604 RPP25Q9BUL9 199 aaKnown RBP20.79■□□□□ 0.92
KNSTRN-208ENST00000559604 SRPRBQ9Y5M8 271 aaKnown RBP20.79■□□□□ 0.92
KNSTRN-208ENST00000559604 ANK1P16157 1881 aa20.78■□□□□ 0.92
KNSTRN-208ENST00000559604 A0A0B4J269 797 aa20.78■□□□□ 0.92
KNSTRN-208ENST00000559604 ARHGEF37A1IGU5 675 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms