RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 CA8P35219 290 aa21.16■□□□□ 0.98
SHF-205ENST00000559566 POU5F1Q01860 360 aaKnown RBP21.16■□□□□ 0.98
SHF-205ENST00000559566 DSG1Q02413 1049 aa21.16■□□□□ 0.98
SHF-205ENST00000559566 TMEM132DQ14C87 1099 aa21.16■□□□□ 0.98
SHF-205ENST00000559566 ISM2Q6H9L7 571 aa21.16■□□□□ 0.98
SHF-205ENST00000559566 HS2ST1Q7LGA3 356 aa21.16■□□□□ 0.98
SHF-205ENST00000559566 CD302Q8IX05 232 aa21.16■□□□□ 0.98
SHF-205ENST00000559566 RDH13Q8NBN7 331 aa21.16■□□□□ 0.98
SHF-205ENST00000559566 SMARCE1Q969G3 411 aa21.16■□□□□ 0.98
SHF-205ENST00000559566 CCDC47Q96A33 483 aaKnown RBP21.16■□□□□ 0.98
SHF-205ENST00000559566 CCDC34Q96HJ3 373 aa21.16■□□□□ 0.98
SHF-205ENST00000559566 GZF1Q9H116 711 aaPredicted RBP21.16■□□□□ 0.98
SHF-205ENST00000559566 UBE2ZQ9H832 354 aaPredicted RBP21.16■□□□□ 0.98
SHF-205ENST00000559566 PDE11AQ9HCR9 933 aa21.16■□□□□ 0.98
SHF-205ENST00000559566 IRAK3Q9Y616 596 aa21.16■□□□□ 0.98
SHF-205ENST00000559566 XIRP2A4UGR9 3374 aa21.16■□□□□ 0.98
SHF-205ENST00000559566 CITO14578 2027 aa21.16■□□□□ 0.98
SHF-205ENST00000559566 PDCD11Q14690 1871 aaKnown RBP21.15■□□□□ 0.98
SHF-205ENST00000559566 SF3B1O75533 1304 aaKnown RBP eCLIP21.15■□□□□ 0.98
SHF-205ENST00000559566 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.15■□□□□ 0.98
SHF-205ENST00000559566 CLASP2O75122 1294 aaKnown RBP21.15■□□□□ 0.98
SHF-205ENST00000559566 CYP3A5P20815 502 aa21.15■□□□□ 0.98
SHF-205ENST00000559566 BMP6P22004 513 aa21.15■□□□□ 0.98
SHF-205ENST00000559566 GLUD2P49448 558 aa21.15■□□□□ 0.98
SHF-205ENST00000559566 ADAM15Q13444 863 aa21.15■□□□□ 0.98
SHF-205ENST00000559566 KCNC3Q14003 757 aa21.15■□□□□ 0.98
SHF-205ENST00000559566 FAM171A1Q5VUB5 890 aa21.15■□□□□ 0.98
SHF-205ENST00000559566 LMBRD2Q68DH5 695 aaPredicted RBP21.15■□□□□ 0.98
SHF-205ENST00000559566 PRSS55Q6UWB4 352 aaPredicted RBP21.15■□□□□ 0.98
SHF-205ENST00000559566 GUF1Q8N442 669 aaKnown RBP21.15■□□□□ 0.98
SHF-205ENST00000559566 PABPC5Q96DU9 382 aaKnown RBP21.15■□□□□ 0.98
SHF-205ENST00000559566 DDX27Q96GQ7 796 aaKnown RBP21.15■□□□□ 0.98
SHF-205ENST00000559566 GSDMAQ96QA5 445 aa21.15■□□□□ 0.98
SHF-205ENST00000559566 DMAC2Q9NW81 257 aa21.15■□□□□ 0.98
SHF-205ENST00000559566 CLDND1Q9NY35 253 aa21.15■□□□□ 0.98
SHF-205ENST00000559566 DERAQ9Y315 318 aa21.15■□□□□ 0.98
SHF-205ENST00000559566 C2CD2Q9Y426 696 aa21.15■□□□□ 0.98
SHF-205ENST00000559566 ANK1P16157 1881 aa21.14■□□□□ 0.97
SHF-205ENST00000559566 TULP1O00294 542 aaPredicted RBP21.14■□□□□ 0.97
SHF-205ENST00000559566 KIAA0391O15091 583 aaKnown RBP21.14■□□□□ 0.97
SHF-205ENST00000559566 IL18RAPO95256 599 aa21.14■□□□□ 0.97
SHF-205ENST00000559566 SMC2O95347 1197 aa21.14■□□□□ 0.97
SHF-205ENST00000559566 URODP06132 367 aa21.14■□□□□ 0.97
SHF-205ENST00000559566 CNPP09543 421 aaKnown RBP21.14■□□□□ 0.97
SHF-205ENST00000559566 TKTP29401 623 aaKnown RBP21.14■□□□□ 0.97
SHF-205ENST00000559566 RPL9P32969 192 aaKnown RBP21.14■□□□□ 0.97
SHF-205ENST00000559566 PRCPP42785 496 aa21.14■□□□□ 0.97
SHF-205ENST00000559566 SNRPFP62306 86 aaKnown RBP21.14■□□□□ 0.97
SHF-205ENST00000559566 CAMK4Q16566 473 aa21.14■□□□□ 0.97
SHF-205ENST00000559566 ZCWPW2Q504Y3 356 aa21.14■□□□□ 0.97
SHF-205ENST00000559566 ZNF658Q5TYW1 1059 aaPredicted RBP21.14■□□□□ 0.97
SHF-205ENST00000559566 EFHBQ8N7U6 833 aa21.14■□□□□ 0.97
SHF-205ENST00000559566 XXYLT1Q8NBI6 393 aa21.14■□□□□ 0.97
SHF-205ENST00000559566 PLEKHO2Q8TD55 490 aa21.14■□□□□ 0.97
SHF-205ENST00000559566 HLA-CQ95604 372 aa21.14■□□□□ 0.97
SHF-205ENST00000559566 KLHL5Q96PQ7 755 aa21.14■□□□□ 0.97
SHF-205ENST00000559566 THEGQ9P2T0 379 aa21.14■□□□□ 0.97
SHF-205ENST00000559566 ANO9A1A5B4 782 aa21.13■□□□□ 0.97
SHF-205ENST00000559566 ZNF233A6NK53 670 aa21.13■□□□□ 0.97
SHF-205ENST00000559566 H3BQ06 376 aaPredicted RBP21.13■□□□□ 0.97
SHF-205ENST00000559566 PDXKO00764 312 aa21.13■□□□□ 0.97
SHF-205ENST00000559566 SPTLC1O15269 473 aa21.13■□□□□ 0.97
SHF-205ENST00000559566 NR3C1P04150 777 aa21.13■□□□□ 0.97
SHF-205ENST00000559566 RPL17P18621 184 aaKnown RBP21.13■□□□□ 0.97
SHF-205ENST00000559566 KCNA5P22460 613 aa21.13■□□□□ 0.97
SHF-205ENST00000559566 FGFR3P22607 806 aa21.13■□□□□ 0.97
SHF-205ENST00000559566 CASP4P49662 377 aa21.13■□□□□ 0.97
SHF-205ENST00000559566 SNRNP35Q16560 246 aaKnown RBP21.13■□□□□ 0.97
SHF-205ENST00000559566 USP41Q3LFD5 358 aa21.13■□□□□ 0.97
SHF-205ENST00000559566 C9orf57Q5W0N0 161 aa21.13■□□□□ 0.97
SHF-205ENST00000559566 LLGL2Q6P1M3 1020 aa21.13■□□□□ 0.97
SHF-205ENST00000559566 EP400NLQ6ZTU2 488 aa21.13■□□□□ 0.97
SHF-205ENST00000559566 CEP57Q86XR8 500 aa21.13■□□□□ 0.97
SHF-205ENST00000559566 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.13■□□□□ 0.97
SHF-205ENST00000559566 BEST2Q8NFU1 509 aa21.13■□□□□ 0.97
SHF-205ENST00000559566 OR5B17Q8NGF7 314 aa21.13■□□□□ 0.97
SHF-205ENST00000559566 CXorf38Q8TB03 319 aa21.13■□□□□ 0.97
SHF-205ENST00000559566 RIN2Q8WYP3 895 aaPredicted RBP21.13■□□□□ 0.97
SHF-205ENST00000559566 TSPAN18Q96SJ8 248 aa21.13■□□□□ 0.97
SHF-205ENST00000559566 RXFP1Q9HBX9 757 aa21.13■□□□□ 0.97
SHF-205ENST00000559566 MRPL17Q9NRX2 175 aaKnown RBP21.13■□□□□ 0.97
SHF-205ENST00000559566 RMND1Q9NWS8 449 aa21.13■□□□□ 0.97
SHF-205ENST00000559566 CLEC1BQ9P126 229 aa21.13■□□□□ 0.97
SHF-205ENST00000559566 BARX2Q9UMQ3 279 aaPredicted RBP21.13■□□□□ 0.97
SHF-205ENST00000559566 TRAF3IP3Q9Y228 551 aa21.13■□□□□ 0.97
SHF-205ENST00000559566 TEX28O15482 410 aa21.12■□□□□ 0.97
SHF-205ENST00000559566 CD44P16070 742 aaKnown RBP21.12■□□□□ 0.97
SHF-205ENST00000559566 TFAMQ00059 246 aaKnown RBP21.12■□□□□ 0.97
SHF-205ENST00000559566 CYP24A1Q07973 514 aa21.12■□□□□ 0.97
SHF-205ENST00000559566 LNX1Q8TBB1 728 aaPredicted RBP21.12■□□□□ 0.97
SHF-205ENST00000559566 FEZF2Q8TBJ5 459 aa21.12■□□□□ 0.97
SHF-205ENST00000559566 SLC22A17Q8WUG5 538 aa21.12■□□□□ 0.97
SHF-205ENST00000559566 PPP2R3CQ969Q6 453 aa21.12■□□□□ 0.97
SHF-205ENST00000559566 GBP4Q96PP9 640 aa21.12■□□□□ 0.97
SHF-205ENST00000559566 TTPALQ9BTX7 342 aa21.12■□□□□ 0.97
SHF-205ENST00000559566 CGNQ9P2M7 1197 aaKnown RBP21.12■□□□□ 0.97
SHF-205ENST00000559566 STK39Q9UEW8 545 aa21.12■□□□□ 0.97
SHF-205ENST00000559566 HOOK1Q9UJC3 728 aaKnown RBP21.12■□□□□ 0.97
SHF-205ENST00000559566 HCFC2Q9Y5Z7 792 aa21.12■□□□□ 0.97
SHF-205ENST00000559566 BIN1O00499 593 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms