RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 CCDC183Q5T5S1 534 aa7.76□□□□□ -1.17
ZEB1-216ENST00000559496 NLRC3Q7RTR2 1065 aa7.76□□□□□ -1.17
ZEB1-216ENST00000559496 SPPL2CQ8IUH8 684 aa7.76□□□□□ -1.17
ZEB1-216ENST00000559496 FBXO15Q8NCQ5 510 aaPredicted RBP7.76□□□□□ -1.17
ZEB1-216ENST00000559496 SYTL5Q8TDW5 730 aaPredicted RBP7.76□□□□□ -1.17
ZEB1-216ENST00000559496 MRPS27Q92552 414 aaKnown RBP7.76□□□□□ -1.17
ZEB1-216ENST00000559496 ERCC4Q92889 916 aaPredicted RBP7.76□□□□□ -1.17
ZEB1-216ENST00000559496 FERMT2Q96AC1 680 aa7.76□□□□□ -1.17
ZEB1-216ENST00000559496 CLIC6Q96NY7 704 aa7.76□□□□□ -1.17
ZEB1-216ENST00000559496 SPON2Q9BUD6 331 aa7.76□□□□□ -1.17
ZEB1-216ENST00000559496 ANO3Q9BYT9 981 aa7.76□□□□□ -1.17
ZEB1-216ENST00000559496 GOLPH3LQ9H4A5 285 aa7.76□□□□□ -1.17
ZEB1-216ENST00000559496 NSUN3Q9H649 340 aaKnown RBP7.76□□□□□ -1.17
ZEB1-216ENST00000559496 A1CFQ9NQ94 594 aaKnown RBP7.76□□□□□ -1.17
ZEB1-216ENST00000559496 HOXC10Q9NYD6 342 aa7.76□□□□□ -1.17
ZEB1-216ENST00000559496 FBXO2Q9UK22 296 aaPredicted RBP7.76□□□□□ -1.17
ZEB1-216ENST00000559496 LAD1O00515 517 aa7.75□□□□□ -1.17
ZEB1-216ENST00000559496 NEMFO60524 1076 aa7.75□□□□□ -1.17
ZEB1-216ENST00000559496 COQ9O75208 318 aa7.75□□□□□ -1.17
ZEB1-216ENST00000559496 EIF3JO75822 258 aaKnown RBP7.75□□□□□ -1.17
ZEB1-216ENST00000559496 CFBP00751 764 aa7.75□□□□□ -1.17
ZEB1-216ENST00000559496 CMA1P23946 247 aa7.75□□□□□ -1.17
ZEB1-216ENST00000559496 HOXA7P31268 230 aaPredicted RBP7.75□□□□□ -1.17
ZEB1-216ENST00000559496 ZNF76P36508 570 aa7.75□□□□□ -1.17
ZEB1-216ENST00000559496 OAZ1P54368 228 aa7.75□□□□□ -1.17
ZEB1-216ENST00000559496 TEKQ02763 1124 aa7.75□□□□□ -1.17
ZEB1-216ENST00000559496 DUSP4Q13115 394 aa7.75□□□□□ -1.17
ZEB1-216ENST00000559496 NR0B2Q15466 257 aa7.75□□□□□ -1.17
ZEB1-216ENST00000559496 ZRSR1Q15695 479 aaKnown RBP7.75□□□□□ -1.17
ZEB1-216ENST00000559496 LCE1DQ5T752 114 aa7.75□□□□□ -1.17
ZEB1-216ENST00000559496 ARL6IP4Q66PJ3 421 aaKnown RBP7.75□□□□□ -1.17
ZEB1-216ENST00000559496 SHC4Q6S5L8 630 aa7.75□□□□□ -1.17
ZEB1-216ENST00000559496 SYDE1Q6ZW31 735 aaPredicted RBP7.75□□□□□ -1.17
ZEB1-216ENST00000559496 FASTKD5Q7L8L6 764 aaKnown RBP7.75□□□□□ -1.17
ZEB1-216ENST00000559496 MCF2L2Q86YR7 1114 aa7.75□□□□□ -1.17
ZEB1-216ENST00000559496 FMNL3Q8IVF7 1028 aa7.75□□□□□ -1.17
ZEB1-216ENST00000559496 REPS2Q8NFH8 660 aa7.75□□□□□ -1.17
ZEB1-216ENST00000559496 EXOC4Q96A65 974 aa7.75□□□□□ -1.17
ZEB1-216ENST00000559496 WNK4Q96J92 1243 aa7.75□□□□□ -1.17
ZEB1-216ENST00000559496 EAF1Q96JC9 268 aaPredicted RBP7.75□□□□□ -1.17
ZEB1-216ENST00000559496 DIRC2Q96SL1 478 aa7.75□□□□□ -1.17
ZEB1-216ENST00000559496 NAP1L4Q99733 375 aaKnown RBP7.75□□□□□ -1.17
ZEB1-216ENST00000559496 FAM107BQ9H098 131 aa7.75□□□□□ -1.17
ZEB1-216ENST00000559496 HOMER2Q9NSB8 354 aa7.75□□□□□ -1.17
ZEB1-216ENST00000559496 DDX19AQ9NUU7 478 aaKnown RBP7.75□□□□□ -1.17
ZEB1-216ENST00000559496 DACT1Q9NYF0 836 aa7.75□□□□□ -1.17
ZEB1-216ENST00000559496 ADAMTS5Q9UNA0 930 aa7.75□□□□□ -1.17
ZEB1-216ENST00000559496 AGTPBP1Q9UPW5 1226 aa7.75□□□□□ -1.17
ZEB1-216ENST00000559496 ZNF281Q9Y2X9 895 aa7.75□□□□□ -1.17
ZEB1-216ENST00000559496 SRPRBQ9Y5M8 271 aaKnown RBP7.75□□□□□ -1.17
ZEB1-216ENST00000559496 MYH7BA7E2Y1 1941 aa7.75□□□□□ -1.17
ZEB1-216ENST00000559496 TRPM7Q96QT4 1865 aa7.75□□□□□ -1.17
ZEB1-216ENST00000559496 COL11A1P12107 1806 aaPredicted RBP7.75□□□□□ -1.17
ZEB1-216ENST00000559496 A0A1B0GVL5 298 aa7.74□□□□□ -1.17
ZEB1-216ENST00000559496 SYCE3A1L190 88 aa7.74□□□□□ -1.17
ZEB1-216ENST00000559496 VWA3AA6NCI4 1184 aa7.74□□□□□ -1.17
ZEB1-216ENST00000559496 NFIBO00712 420 aa7.74□□□□□ -1.17
ZEB1-216ENST00000559496 KINO60870 393 aaKnown RBP7.74□□□□□ -1.17
ZEB1-216ENST00000559496 TDP2O95551 362 aa7.74□□□□□ -1.17
ZEB1-216ENST00000559496 ADCY5O95622 1261 aa7.74□□□□□ -1.17
ZEB1-216ENST00000559496 TSPAN15O95858 294 aa7.74□□□□□ -1.17
ZEB1-216ENST00000559496 OR52Z1P0C646 297 aa7.74□□□□□ -1.17
ZEB1-216ENST00000559496 NME1P15531 152 aaKnown RBP7.74□□□□□ -1.17
ZEB1-216ENST00000559496 H2AFXP16104 143 aaPredicted RBP7.74□□□□□ -1.17
ZEB1-216ENST00000559496 PFKFB1P16118 471 aa7.74□□□□□ -1.17
ZEB1-216ENST00000559496 GCFC2P16383 781 aaKnown RBP7.74□□□□□ -1.17
ZEB1-216ENST00000559496 POLR2BP30876 1174 aaKnown RBP7.74□□□□□ -1.17
ZEB1-216ENST00000559496 TRHRP34981 398 aaPredicted RBP7.74□□□□□ -1.17
ZEB1-216ENST00000559496 SREBF1P36956 1147 aa7.74□□□□□ -1.17
ZEB1-216ENST00000559496 RAP1GAPP47736 663 aa7.74□□□□□ -1.17
ZEB1-216ENST00000559496 NDUFA8P51970 172 aa7.74□□□□□ -1.17
ZEB1-216ENST00000559496 GRIN1Q05586 938 aa7.74□□□□□ -1.17
ZEB1-216ENST00000559496 PABPC4Q13310 644 aaKnown RBP eCLIP7.74□□□□□ -1.17
ZEB1-216ENST00000559496 PLS1Q14651 629 aa7.74□□□□□ -1.17
ZEB1-216ENST00000559496 TMEM132BQ14DG7 1078 aa7.74□□□□□ -1.17
ZEB1-216ENST00000559496 PPP2R5AQ15172 486 aa7.74□□□□□ -1.17
ZEB1-216ENST00000559496 RESP18Q5W5W9 173 aa7.74□□□□□ -1.17
ZEB1-216ENST00000559496 SNRNP48Q6IEG0 339 aaKnown RBP7.74□□□□□ -1.17
ZEB1-216ENST00000559496 RNF111Q6ZNA4 994 aa7.74□□□□□ -1.17
ZEB1-216ENST00000559496 MB21D1Q8N884 522 aa7.74□□□□□ -1.17
ZEB1-216ENST00000559496 C4orf32Q8N8J7 132 aa7.74□□□□□ -1.17
ZEB1-216ENST00000559496 CLEC4DQ8WXI8 215 aa7.74□□□□□ -1.17
ZEB1-216ENST00000559496 TBC1D5Q92609 795 aa7.74□□□□□ -1.17
ZEB1-216ENST00000559496 P2RX7Q99572 595 aaKnown RBP7.74□□□□□ -1.17
ZEB1-216ENST00000559496 TEX13BQ9BXU2 312 aa7.74□□□□□ -1.17
ZEB1-216ENST00000559496 HDAC8Q9BY41 377 aa7.74□□□□□ -1.17
ZEB1-216ENST00000559496 UBXN6Q9BZV1 441 aa7.74□□□□□ -1.17
ZEB1-216ENST00000559496 CSRNP2Q9H175 543 aa7.74□□□□□ -1.17
ZEB1-216ENST00000559496 NUP62CLQ9H1M0 184 aa7.74□□□□□ -1.17
ZEB1-216ENST00000559496 TMEM60Q9H2L4 133 aa7.74□□□□□ -1.17
ZEB1-216ENST00000559496 TTC12Q9H892 705 aaPredicted RBP7.74□□□□□ -1.17
ZEB1-216ENST00000559496 METTL5Q9NRN9 209 aaKnown RBP7.74□□□□□ -1.17
ZEB1-216ENST00000559496 RNF146Q9NTX7 359 aa7.74□□□□□ -1.17
ZEB1-216ENST00000559496 ZNF214Q9UL59 606 aaPredicted RBP7.74□□□□□ -1.17
ZEB1-216ENST00000559496 RBBP6Q7Z6E9 1792 aaKnown RBP7.74□□□□□ -1.17
ZEB1-216ENST00000559496 MEIS3P2A8K0S8 358 aa7.73□□□□□ -1.17
ZEB1-216ENST00000559496 ATP2A1O14983 1001 aa7.73□□□□□ -1.17
ZEB1-216ENST00000559496 SLC37A4O43826 429 aa7.73□□□□□ -1.17
ZEB1-216ENST00000559496 EDIL3O43854 480 aa7.73□□□□□ -1.17
ZEB1-216ENST00000559496 CLEC3AO75596 197 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms