RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 FNIP2Q9P278 1114 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 MUTYHQ9UIF7 546 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 UBQLN1Q9UMX0 589 aaKnown RBP8.92□□□□□ -0.98
SNX1-207ENST00000559401 PCDHA7Q9UN72 937 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 NR2E1Q9Y466 385 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 ANK1P16157 1881 aa8.91□□□□□ -0.98
SNX1-207ENST00000559401 A0A0B4J269 797 aa8.91□□□□□ -0.98
SNX1-207ENST00000559401 CCDC195A0A1B0GUA6 201 aa8.91□□□□□ -0.98
SNX1-207ENST00000559401 TTC26A0AVF1 554 aa8.91□□□□□ -0.98
SNX1-207ENST00000559401 LACTBL1A8MY62 500 aa8.91□□□□□ -0.98
SNX1-207ENST00000559401 LOC730098B7Z3J9 87 aa8.91□□□□□ -0.98
SNX1-207ENST00000559401 PI4K2BG5E9Z4 385 aa8.91□□□□□ -0.98
SNX1-207ENST00000559401 MEFVO15553 781 aaPredicted RBP8.91□□□□□ -0.98
SNX1-207ENST00000559401 RFPL2O75678 378 aa8.91□□□□□ -0.98
SNX1-207ENST00000559401 IGFBP6P24592 240 aaPredicted RBP8.91□□□□□ -0.98
SNX1-207ENST00000559401 RPL9P32969 192 aaKnown RBP8.91□□□□□ -0.98
SNX1-207ENST00000559401 OR1D2P34982 312 aa8.91□□□□□ -0.98
SNX1-207ENST00000559401 ARPP19P56211 112 aa8.91□□□□□ -0.98
SNX1-207ENST00000559401 ALCAMQ13740 583 aa8.91□□□□□ -0.98
SNX1-207ENST00000559401 ENOX2Q16206 610 aaKnown RBP8.91□□□□□ -0.98
SNX1-207ENST00000559401 TMEM31Q5JXX7 168 aa8.91□□□□□ -0.98
SNX1-207ENST00000559401 AXDND1Q5T1B0 1012 aaPredicted RBP8.91□□□□□ -0.98
SNX1-207ENST00000559401 L1TD1Q5T7N2 865 aaKnown RBP8.91□□□□□ -0.98
SNX1-207ENST00000559401 CCDC149Q6ZUS6 474 aa8.91□□□□□ -0.98
SNX1-207ENST00000559401 ANKS3Q6ZW76 656 aa8.91□□□□□ -0.98
SNX1-207ENST00000559401 STXBP4Q6ZWJ1 553 aa8.91□□□□□ -0.98
SNX1-207ENST00000559401 CEP57L1Q8IYX8 460 aa8.91□□□□□ -0.98
SNX1-207ENST00000559401 TDRD5Q8NAT2 981 aaKnown RBP8.91□□□□□ -0.98
SNX1-207ENST00000559401 KREMEN2Q8NCW0 462 aa8.91□□□□□ -0.98
SNX1-207ENST00000559401 LNX1Q8TBB1 728 aaPredicted RBP8.91□□□□□ -0.98
SNX1-207ENST00000559401 FEZF2Q8TBJ5 459 aa8.91□□□□□ -0.98
SNX1-207ENST00000559401 SMG7Q92540 1137 aaKnown RBP8.91□□□□□ -0.98
SNX1-207ENST00000559401 CLSTN3Q9BQT9 956 aa8.91□□□□□ -0.98
SNX1-207ENST00000559401 ST6GALNAC4Q9H4F1 302 aa8.91□□□□□ -0.98
SNX1-207ENST00000559401 PLEKHA4Q9H4M7 779 aa8.91□□□□□ -0.98
SNX1-207ENST00000559401 OLFML3Q9NRN5 406 aa8.91□□□□□ -0.98
SNX1-207ENST00000559401 AGO2Q9UKV8 859 aaKnown RBP8.91□□□□□ -0.98
SNX1-207ENST00000559401 PCDHB13Q9Y5F0 798 aa8.91□□□□□ -0.98
SNX1-207ENST00000559401 ATP6V1DQ9Y5K8 247 aa8.91□□□□□ -0.98
SNX1-207ENST00000559401 CDY1Q9Y6F8 540 aa8.91□□□□□ -0.98
SNX1-207ENST00000559401 TCHHQ07283 1943 aa8.91□□□□□ -0.98
SNX1-207ENST00000559401 SPTBN5Q9NRC6 3674 aaKnown RBP8.91□□□□□ -0.98
SNX1-207ENST00000559401 XIRP2A4UGR9 3374 aa8.9□□□□□ -0.98
SNX1-207ENST00000559401 PRPF6O94906 941 aaKnown RBP8.9□□□□□ -0.98
SNX1-207ENST00000559401 FGFR3P22607 806 aa8.9□□□□□ -0.98
SNX1-207ENST00000559401 AFMP43652 599 aa8.9□□□□□ -0.98
SNX1-207ENST00000559401 GUCY2FP51841 1108 aa8.9□□□□□ -0.98
SNX1-207ENST00000559401 CASP5P51878 434 aa8.9□□□□□ -0.98
SNX1-207ENST00000559401 KCNA1Q09470 495 aa8.9□□□□□ -0.98
SNX1-207ENST00000559401 TMEM132DQ14C87 1099 aa8.9□□□□□ -0.98
SNX1-207ENST00000559401 POSTNQ15063 836 aa8.9□□□□□ -0.98
SNX1-207ENST00000559401 E2F4Q16254 413 aa8.9□□□□□ -0.98
SNX1-207ENST00000559401 PPM1LQ5SGD2 360 aa8.9□□□□□ -0.98
SNX1-207ENST00000559401 VARS2Q5ST30 1063 aaKnown RBP8.9□□□□□ -0.98
SNX1-207ENST00000559401 RESP18Q5W5W9 173 aa8.9□□□□□ -0.98
SNX1-207ENST00000559401 JADE1Q6IE81 842 aa8.9□□□□□ -0.98
SNX1-207ENST00000559401 DSTYKQ6XUX3 929 aa8.9□□□□□ -0.98
SNX1-207ENST00000559401 C15orf39Q6ZRI6 1047 aa8.9□□□□□ -0.98
SNX1-207ENST00000559401 GPR149Q86SP6 731 aa8.9□□□□□ -0.98
SNX1-207ENST00000559401 CD302Q8IX05 232 aa8.9□□□□□ -0.98
SNX1-207ENST00000559401 GPR65Q8IYL9 337 aa8.9□□□□□ -0.98
SNX1-207ENST00000559401 TMEM130Q8N3G9 435 aa8.9□□□□□ -0.98
SNX1-207ENST00000559401 BEST2Q8NFU1 509 aa8.9□□□□□ -0.98
SNX1-207ENST00000559401 KCNN1Q92952 543 aa8.9□□□□□ -0.98
SNX1-207ENST00000559401 HPS3Q969F9 1004 aa8.9□□□□□ -0.98
SNX1-207ENST00000559401 ACSF2Q96CM8 615 aaPredicted RBP8.9□□□□□ -0.98
SNX1-207ENST00000559401 SAAL1Q96ER3 474 aa8.9□□□□□ -0.98
SNX1-207ENST00000559401 CHAMP1Q96JM3 812 aa8.9□□□□□ -0.98
SNX1-207ENST00000559401 PYM1Q9BRP8 204 aaKnown RBP8.9□□□□□ -0.98
SNX1-207ENST00000559401 FAM213AQ9BRX8 229 aa8.9□□□□□ -0.98
SNX1-207ENST00000559401 TRIM9Q9C026 710 aa8.9□□□□□ -0.98
SNX1-207ENST00000559401 BLZF1Q9H2G9 400 aa8.9□□□□□ -0.98
SNX1-207ENST00000559401 MAGEF1Q9HAY2 307 aa8.9□□□□□ -0.98
SNX1-207ENST00000559401 KBTBD4Q9NVX7 518 aa8.9□□□□□ -0.98
SNX1-207ENST00000559401 MTRRQ9UBK8 725 aa8.9□□□□□ -0.98
SNX1-207ENST00000559401 CPSF3Q9UKF6 684 aaKnown RBP8.9□□□□□ -0.98
SNX1-207ENST00000559401 POLIQ9UNA4 740 aa8.9□□□□□ -0.98
SNX1-207ENST00000559401 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.9□□□□□ -0.98
SNX1-207ENST00000559401 CLUHO75153 1309 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 FRMD3A2A2Y4 597 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 GOLGA8IPA6NC78 632 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 GOLGA8JA6NMD2 632 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 C2CD4DB7Z1M9 353 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 H7C4K7 107 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 SYN3O14994 580 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 ADAM12O43184 909 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 FAM189A1O60320 539 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 ZMYND10O75800 440 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 PPP1R37O75864 691 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 C8AP07357 584 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 NFICP08651 508 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 CASP1P29466 404 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 GBP2P32456 591 aaPredicted RBP8.89□□□□□ -0.99
SNX1-207ENST00000559401 ELF1P32519 619 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 CTXN3Q4LDR2 81 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 FAM26FQ5R3K3 315 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 ZNF280DQ6N043 979 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 ARMCX5Q6P1M9 558 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 LILRA6Q6PI73 481 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 CD300LGQ6UXG3 332 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms