RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 HDAC7Q8WUI4 952 aa11.93□□□□□ -0.5
SPG11-216ENST00000559347 STAMQ92783 540 aa11.93□□□□□ -0.5
SPG11-216ENST00000559347 DDX27Q96GQ7 796 aaKnown RBP11.93□□□□□ -0.5
SPG11-216ENST00000559347 CLSTN3Q9BQT9 956 aa11.93□□□□□ -0.5
SPG11-216ENST00000559347 MSTO1Q9BUK6 570 aa11.93□□□□□ -0.5
SPG11-216ENST00000559347 FGFBP2Q9BYJ0 223 aa11.93□□□□□ -0.5
SPG11-216ENST00000559347 IKZF4Q9H2S9 585 aa11.93□□□□□ -0.5
SPG11-216ENST00000559347 MRPL44Q9H9J2 332 aaKnown RBP11.93□□□□□ -0.5
SPG11-216ENST00000559347 PLEKHA5Q9HAU0 1116 aa11.93□□□□□ -0.5
SPG11-216ENST00000559347 KBTBD4Q9NVX7 518 aa11.93□□□□□ -0.5
SPG11-216ENST00000559347 TBC1D7Q9P0N9 293 aa11.93□□□□□ -0.5
SPG11-216ENST00000559347 MTRRQ9UBK8 725 aa11.93□□□□□ -0.5
SPG11-216ENST00000559347 MUTYHQ9UIF7 546 aa11.93□□□□□ -0.5
SPG11-216ENST00000559347 CPSF3Q9UKF6 684 aaKnown RBP11.93□□□□□ -0.5
SPG11-216ENST00000559347 PCDHA7Q9UN72 937 aa11.93□□□□□ -0.5
SPG11-216ENST00000559347 ZDHHC9Q9Y397 364 aa11.93□□□□□ -0.5
SPG11-216ENST00000559347 STYXL1Q9Y6J8 313 aa11.93□□□□□ -0.5
SPG11-216ENST00000559347 I3L4J1 428 aa11.92□□□□□ -0.5
SPG11-216ENST00000559347 TRAPPC3O43617 180 aa11.92□□□□□ -0.5
SPG11-216ENST00000559347 RFPL2O75678 378 aa11.92□□□□□ -0.5
SPG11-216ENST00000559347 GCNT3O95395 438 aa11.92□□□□□ -0.5
SPG11-216ENST00000559347 PAPLNO95428 1278 aa11.92□□□□□ -0.5
SPG11-216ENST00000559347 ADRB2P07550 413 aa11.92□□□□□ -0.5
SPG11-216ENST00000559347 MYBP10242 640 aa11.92□□□□□ -0.5
SPG11-216ENST00000559347 ALADP13716 330 aa11.92□□□□□ -0.5
SPG11-216ENST00000559347 RPL9P32969 192 aaKnown RBP11.92□□□□□ -0.5
SPG11-216ENST00000559347 ME1P48163 572 aa11.92□□□□□ -0.5
SPG11-216ENST00000559347 SPAG1Q07617 926 aa11.92□□□□□ -0.5
SPG11-216ENST00000559347 KCNA1Q09470 495 aa11.92□□□□□ -0.5
SPG11-216ENST00000559347 L1TD1Q5T7N2 865 aaKnown RBP11.92□□□□□ -0.5
SPG11-216ENST00000559347 RESP18Q5W5W9 173 aa11.92□□□□□ -0.5
SPG11-216ENST00000559347 LILRA6Q6PI73 481 aa11.92□□□□□ -0.5
SPG11-216ENST00000559347 ELMSAN1Q6PJG2 1045 aa11.92□□□□□ -0.5
SPG11-216ENST00000559347 PALB2Q86YC2 1186 aa11.92□□□□□ -0.5
SPG11-216ENST00000559347 PIP4P2Q8N4L2 257 aa11.92□□□□□ -0.5
SPG11-216ENST00000559347 DHX58Q96C10 678 aa11.92□□□□□ -0.5
SPG11-216ENST00000559347 KIF12Q96FN5 646 aa11.92□□□□□ -0.5
SPG11-216ENST00000559347 TRIM9Q9C026 710 aa11.92□□□□□ -0.5
SPG11-216ENST00000559347 PANK4Q9NVE7 773 aa11.92□□□□□ -0.5
SPG11-216ENST00000559347 DPP7Q9UHL4 492 aa11.92□□□□□ -0.5
SPG11-216ENST00000559347 FBXW11Q9UKB1 542 aa11.92□□□□□ -0.5
SPG11-216ENST00000559347 CFAP45Q9UL16 551 aa11.92□□□□□ -0.5
SPG11-216ENST00000559347 NR2E1Q9Y466 385 aa11.92□□□□□ -0.5
SPG11-216ENST00000559347 NOTCH4Q99466 2003 aa11.92□□□□□ -0.5
SPG11-216ENST00000559347 TECTAO75443 2155 aa11.92□□□□□ -0.5
SPG11-216ENST00000559347 FAM86C2PA6NEL3 165 aa11.91□□□□□ -0.5
SPG11-216ENST00000559347 LACTBL1A8MY62 500 aa11.91□□□□□ -0.5
SPG11-216ENST00000559347 C2CD4DB7Z1M9 353 aa11.91□□□□□ -0.5
SPG11-216ENST00000559347 ADAM12O43184 909 aa11.91□□□□□ -0.5
SPG11-216ENST00000559347 GPR37L1O60883 481 aa11.91□□□□□ -0.5
SPG11-216ENST00000559347 SPATA31D3P0C874 917 aa11.91□□□□□ -0.5
SPG11-216ENST00000559347 LRPAP1P30533 357 aa11.91□□□□□ -0.5
SPG11-216ENST00000559347 ALCAMQ13740 583 aa11.91□□□□□ -0.5
SPG11-216ENST00000559347 ZBTB6Q15916 424 aa11.91□□□□□ -0.5
SPG11-216ENST00000559347 ATAT1Q5SQI0 421 aa11.91□□□□□ -0.5
SPG11-216ENST00000559347 ADALQ6DHV7 355 aa11.91□□□□□ -0.5
SPG11-216ENST00000559347 SLFN12LQ6IEE8 588 aa11.91□□□□□ -0.5
SPG11-216ENST00000559347 SPATA31D4Q6ZUB0 917 aa11.91□□□□□ -0.5
SPG11-216ENST00000559347 CCDC149Q6ZUS6 474 aa11.91□□□□□ -0.5
SPG11-216ENST00000559347 CCDC65Q8IXS2 484 aa11.91□□□□□ -0.5
SPG11-216ENST00000559347 IQUBQ8NA54 791 aa11.91□□□□□ -0.5
SPG11-216ENST00000559347 KREMEN2Q8NCW0 462 aa11.91□□□□□ -0.5
SPG11-216ENST00000559347 ZNF707Q96C28 371 aaPredicted RBP11.91□□□□□ -0.5
SPG11-216ENST00000559347 SUSD3Q96L08 255 aa11.91□□□□□ -0.5
SPG11-216ENST00000559347 RHOBTB2Q9BYZ6 727 aa11.91□□□□□ -0.5
SPG11-216ENST00000559347 PLEKHA4Q9H4M7 779 aa11.91□□□□□ -0.5
SPG11-216ENST00000559347 RPF1Q9H9Y2 349 aaKnown RBP11.91□□□□□ -0.5
SPG11-216ENST00000559347 MAGEF1Q9HAY2 307 aa11.91□□□□□ -0.5
SPG11-216ENST00000559347 TSHZ2Q9NRE2 1034 aa11.91□□□□□ -0.5
SPG11-216ENST00000559347 ZDHHC7Q9NXF8 308 aa11.91□□□□□ -0.5
SPG11-216ENST00000559347 RCOR1Q9UKL0 485 aa11.91□□□□□ -0.5
SPG11-216ENST00000559347 AGO2Q9UKV8 859 aaKnown RBP11.91□□□□□ -0.5
SPG11-216ENST00000559347 UBQLN1Q9UMX0 589 aaKnown RBP11.91□□□□□ -0.5
SPG11-216ENST00000559347 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.91□□□□□ -0.5
SPG11-216ENST00000559347 MYO10Q9HD67 2058 aa11.91□□□□□ -0.5
SPG11-216ENST00000559347 CCDC195A0A1B0GUA6 201 aa11.9□□□□□ -0.5
SPG11-216ENST00000559347 SYN3O14994 580 aa11.9□□□□□ -0.5
SPG11-216ENST00000559347 POLR2DO15514 142 aaKnown RBP11.9□□□□□ -0.5
SPG11-216ENST00000559347 XPOTO43592 962 aaKnown RBP11.9□□□□□ -0.5
SPG11-216ENST00000559347 NFICP08651 508 aa11.9□□□□□ -0.5
SPG11-216ENST00000559347 CYP3A5P20815 502 aa11.9□□□□□ -0.5
SPG11-216ENST00000559347 ADSSP30520 456 aa11.9□□□□□ -0.5
SPG11-216ENST00000559347 MCM4P33991 863 aa11.9□□□□□ -0.5
SPG11-216ENST00000559347 ACOT2P49753 483 aa11.9□□□□□ -0.5
SPG11-216ENST00000559347 TMEM31Q5JXX7 168 aa11.9□□□□□ -0.5
SPG11-216ENST00000559347 JADE1Q6IE81 842 aa11.9□□□□□ -0.5
SPG11-216ENST00000559347 CNNM4Q6P4Q7 775 aa11.9□□□□□ -0.5
SPG11-216ENST00000559347 RSPO2Q6UXX9 243 aaPredicted RBP11.9□□□□□ -0.5
SPG11-216ENST00000559347 ANKS3Q6ZW76 656 aa11.9□□□□□ -0.5
SPG11-216ENST00000559347 CD302Q8IX05 232 aa11.9□□□□□ -0.5
SPG11-216ENST00000559347 TDRD5Q8NAT2 981 aaKnown RBP11.9□□□□□ -0.5
SPG11-216ENST00000559347 GLIS3Q8NEA6 775 aa11.9□□□□□ -0.5
SPG11-216ENST00000559347 POMGNT1Q8WZA1 660 aa11.9□□□□□ -0.5
SPG11-216ENST00000559347 CHAMP1Q96JM3 812 aa11.9□□□□□ -0.5
SPG11-216ENST00000559347 ACCSQ96QU6 501 aa11.9□□□□□ -0.5
SPG11-216ENST00000559347 TSPAN18Q96SJ8 248 aa11.9□□□□□ -0.5
SPG11-216ENST00000559347 LRFN3Q9BTN0 628 aa11.9□□□□□ -0.5
SPG11-216ENST00000559347 LRRC27Q9C0I9 530 aa11.9□□□□□ -0.5
SPG11-216ENST00000559347 FAM13BQ9NYF5 915 aa11.9□□□□□ -0.5
SPG11-216ENST00000559347 EXOC7Q9UPT5 735 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms