RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 ATP1A3P13637 1013 aa16.02■□□□□ 0.16
SNRPA1-207ENST00000559309 PRKCSHP14314 528 aaPredicted RBP16.02■□□□□ 0.16
SNRPA1-207ENST00000559309 AARSP49588 968 aaKnown RBP eCLIP16.02■□□□□ 0.16
SNRPA1-207ENST00000559309 SPAG1Q07617 926 aa16.02■□□□□ 0.16
SNRPA1-207ENST00000559309 KCNJ12Q14500 433 aa16.02■□□□□ 0.16
SNRPA1-207ENST00000559309 UPP1Q16831 310 aa16.02■□□□□ 0.16
SNRPA1-207ENST00000559309 DUOXA2Q1HG44 320 aa16.02■□□□□ 0.16
SNRPA1-207ENST00000559309 USP37Q86T82 979 aa16.02■□□□□ 0.16
SNRPA1-207ENST00000559309 TMEM130Q8N3G9 435 aa16.02■□□□□ 0.16
SNRPA1-207ENST00000559309 URGCPQ8TCY9 931 aa16.02■□□□□ 0.16
SNRPA1-207ENST00000559309 CCDC127Q96BQ5 260 aa16.02■□□□□ 0.16
SNRPA1-207ENST00000559309 KIF12Q96FN5 646 aa16.02■□□□□ 0.16
SNRPA1-207ENST00000559309 FAM84AQ96KN4 292 aa16.02■□□□□ 0.16
SNRPA1-207ENST00000559309 UROC1Q96N76 676 aa16.02■□□□□ 0.16
SNRPA1-207ENST00000559309 RPS6KC1Q96S38 1066 aa16.02■□□□□ 0.16
SNRPA1-207ENST00000559309 VRTNQ9H8Y1 702 aa16.02■□□□□ 0.16
SNRPA1-207ENST00000559309 TMEM8AQ9HCN3 771 aa16.02■□□□□ 0.16
SNRPA1-207ENST00000559309 MRPL42Q9Y6G3 142 aaKnown RBP16.02■□□□□ 0.16
SNRPA1-207ENST00000559309 SCN1AP35498 2009 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 LINC01553A4QN01 128 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 P4HA2O15460 535 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 ARHGEF15O94989 841 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 GALTP07902 379 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 TRIM49P0CI25 452 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 TRIM49CP0CI26 452 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 KRT13P13646 458 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 RPL9P32969 192 aaKnown RBP16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 SMAD3P84022 425 aaKnown RBP16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 KRT31Q15323 416 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 MAN2A1Q16706 1144 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 CCDC40Q4G0X9 1142 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 CBWD6Q4V339 395 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 CBWD3Q5JTY5 395 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 CBWD5Q5RIA9 395 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 TDRD10Q5VZ19 366 aaKnown RBP16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 DPY19L2P1Q6NXN4 242 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 SV2AQ7L0J3 742 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 TRAPPC11Q7Z392 1133 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 LIMS2Q7Z4I7 341 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 RNF168Q8IYW5 571 aaPredicted RBP16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 ABI1Q8IZP0 508 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 LMO3Q8TAP4 145 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 FNBP1Q96RU3 617 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 YME1L1Q96TA2 773 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 PAAF1Q9BRP4 392 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 PBX4Q9BYU1 374 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 MTMR12Q9C0I1 747 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 XYLT2Q9H1B5 865 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 RBSNQ9H1K0 784 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 GOLGA2P5Q9HBQ8 144 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 DNAJB4Q9UDY4 337 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 ITGA11Q9UKX5 1188 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 INPP5FQ9Y2H2 1132 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 YBX2Q9Y2T7 364 aaKnown RBP16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 CHD7Q9P2D1 2997 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 VCANP13611 3396 aa16.01■□□□□ 0.15
SNRPA1-207ENST00000559309 CARNS1A5YM72 827 aa16■□□□□ 0.15
SNRPA1-207ENST00000559309 C5orf67F2Z3F1 127 aa16■□□□□ 0.15
SNRPA1-207ENST00000559309 XPOTO43592 962 aaKnown RBP16■□□□□ 0.15
SNRPA1-207ENST00000559309 TLL1O43897 1013 aa16■□□□□ 0.15
SNRPA1-207ENST00000559309 DLATP10515 647 aaKnown RBP16■□□□□ 0.15
SNRPA1-207ENST00000559309 IGFBP6P24592 240 aaPredicted RBP16■□□□□ 0.15
SNRPA1-207ENST00000559309 FMO5P49326 533 aa16■□□□□ 0.15
SNRPA1-207ENST00000559309 KCNH2Q12809 1159 aa16■□□□□ 0.15
SNRPA1-207ENST00000559309 BTG3Q14201 252 aaPredicted RBP16■□□□□ 0.15
SNRPA1-207ENST00000559309 TPD52L1Q16890 204 aaPredicted RBP16■□□□□ 0.15
SNRPA1-207ENST00000559309 C9orf57Q5W0N0 161 aa16■□□□□ 0.15
SNRPA1-207ENST00000559309 LMBRD2Q68DH5 695 aaPredicted RBP16■□□□□ 0.15
SNRPA1-207ENST00000559309 KRT39Q6A163 491 aa16■□□□□ 0.15
SNRPA1-207ENST00000559309 FAM117BQ6P1L5 589 aa16■□□□□ 0.15
SNRPA1-207ENST00000559309 C3orf58Q8NDZ4 430 aa16■□□□□ 0.15
SNRPA1-207ENST00000559309 BEST2Q8NFU1 509 aa16■□□□□ 0.15
SNRPA1-207ENST00000559309 CACTINQ8WUQ7 758 aaKnown RBP16■□□□□ 0.15
SNRPA1-207ENST00000559309 TUBGCP2Q9BSJ2 902 aa16■□□□□ 0.15
SNRPA1-207ENST00000559309 MARCH5Q9NX47 278 aa16■□□□□ 0.15
SNRPA1-207ENST00000559309 DPP3Q9NY33 737 aa16■□□□□ 0.15
SNRPA1-207ENST00000559309 TSC2P49815 1807 aa15.99■□□□□ 0.15
SNRPA1-207ENST00000559309 GTPBP10A4D1E9 387 aaKnown RBP15.99■□□□□ 0.15
SNRPA1-207ENST00000559309 PPEF2O14830 753 aa15.99■□□□□ 0.15
SNRPA1-207ENST00000559309 STX10O60499 249 aa15.99■□□□□ 0.15
SNRPA1-207ENST00000559309 CST3P01034 146 aaPredicted RBP15.99■□□□□ 0.15
SNRPA1-207ENST00000559309 TNNI1P19237 187 aa15.99■□□□□ 0.15
SNRPA1-207ENST00000559309 GCLMP48507 274 aa15.99■□□□□ 0.15
SNRPA1-207ENST00000559309 SLC11A1P49279 550 aa15.99■□□□□ 0.15
SNRPA1-207ENST00000559309 CLCNKBP51801 687 aa15.99■□□□□ 0.15
SNRPA1-207ENST00000559309 GUCY2FP51841 1108 aa15.99■□□□□ 0.15
SNRPA1-207ENST00000559309 RABGGTBP53611 331 aa15.99■□□□□ 0.15
SNRPA1-207ENST00000559309 EPC2Q52LR7 807 aa15.99■□□□□ 0.15
SNRPA1-207ENST00000559309 LRRC52Q8N7C0 313 aa15.99■□□□□ 0.15
SNRPA1-207ENST00000559309 FAM212AQ96EL1 285 aa15.99■□□□□ 0.15
SNRPA1-207ENST00000559309 DDX27Q96GQ7 796 aaKnown RBP15.99■□□□□ 0.15
SNRPA1-207ENST00000559309 ANKRD36BP1Q96IX9 119 aa15.99■□□□□ 0.15
SNRPA1-207ENST00000559309 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.99■□□□□ 0.15
SNRPA1-207ENST00000559309 A0A1B0GTH6 734 aa15.98■□□□□ 0.15
SNRPA1-207ENST00000559309 BECN2A8MW95 431 aa15.98■□□□□ 0.15
SNRPA1-207ENST00000559309 NRP1O14786 923 aa15.98■□□□□ 0.15
SNRPA1-207ENST00000559309 AFPP02771 609 aaKnown RBP15.98■□□□□ 0.15
SNRPA1-207ENST00000559309 TMEM191BP0C7N4 346 aa15.98■□□□□ 0.15
SNRPA1-207ENST00000559309 MYOGP15173 224 aa15.98■□□□□ 0.15
SNRPA1-207ENST00000559309 PAX3P23760 479 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms