RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 LMAN2LQ9H0V9 348 aa12.42□□□□□ -0.42
SNX1-204ENST00000559061 PRDM6Q9NQX0 595 aa12.42□□□□□ -0.42
SNX1-204ENST00000559061 TLR9Q9NR96 1032 aa12.42□□□□□ -0.42
SNX1-204ENST00000559061 RBAKQ9NYW8 714 aaPredicted RBP12.42□□□□□ -0.42
SNX1-204ENST00000559061 LMCD1Q9NZU5 365 aa12.42□□□□□ -0.42
SNX1-204ENST00000559061 SIX4Q9UIU6 781 aa12.42□□□□□ -0.42
SNX1-204ENST00000559061 PODXLO00592 558 aa12.41□□□□□ -0.42
SNX1-204ENST00000559061 PIRO00625 290 aa12.41□□□□□ -0.42
SNX1-204ENST00000559061 AKAP3O75969 853 aa12.41□□□□□ -0.42
SNX1-204ENST00000559061 GLP2RO95838 553 aa12.41□□□□□ -0.42
SNX1-204ENST00000559061 CTSAP10619 480 aa12.41□□□□□ -0.42
SNX1-204ENST00000559061 AARSP49588 968 aaKnown RBP eCLIP12.41□□□□□ -0.42
SNX1-204ENST00000559061 MCCD1P59942 119 aaPredicted RBP12.41□□□□□ -0.42
SNX1-204ENST00000559061 HYAL1Q12794 435 aa12.41□□□□□ -0.42
SNX1-204ENST00000559061 KCNC3Q14003 757 aa12.41□□□□□ -0.42
SNX1-204ENST00000559061 PSMD6Q15008 389 aa12.41□□□□□ -0.42
SNX1-204ENST00000559061 PTPN14Q15678 1187 aa12.41□□□□□ -0.42
SNX1-204ENST00000559061 RTP2Q5QGT7 225 aa12.41□□□□□ -0.42
SNX1-204ENST00000559061 KIAA0319Q5VV43 1072 aa12.41□□□□□ -0.42
SNX1-204ENST00000559061 PLPP4Q5VZY2 271 aa12.41□□□□□ -0.42
SNX1-204ENST00000559061 ANKRD40Q6AI12 368 aa12.41□□□□□ -0.42
SNX1-204ENST00000559061 TTI2Q6NXR4 508 aa12.41□□□□□ -0.42
SNX1-204ENST00000559061 VPS52Q8N1B4 723 aa12.41□□□□□ -0.42
SNX1-204ENST00000559061 C1orf127Q8N9H9 656 aa12.41□□□□□ -0.42
SNX1-204ENST00000559061 XXYLT1Q8NBI6 393 aa12.41□□□□□ -0.42
SNX1-204ENST00000559061 RDH13Q8NBN7 331 aa12.41□□□□□ -0.42
SNX1-204ENST00000559061 FAM212AQ96EL1 285 aa12.41□□□□□ -0.42
SNX1-204ENST00000559061 EEF2KMTQ96G04 330 aa12.41□□□□□ -0.42
SNX1-204ENST00000559061 GAS2L1Q99501 681 aaPredicted RBP12.41□□□□□ -0.42
SNX1-204ENST00000559061 POP1Q99575 1024 aaKnown RBP12.41□□□□□ -0.42
SNX1-204ENST00000559061 DUSP9Q99956 384 aaKnown RBP12.41□□□□□ -0.42
SNX1-204ENST00000559061 TCF25Q9BQ70 676 aa12.41□□□□□ -0.42
SNX1-204ENST00000559061 ASB7Q9H672 318 aa12.41□□□□□ -0.42
SNX1-204ENST00000559061 CHST7Q9NS84 486 aa12.41□□□□□ -0.42
SNX1-204ENST00000559061 RMND1Q9NWS8 449 aa12.41□□□□□ -0.42
SNX1-204ENST00000559061 TMEM63CQ9P1W3 806 aa12.41□□□□□ -0.42
SNX1-204ENST00000559061 CGNQ9P2M7 1197 aaKnown RBP12.41□□□□□ -0.42
SNX1-204ENST00000559061 ADAM28Q9UKQ2 775 aa12.41□□□□□ -0.42
SNX1-204ENST00000559061 DERAQ9Y315 318 aa12.41□□□□□ -0.42
SNX1-204ENST00000559061 C2CD2Q9Y426 696 aa12.41□□□□□ -0.42
SNX1-204ENST00000559061 C2orf71A6NGG8 1288 aa12.4□□□□□ -0.42
SNX1-204ENST00000559061 KIAA0391O15091 583 aaKnown RBP12.4□□□□□ -0.42
SNX1-204ENST00000559061 LINC01565O15544 149 aa12.4□□□□□ -0.42
SNX1-204ENST00000559061 IL18RAPO95256 599 aa12.4□□□□□ -0.42
SNX1-204ENST00000559061 SLC34A2O95436 690 aa12.4□□□□□ -0.42
SNX1-204ENST00000559061 SOD2P04179 222 aa12.4□□□□□ -0.42
SNX1-204ENST00000559061 CYP3A5P20815 502 aa12.4□□□□□ -0.42
SNX1-204ENST00000559061 DLG4P78352 724 aa12.4□□□□□ -0.42
SNX1-204ENST00000559061 CLDN10P78369 228 aa12.4□□□□□ -0.42
SNX1-204ENST00000559061 TMEM132DQ14C87 1099 aa12.4□□□□□ -0.42
SNX1-204ENST00000559061 CCDC85BQ15834 202 aaPredicted RBP12.4□□□□□ -0.42
SNX1-204ENST00000559061 TIGD5Q53EQ6 642 aa12.4□□□□□ -0.42
SNX1-204ENST00000559061 C9orf57Q5W0N0 161 aa12.4□□□□□ -0.42
SNX1-204ENST00000559061 HS2ST1Q7LGA3 356 aa12.4□□□□□ -0.42
SNX1-204ENST00000559061 CD302Q8IX05 232 aa12.4□□□□□ -0.42
SNX1-204ENST00000559061 MAFAQ8NHW3 353 aaPredicted RBP12.4□□□□□ -0.42
SNX1-204ENST00000559061 TMEM169Q96HH4 297 aa12.4□□□□□ -0.42
SNX1-204ENST00000559061 UROC1Q96N76 676 aa12.4□□□□□ -0.42
SNX1-204ENST00000559061 MTMR12Q9C0I1 747 aa12.4□□□□□ -0.42
SNX1-204ENST00000559061 NUP62CLQ9H1M0 184 aa12.4□□□□□ -0.42
SNX1-204ENST00000559061 SLC38A7Q9NVC3 462 aa12.4□□□□□ -0.42
SNX1-204ENST00000559061 UBQLN1Q9UMX0 589 aaKnown RBP12.4□□□□□ -0.42
SNX1-204ENST00000559061 UNC80Q8N2C7 3258 aa12.4□□□□□ -0.42
SNX1-204ENST00000559061 ZNF233A6NK53 670 aa12.39□□□□□ -0.43
SNX1-204ENST00000559061 LRRIQ3A6PVS8 624 aaPredicted RBP12.39□□□□□ -0.43
SNX1-204ENST00000559061 ADAM12O43184 909 aa12.39□□□□□ -0.43
SNX1-204ENST00000559061 B3GAT3O94766 335 aa12.39□□□□□ -0.43
SNX1-204ENST00000559061 LDHAP00338 332 aaKnown RBP12.39□□□□□ -0.43
SNX1-204ENST00000559061 FGFR3P22607 806 aa12.39□□□□□ -0.43
SNX1-204ENST00000559061 NR2F2P24468 414 aa12.39□□□□□ -0.43
SNX1-204ENST00000559061 TKTP29401 623 aaKnown RBP12.39□□□□□ -0.43
SNX1-204ENST00000559061 LTBRP36941 435 aa12.39□□□□□ -0.43
SNX1-204ENST00000559061 DSG1Q02413 1049 aa12.39□□□□□ -0.43
SNX1-204ENST00000559061 MYBPC2Q14324 1141 aa12.39□□□□□ -0.43
SNX1-204ENST00000559061 CTC1Q2NKJ3 1217 aa12.39□□□□□ -0.43
SNX1-204ENST00000559061 EDRF1Q3B7T1 1238 aa12.39□□□□□ -0.43
SNX1-204ENST00000559061 DPCR1Q3MIW9 517 aa12.39□□□□□ -0.43
SNX1-204ENST00000559061 DCLRE1AQ6PJP8 1040 aa12.39□□□□□ -0.43
SNX1-204ENST00000559061 RSPO2Q6UXX9 243 aaPredicted RBP12.39□□□□□ -0.43
SNX1-204ENST00000559061 MICALL1Q8N3F8 863 aa12.39□□□□□ -0.43
SNX1-204ENST00000559061 MRPL43Q8N983 215 aaKnown RBP12.39□□□□□ -0.43
SNX1-204ENST00000559061 GOLGA5Q8TBA6 731 aa12.39□□□□□ -0.43
SNX1-204ENST00000559061 NOC3LQ8WTT2 800 aaKnown RBP12.39□□□□□ -0.43
SNX1-204ENST00000559061 CCDC47Q96A33 483 aaKnown RBP12.39□□□□□ -0.43
SNX1-204ENST00000559061 CCDC34Q96HJ3 373 aa12.39□□□□□ -0.43
SNX1-204ENST00000559061 CGRRF1Q99675 332 aa12.39□□□□□ -0.43
SNX1-204ENST00000559061 COLEC11Q9BWP8 271 aa12.39□□□□□ -0.43
SNX1-204ENST00000559061 NSUN3Q9H649 340 aaKnown RBP12.39□□□□□ -0.43
SNX1-204ENST00000559061 INTS13Q9NVM9 706 aa12.39□□□□□ -0.43
SNX1-204ENST00000559061 HOOK1Q9UJC3 728 aaKnown RBP12.39□□□□□ -0.43
SNX1-204ENST00000559061 IRAK3Q9Y616 596 aa12.39□□□□□ -0.43
SNX1-204ENST00000559061 PER2O15055 1255 aa12.38□□□□□ -0.43
SNX1-204ENST00000559061 EXOC3O60645 756 aa12.38□□□□□ -0.43
SNX1-204ENST00000559061 TBX10O75333 385 aa12.38□□□□□ -0.43
SNX1-204ENST00000559061 CCNE1P24864 410 aa12.38□□□□□ -0.43
SNX1-204ENST00000559061 RPL9P32969 192 aaKnown RBP12.38□□□□□ -0.43
SNX1-204ENST00000559061 DLX2Q07687 328 aaPredicted RBP12.38□□□□□ -0.43
SNX1-204ENST00000559061 PTPROQ16827 1216 aa12.38□□□□□ -0.43
SNX1-204ENST00000559061 DUSP6Q16828 381 aa12.38□□□□□ -0.43
SNX1-204ENST00000559061 PRSS55Q6UWB4 352 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms