RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 INCENPQ9NQS7 918 aa7.2□□□□□ -1.26
LRRC28-209ENST00000558861 GPRC5DQ9NZD1 345 aa7.2□□□□□ -1.26
LRRC28-209ENST00000558861 STAP2Q9UGK3 403 aa7.2□□□□□ -1.26
LRRC28-209ENST00000558861 JAG2Q9Y219 1238 aa7.2□□□□□ -1.26
LRRC28-209ENST00000558861 AOX1Q06278 1338 aa7.2□□□□□ -1.26
LRRC28-209ENST00000558861 ADAMTSL1Q8N6G6 1762 aa7.19□□□□□ -1.26
LRRC28-209ENST00000558861 K7ESF4 209 aa7.19□□□□□ -1.26
LRRC28-209ENST00000558861 NFIBO00712 420 aa7.19□□□□□ -1.26
LRRC28-209ENST00000558861 ENO2P09104 434 aaPredicted RBP7.19□□□□□ -1.26
LRRC28-209ENST00000558861 UQCRFS1P1P0C7P4 283 aa7.19□□□□□ -1.26
LRRC28-209ENST00000558861 ATP5JP18859 108 aa7.19□□□□□ -1.26
LRRC28-209ENST00000558861 PRDX5P30044 214 aa7.19□□□□□ -1.26
LRRC28-209ENST00000558861 SCAND1P57086 179 aa7.19□□□□□ -1.26
LRRC28-209ENST00000558861 ADAM9Q13443 819 aa7.19□□□□□ -1.26
LRRC28-209ENST00000558861 RTP5Q14D33 572 aa7.19□□□□□ -1.26
LRRC28-209ENST00000558861 MFSD14BQ5SR56 506 aa7.19□□□□□ -1.26
LRRC28-209ENST00000558861 FRMD7Q6ZUT3 714 aa7.19□□□□□ -1.26
LRRC28-209ENST00000558861 CHD1LQ86WJ1 897 aa7.19□□□□□ -1.26
LRRC28-209ENST00000558861 SPATA5Q8NB90 893 aa7.19□□□□□ -1.26
LRRC28-209ENST00000558861 IGDCC4Q8TDY8 1250 aa7.19□□□□□ -1.26
LRRC28-209ENST00000558861 NEUROD6Q96NK8 337 aa7.19□□□□□ -1.26
LRRC28-209ENST00000558861 TUBGCP5Q96RT8 1024 aa7.19□□□□□ -1.26
LRRC28-209ENST00000558861 TAF1DQ9H5J8 278 aaPredicted RBP7.19□□□□□ -1.26
LRRC28-209ENST00000558861 DENND2AQ9ULE3 1009 aa7.19□□□□□ -1.26
LRRC28-209ENST00000558861 MT-CO1P00395 513 aa7.18□□□□□ -1.26
LRRC28-209ENST00000558861 GLRBP48167 497 aa7.18□□□□□ -1.26
LRRC28-209ENST00000558861 RGS3P49796 1198 aa7.18□□□□□ -1.26
LRRC28-209ENST00000558861 PDE1AP54750 535 aa7.18□□□□□ -1.26
LRRC28-209ENST00000558861 SLC6A3Q01959 620 aa7.18□□□□□ -1.26
LRRC28-209ENST00000558861 ALDH6A1Q02252 535 aaKnown RBP7.18□□□□□ -1.26
LRRC28-209ENST00000558861 ADCY1Q08828 1119 aa7.18□□□□□ -1.26
LRRC28-209ENST00000558861 MYBPC3Q14896 1274 aa7.18□□□□□ -1.26
LRRC28-209ENST00000558861 TTC38Q5R3I4 469 aa7.18□□□□□ -1.26
LRRC28-209ENST00000558861 ANKRD45Q5TZF3 282 aa7.18□□□□□ -1.26
LRRC28-209ENST00000558861 PRAMEF9Q5VWM5 478 aa7.18□□□□□ -1.26
LRRC28-209ENST00000558861 TSHZ3Q63HK5 1081 aa7.18□□□□□ -1.26
LRRC28-209ENST00000558861 TBC1D22AQ8WUA7 517 aa7.18□□□□□ -1.26
LRRC28-209ENST00000558861 EDC3Q96F86 508 aaKnown RBP7.18□□□□□ -1.26
LRRC28-209ENST00000558861 TMEM209Q96SK2 561 aa7.18□□□□□ -1.26
LRRC28-209ENST00000558861 FOXB1Q99853 325 aa7.18□□□□□ -1.26
LRRC28-209ENST00000558861 MYL10Q9BUA6 226 aa7.18□□□□□ -1.26
LRRC28-209ENST00000558861 MENTQ9BUN1 341 aa7.18□□□□□ -1.26
LRRC28-209ENST00000558861 MRIQ9BWK5 157 aa7.18□□□□□ -1.26
LRRC28-209ENST00000558861 PIH1D3Q9NQM4 214 aaKnown RBP7.18□□□□□ -1.26
LRRC28-209ENST00000558861 DLL4Q9NR61 685 aa7.18□□□□□ -1.26
LRRC28-209ENST00000558861 USP36Q9P275 1121 aaKnown RBP7.18□□□□□ -1.26
LRRC28-209ENST00000558861 PGAP2Q9UHJ9 254 aa7.18□□□□□ -1.26
LRRC28-209ENST00000558861 G3BP2Q9UN86 482 aaKnown RBP7.18□□□□□ -1.26
LRRC28-209ENST00000558861 PCDHAC2Q9Y5I4 1007 aa7.18□□□□□ -1.26
LRRC28-209ENST00000558861 GAKO14976 1311 aa7.18□□□□□ -1.26
LRRC28-209ENST00000558861 MYO3BQ8WXR4 1341 aa7.18□□□□□ -1.26
LRRC28-209ENST00000558861 ETV2O00321 342 aaPredicted RBP7.17□□□□□ -1.26
LRRC28-209ENST00000558861 APOL3O95236 402 aa7.17□□□□□ -1.26
LRRC28-209ENST00000558861 IFIT2P09913 472 aaKnown RBP7.17□□□□□ -1.26
LRRC28-209ENST00000558861 CLEC2LP0C7M8 214 aa7.17□□□□□ -1.26
LRRC28-209ENST00000558861 VEGFAP15692 232 aaPredicted RBP7.17□□□□□ -1.26
LRRC28-209ENST00000558861 MMP14P50281 582 aa7.17□□□□□ -1.26
LRRC28-209ENST00000558861 MESP2Q0VG99 397 aa7.17□□□□□ -1.26
LRRC28-209ENST00000558861 FAPQ12884 760 aa7.17□□□□□ -1.26
LRRC28-209ENST00000558861 CHAF1AQ13111 956 aaPredicted RBP7.17□□□□□ -1.26
LRRC28-209ENST00000558861 KLF1Q13351 362 aaPredicted RBP7.17□□□□□ -1.26
LRRC28-209ENST00000558861 SMAD4Q13485 552 aaKnown RBP7.17□□□□□ -1.26
LRRC28-209ENST00000558861 TTF1Q15361 905 aaPredicted RBP7.17□□□□□ -1.26
LRRC28-209ENST00000558861 INAVAQ3KP66 663 aa7.17□□□□□ -1.26
LRRC28-209ENST00000558861 CCDC158Q5M9N0 1113 aa7.17□□□□□ -1.26
LRRC28-209ENST00000558861 ZBTB41Q5SVQ8 909 aa7.17□□□□□ -1.26
LRRC28-209ENST00000558861 XP32Q5T750 250 aa7.17□□□□□ -1.26
LRRC28-209ENST00000558861 SLFN12LQ6IEE8 588 aa7.17□□□□□ -1.26
LRRC28-209ENST00000558861 APOBEC3HQ6NTF7 200 aaKnown RBP7.17□□□□□ -1.26
LRRC28-209ENST00000558861 CENPQQ7L2Z9 268 aaPredicted RBP7.17□□□□□ -1.26
LRRC28-209ENST00000558861 SKAP1Q86WV1 359 aa7.17□□□□□ -1.26
LRRC28-209ENST00000558861 CXorf67Q86X51 503 aaPredicted RBP7.17□□□□□ -1.26
LRRC28-209ENST00000558861 PHYKPLQ8IUZ5 450 aa7.17□□□□□ -1.26
LRRC28-209ENST00000558861 RAVER1Q8IY67 606 aaKnown RBP7.17□□□□□ -1.26
LRRC28-209ENST00000558861 TGFBRAP1Q8WUH2 860 aa7.17□□□□□ -1.26
LRRC28-209ENST00000558861 KCNN1Q92952 543 aa7.17□□□□□ -1.26
LRRC28-209ENST00000558861 E2F7Q96AV8 911 aa7.17□□□□□ -1.26
LRRC28-209ENST00000558861 NSUN4Q96CB9 384 aaKnown RBP7.17□□□□□ -1.26
LRRC28-209ENST00000558861 C11orf84Q9BUA3 381 aaPredicted RBP7.17□□□□□ -1.26
LRRC28-209ENST00000558861 ECHDC1Q9NTX5 307 aa7.17□□□□□ -1.26
LRRC28-209ENST00000558861 GNL3LQ9NVN8 582 aaKnown RBP7.17□□□□□ -1.26
LRRC28-209ENST00000558861 GALNT8Q9NY28 637 aa7.17□□□□□ -1.26
LRRC28-209ENST00000558861 ARHGAP20Q9P2F6 1191 aa7.17□□□□□ -1.26
LRRC28-209ENST00000558861 CNOT7Q9UIV1 285 aaKnown RBP7.17□□□□□ -1.26
LRRC28-209ENST00000558861 HACL1Q9UJ83 578 aa7.17□□□□□ -1.26
LRRC28-209ENST00000558861 ZFP69BQ9UJL9 534 aa7.17□□□□□ -1.26
LRRC28-209ENST00000558861 PPP2R3BQ9Y5P8 575 aa7.17□□□□□ -1.26
LRRC28-209ENST00000558861 ASTN2O75129 1339 aaPredicted RBP7.17□□□□□ -1.26
LRRC28-209ENST00000558861 TTC41PQ6P2S7 1318 aa7.17□□□□□ -1.26
LRRC28-209ENST00000558861 SCN4AP35499 1836 aa7.17□□□□□ -1.26
LRRC28-209ENST00000558861 RFX7Q2KHR2 1363 aa7.17□□□□□ -1.26
LRRC28-209ENST00000558861 WNT10BO00744 389 aa7.16□□□□□ -1.26
LRRC28-209ENST00000558861 H2AFYO75367 372 aaKnown RBP7.16□□□□□ -1.26
LRRC28-209ENST00000558861 PRPF6O94906 941 aaKnown RBP7.16□□□□□ -1.26
LRRC28-209ENST00000558861 IL18BPO95998 194 aa7.16□□□□□ -1.26
LRRC28-209ENST00000558861 PLA2G1BP04054 148 aaKnown RBP7.16□□□□□ -1.26
LRRC28-209ENST00000558861 CHGBP05060 677 aa7.16□□□□□ -1.26
LRRC28-209ENST00000558861 MYBL2P10244 700 aa7.16□□□□□ -1.26
LRRC28-209ENST00000558861 MX1P20591 662 aa7.16□□□□□ -1.26
LRRC28-209ENST00000558861 EPHX2P34913 555 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms