RNA–Protein interactions for RNA: ENST00000558645.5

CCDC33-204, Transcript of coiled-coil domain containing 33, humanhuman

TSL 3

Gene CCDC33, Length 589 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-204ENST00000558645 ZC3H11AO75152 810 aaKnown RBP eCLIP12.76□□□□□ -0.37
CCDC33-204ENST00000558645 LRRN2O75325 713 aa12.76□□□□□ -0.37
CCDC33-204ENST00000558645 GNA14O95837 355 aa12.76□□□□□ -0.37
CCDC33-204ENST00000558645 ZNF18P17022 549 aa12.76□□□□□ -0.37
CCDC33-204ENST00000558645 KRT31Q15323 416 aa12.76□□□□□ -0.37
CCDC33-204ENST00000558645 ZBTB6Q15916 424 aa12.76□□□□□ -0.37
CCDC33-204ENST00000558645 TDRD10Q5VZ19 366 aaKnown RBP12.76□□□□□ -0.37
CCDC33-204ENST00000558645 WDR49Q8IV35 697 aa12.76□□□□□ -0.37
CCDC33-204ENST00000558645 FAM114A1Q8IWE2 563 aa12.76□□□□□ -0.37
CCDC33-204ENST00000558645 TRIM59Q8IWR1 403 aa12.76□□□□□ -0.37
CCDC33-204ENST00000558645 CD302Q8IX05 232 aa12.76□□□□□ -0.37
CCDC33-204ENST00000558645 LRRC43Q8N309 656 aa12.76□□□□□ -0.37
CCDC33-204ENST00000558645 PHOSPHO2Q8TCD6 241 aa12.76□□□□□ -0.37
CCDC33-204ENST00000558645 TMC2Q8TDI7 906 aa12.76□□□□□ -0.37
CCDC33-204ENST00000558645 FAM193BQ96PV7 902 aaPredicted RBP12.76□□□□□ -0.37
CCDC33-204ENST00000558645 ASB7Q9H672 318 aa12.76□□□□□ -0.37
CCDC33-204ENST00000558645 CWH43Q9H720 699 aa12.76□□□□□ -0.37
CCDC33-204ENST00000558645 METTL14Q9HCE5 456 aaKnown RBP12.76□□□□□ -0.37
CCDC33-204ENST00000558645 DPP3Q9NY33 737 aa12.76□□□□□ -0.37
CCDC33-204ENST00000558645 STXBP5LQ9Y2K9 1186 aa12.76□□□□□ -0.37
CCDC33-204ENST00000558645 C2CD2Q9Y426 696 aa12.76□□□□□ -0.37
CCDC33-204ENST00000558645 NT5C1B-RDH14C9J2C7 533 aa12.75□□□□□ -0.37
CCDC33-204ENST00000558645 CAVIN2O95810 425 aa12.75□□□□□ -0.37
CCDC33-204ENST00000558645 ITGB3P05106 788 aa12.75□□□□□ -0.37
CCDC33-204ENST00000558645 ITGB1P05556 798 aa12.75□□□□□ -0.37
CCDC33-204ENST00000558645 KRT19P08727 400 aa12.75□□□□□ -0.37
CCDC33-204ENST00000558645 TMEM191BP0C7N4 346 aa12.75□□□□□ -0.37
CCDC33-204ENST00000558645 PRKCSHP14314 528 aaPredicted RBP12.75□□□□□ -0.37
CCDC33-204ENST00000558645 CDK11BP21127 795 aaKnown RBP12.75□□□□□ -0.37
CCDC33-204ENST00000558645 CLCNKBP51801 687 aa12.75□□□□□ -0.37
CCDC33-204ENST00000558645 MARSP56192 900 aaKnown RBP12.75□□□□□ -0.37
CCDC33-204ENST00000558645 POU5F1Q01860 360 aaKnown RBP12.75□□□□□ -0.37
CCDC33-204ENST00000558645 DSC1Q08554 894 aa12.75□□□□□ -0.37
CCDC33-204ENST00000558645 KCNH2Q12809 1159 aa12.75□□□□□ -0.37
CCDC33-204ENST00000558645 SURF1Q15526 300 aa12.75□□□□□ -0.37
CCDC33-204ENST00000558645 PTPN21Q16825 1174 aa12.75□□□□□ -0.37
CCDC33-204ENST00000558645 CBWD6Q4V339 395 aa12.75□□□□□ -0.37
CCDC33-204ENST00000558645 CBWD3Q5JTY5 395 aa12.75□□□□□ -0.37
CCDC33-204ENST00000558645 MIIPQ5JXC2 388 aa12.75□□□□□ -0.37
CCDC33-204ENST00000558645 CBWD5Q5RIA9 395 aa12.75□□□□□ -0.37
CCDC33-204ENST00000558645 SPOUT1Q5T280 376 aaKnown RBP12.75□□□□□ -0.37
CCDC33-204ENST00000558645 COLGALT2Q8IYK4 626 aa12.75□□□□□ -0.37
CCDC33-204ENST00000558645 CMTR2Q8IYT2 770 aaKnown RBP12.75□□□□□ -0.37
CCDC33-204ENST00000558645 C1orf127Q8N9H9 656 aa12.75□□□□□ -0.37
CCDC33-204ENST00000558645 HASPINQ8TF76 798 aa12.75□□□□□ -0.37
CCDC33-204ENST00000558645 ANKRD36BP1Q96IX9 119 aa12.75□□□□□ -0.37
CCDC33-204ENST00000558645 RAD9AQ99638 391 aa12.75□□□□□ -0.37
CCDC33-204ENST00000558645 TUBGCP2Q9BSJ2 902 aa12.75□□□□□ -0.37
CCDC33-204ENST00000558645 VPS16Q9H269 839 aa12.75□□□□□ -0.37
CCDC33-204ENST00000558645 RNF216Q9NWF9 866 aaPredicted RBP12.75□□□□□ -0.37
CCDC33-204ENST00000558645 SIX4Q9UIU6 781 aa12.75□□□□□ -0.37
CCDC33-204ENST00000558645 UBQLN1Q9UMX0 589 aaKnown RBP12.75□□□□□ -0.37
CCDC33-204ENST00000558645 INSL6Q9Y581 213 aa12.75□□□□□ -0.37
CCDC33-204ENST00000558645 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.75□□□□□ -0.37
CCDC33-204ENST00000558645 MYO7AQ13402 2215 aa12.74□□□□□ -0.37
CCDC33-204ENST00000558645 PLXNA3P51805 1871 aa12.74□□□□□ -0.37
CCDC33-204ENST00000558645 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.74□□□□□ -0.37
CCDC33-204ENST00000558645 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.74□□□□□ -0.37
CCDC33-204ENST00000558645 GOLGA6L19H0YKK7 550 aa12.74□□□□□ -0.37
CCDC33-204ENST00000558645 PES1O00541 588 aaKnown RBP12.74□□□□□ -0.37
CCDC33-204ENST00000558645 VNN1O95497 513 aa12.74□□□□□ -0.37
CCDC33-204ENST00000558645 TNNC2P02585 160 aa12.74□□□□□ -0.37
CCDC33-204ENST00000558645 C4BPAP04003 597 aaKnown RBP12.74□□□□□ -0.37
CCDC33-204ENST00000558645 CA3P07451 260 aa12.74□□□□□ -0.37
CCDC33-204ENST00000558645 POLR2BP30876 1174 aaKnown RBP12.74□□□□□ -0.37
CCDC33-204ENST00000558645 OR1G1P47890 313 aa12.74□□□□□ -0.37
CCDC33-204ENST00000558645 SLC11A1P49279 550 aa12.74□□□□□ -0.37
CCDC33-204ENST00000558645 COPB1P53618 953 aaKnown RBP12.74□□□□□ -0.37
CCDC33-204ENST00000558645 CLDN10P78369 228 aa12.74□□□□□ -0.37
CCDC33-204ENST00000558645 TUSC3Q13454 348 aa12.74□□□□□ -0.37
CCDC33-204ENST00000558645 BIRC3Q13489 604 aa12.74□□□□□ -0.37
CCDC33-204ENST00000558645 HSP90AA2PQ14568 343 aaPredicted RBP12.74□□□□□ -0.37
CCDC33-204ENST00000558645 MAN2A1Q16706 1144 aa12.74□□□□□ -0.37
CCDC33-204ENST00000558645 APTXQ7Z2E3 356 aaKnown RBP12.74□□□□□ -0.37
CCDC33-204ENST00000558645 TMEM173Q86WV6 379 aaPredicted RBP12.74□□□□□ -0.37
CCDC33-204ENST00000558645 FIBCD1Q8N539 461 aa12.74□□□□□ -0.37
CCDC33-204ENST00000558645 C3orf58Q8NDZ4 430 aa12.74□□□□□ -0.37
CCDC33-204ENST00000558645 BEST2Q8NFU1 509 aa12.74□□□□□ -0.37
CCDC33-204ENST00000558645 CXorf38Q8TB03 319 aa12.74□□□□□ -0.37
CCDC33-204ENST00000558645 CACTINQ8WUQ7 758 aaKnown RBP12.74□□□□□ -0.37
CCDC33-204ENST00000558645 ANP32EQ9BTT0 268 aa12.74□□□□□ -0.37
CCDC33-204ENST00000558645 MRPL9Q9BYD2 267 aaKnown RBP12.74□□□□□ -0.37
CCDC33-204ENST00000558645 PBX4Q9BYU1 374 aa12.74□□□□□ -0.37
CCDC33-204ENST00000558645 NKX2-4Q9H2Z4 354 aa12.74□□□□□ -0.37
CCDC33-204ENST00000558645 KANSL3Q9P2N6 904 aa12.74□□□□□ -0.37
CCDC33-204ENST00000558645 MTUS1Q9ULD2 1270 aa12.74□□□□□ -0.37
CCDC33-204ENST00000558645 PRG3Q9Y2Y8 225 aaPredicted RBP12.74□□□□□ -0.37
CCDC33-204ENST00000558645 DERAQ9Y315 318 aa12.74□□□□□ -0.37
CCDC33-204ENST00000558645 TMEM265A0A087WTH1 108 aa12.73□□□□□ -0.37
CCDC33-204ENST00000558645 LINC01553A4QN01 128 aa12.73□□□□□ -0.37
CCDC33-204ENST00000558645 PODXLO00592 558 aa12.73□□□□□ -0.37
CCDC33-204ENST00000558645 PHACTR2O75167 634 aa12.73□□□□□ -0.37
CCDC33-204ENST00000558645 CST3P01034 146 aaPredicted RBP12.73□□□□□ -0.37
CCDC33-204ENST00000558645 HLA-DRAP01903 254 aa12.73□□□□□ -0.37
CCDC33-204ENST00000558645 LINC00271P0C7V0 271 aa12.73□□□□□ -0.37
CCDC33-204ENST00000558645 EEF1GP26641 437 aaKnown RBP12.73□□□□□ -0.37
CCDC33-204ENST00000558645 FMO5P49326 533 aa12.73□□□□□ -0.37
CCDC33-204ENST00000558645 MXI1P50539 228 aa12.73□□□□□ -0.37
CCDC33-204ENST00000558645 BCAR1P56945 870 aa12.73□□□□□ -0.37
CCDC33-204ENST00000558645 MCCD1P59942 119 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms