RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 OR1G1P47890 313 aa11.2□□□□□ -0.62
TPM1-212ENST00000558347 FAM193AP78312 1265 aa11.2□□□□□ -0.62
TPM1-212ENST00000558347 CBX1P83916 185 aa11.2□□□□□ -0.62
TPM1-212ENST00000558347 GABPB1Q06547 395 aaPredicted RBP11.2□□□□□ -0.62
TPM1-212ENST00000558347 PRPF4BQ13523 1007 aaKnown RBP11.2□□□□□ -0.62
TPM1-212ENST00000558347 NR1I3Q14994 352 aa11.2□□□□□ -0.62
TPM1-212ENST00000558347 PPP2R5AQ15172 486 aa11.2□□□□□ -0.62
TPM1-212ENST00000558347 EEF1DP3Q658K8 133 aa11.2□□□□□ -0.62
TPM1-212ENST00000558347 RINT1Q6NUQ1 792 aa11.2□□□□□ -0.62
TPM1-212ENST00000558347 UNC13DQ70J99 1090 aa11.2□□□□□ -0.62
TPM1-212ENST00000558347 SUSD6Q92537 303 aa11.2□□□□□ -0.62
TPM1-212ENST00000558347 KIFAP3Q92845 792 aa11.2□□□□□ -0.62
TPM1-212ENST00000558347 IFT74Q96LB3 600 aa11.2□□□□□ -0.62
TPM1-212ENST00000558347 BAG1Q99933 345 aaPredicted RBP11.2□□□□□ -0.62
TPM1-212ENST00000558347 CXCL16Q9H2A7 254 aa11.2□□□□□ -0.62
TPM1-212ENST00000558347 C11orf16Q9NQ32 467 aa11.2□□□□□ -0.62
TPM1-212ENST00000558347 FAM53CQ9NYF3 392 aa11.2□□□□□ -0.62
TPM1-212ENST00000558347 KCND2Q9NZV8 630 aa11.2□□□□□ -0.62
TPM1-212ENST00000558347 IRAK3Q9Y616 596 aa11.2□□□□□ -0.62
TPM1-212ENST00000558347 N4BP3O15049 544 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 EFEMP2O95967 443 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 SSBP05455 408 aaKnown RBP eCLIP11.19□□□□□ -0.62
TPM1-212ENST00000558347 H2AFXP16104 143 aaPredicted RBP11.19□□□□□ -0.62
TPM1-212ENST00000558347 NPTX2P47972 431 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 EHHADHQ08426 723 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 MAPK7Q13164 816 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 CDKAL1Q5VV42 579 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 C1orf186Q6ZWK4 172 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 TAS1R1Q7RTX1 841 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 HACE1Q8IYU2 909 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 TC2NQ8N9U0 490 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 CCDC47Q96A33 483 aaKnown RBP11.19□□□□□ -0.62
TPM1-212ENST00000558347 DNAJC19Q96DA6 116 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 C1QTNF1Q9BXJ1 281 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 SNTG2Q9NY99 539 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 CACNG4Q9UBN1 327 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 CDH22Q9UJ99 828 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 PPP2R2CQ9Y2T4 447 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 ITIH6Q6UXX5 1313 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 ZMYM2Q9UBW7 1377 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 FRMD3A2A2Y4 597 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 FAM86C2PA6NEL3 165 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 CCDC169A6NNP5 214 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 AKR1B15C9JRZ8 316 aaPredicted RBP11.19□□□□□ -0.62
TPM1-212ENST00000558347 PTGESO14684 152 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 LILRB3O75022 631 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 SOD2P04179 222 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 SRGAP2BP0DMP2 458 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 EPCAMP16422 314 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 EFNA5P52803 228 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 PEX3P56589 373 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 ASIC1P78348 528 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 RAD51AP2Q09MP3 1159 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 GRIK3Q13003 919 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 GIT2Q14161 759 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 BMS1Q14692 1282 aaKnown RBP11.19□□□□□ -0.62
TPM1-212ENST00000558347 ELF2Q15723 593 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 TMEM132AQ24JP5 1023 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 KMT5BQ4FZB7 885 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 FILIP1LQ4L180 1135 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 ARSHQ5FYA8 562 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 ZNF658Q5TYW1 1059 aaPredicted RBP11.19□□□□□ -0.62
TPM1-212ENST00000558347 TAS1R3Q7RTX0 852 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 GPBP1Q86WP2 473 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 RNF168Q8IYW5 571 aaPredicted RBP11.19□□□□□ -0.62
TPM1-212ENST00000558347 RABGGTAQ92696 567 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 DDX12PQ92771 950 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 CASP10Q92851 521 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 ARID3AQ99856 593 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 RAPGEFL1Q9UHV5 662 aa11.19□□□□□ -0.62
TPM1-212ENST00000558347 SFI1A8K8P3 1242 aa11.18□□□□□ -0.62
TPM1-212ENST00000558347 LOC730098B7Z3J9 87 aa11.18□□□□□ -0.62
TPM1-212ENST00000558347 RECQL4O94761 1208 aa11.18□□□□□ -0.62
TPM1-212ENST00000558347 FECHP22830 423 aa11.18□□□□□ -0.62
TPM1-212ENST00000558347 PBX1P40424 430 aa11.18□□□□□ -0.62
TPM1-212ENST00000558347 SPAG1Q07617 926 aa11.18□□□□□ -0.62
TPM1-212ENST00000558347 PSMD2Q13200 908 aa11.18□□□□□ -0.62
TPM1-212ENST00000558347 TUBB2AQ13885 445 aa11.18□□□□□ -0.62
TPM1-212ENST00000558347 NAA30Q147X3 362 aaPredicted RBP11.18□□□□□ -0.62
TPM1-212ENST00000558347 COBLL1Q53SF7 1204 aa11.18□□□□□ -0.62
TPM1-212ENST00000558347 ATF7IP2Q5U623 682 aa11.18□□□□□ -0.62
TPM1-212ENST00000558347 FBXO38Q6PIJ6 1188 aa11.18□□□□□ -0.62
TPM1-212ENST00000558347 APTXQ7Z2E3 356 aaKnown RBP11.18□□□□□ -0.62
TPM1-212ENST00000558347 CREBRFQ8IUR6 639 aa11.18□□□□□ -0.62
TPM1-212ENST00000558347 KRT222Q8N1A0 295 aa11.18□□□□□ -0.62
TPM1-212ENST00000558347 C12orf76Q8N812 135 aaPredicted RBP11.18□□□□□ -0.62
TPM1-212ENST00000558347 FEZF2Q8TBJ5 459 aa11.18□□□□□ -0.62
TPM1-212ENST00000558347 SLC22A17Q8WUG5 538 aa11.18□□□□□ -0.62
TPM1-212ENST00000558347 DRC1Q96MC2 740 aa11.18□□□□□ -0.62
TPM1-212ENST00000558347 KLHL5Q96PQ7 755 aa11.18□□□□□ -0.62
TPM1-212ENST00000558347 RPS6KC1Q96S38 1066 aa11.18□□□□□ -0.62
TPM1-212ENST00000558347 POP1Q99575 1024 aaKnown RBP11.18□□□□□ -0.62
TPM1-212ENST00000558347 PAAF1Q9BRP4 392 aa11.18□□□□□ -0.62
TPM1-212ENST00000558347 ADPGKQ9BRR6 497 aa11.18□□□□□ -0.62
TPM1-212ENST00000558347 LRFN3Q9BTN0 628 aa11.18□□□□□ -0.62
TPM1-212ENST00000558347 TUBB2BQ9BVA1 445 aa11.18□□□□□ -0.62
TPM1-212ENST00000558347 HERC2P3Q9BVR0 1158 aa11.18□□□□□ -0.62
TPM1-212ENST00000558347 PHF7Q9BWX1 381 aaPredicted RBP11.18□□□□□ -0.62
TPM1-212ENST00000558347 ARGLU1Q9NWB6 273 aaPredicted RBP11.18□□□□□ -0.62
TPM1-212ENST00000558347 ARHGAP28Q9P2N2 729 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms