RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 ANKS3Q6ZW76 656 aa13□□□□□ -0.33
HERC1-202ENST00000558324 GRASPQ7Z6J2 395 aaPredicted RBP13□□□□□ -0.33
HERC1-202ENST00000558324 SFR1Q86XK3 245 aa13□□□□□ -0.33
HERC1-202ENST00000558324 ST13P5Q8NFI4 369 aaPredicted RBP13□□□□□ -0.33
HERC1-202ENST00000558324 RSAD2Q8WXG1 361 aa13□□□□□ -0.33
HERC1-202ENST00000558324 FOXD4L4Q8WXT5 416 aaPredicted RBP13□□□□□ -0.33
HERC1-202ENST00000558324 FAM212AQ96EL1 285 aa13□□□□□ -0.33
HERC1-202ENST00000558324 KIF12Q96FN5 646 aa13□□□□□ -0.33
HERC1-202ENST00000558324 MYADMQ96S97 322 aa13□□□□□ -0.33
HERC1-202ENST00000558324 MSTO1Q9BUK6 570 aa13□□□□□ -0.33
HERC1-202ENST00000558324 KCNK12Q9HB15 430 aa13□□□□□ -0.33
HERC1-202ENST00000558324 VWA8A3KMH1 1905 aa13□□□□□ -0.33
HERC1-202ENST00000558324 TISP43B9A030 160 aa12.99□□□□□ -0.33
HERC1-202ENST00000558324 C1RP00736 705 aa12.99□□□□□ -0.33
HERC1-202ENST00000558324 RPL9P32969 192 aaKnown RBP12.99□□□□□ -0.33
HERC1-202ENST00000558324 GUCY2FP51841 1108 aa12.99□□□□□ -0.33
HERC1-202ENST00000558324 STK38Q15208 465 aa12.99□□□□□ -0.33
HERC1-202ENST00000558324 AXDND1Q5T1B0 1012 aaPredicted RBP12.99□□□□□ -0.33
HERC1-202ENST00000558324 SLC39A4Q6P5W5 647 aa12.99□□□□□ -0.33
HERC1-202ENST00000558324 RHOBTB2Q9BYZ6 727 aa12.99□□□□□ -0.33
HERC1-202ENST00000558324 PANK2Q9BZ23 570 aa12.99□□□□□ -0.33
HERC1-202ENST00000558324 STK17AQ9UEE5 414 aa12.99□□□□□ -0.33
HERC1-202ENST00000558324 BACE2Q9Y5Z0 518 aa12.99□□□□□ -0.33
HERC1-202ENST00000558324 TTC26A0AVF1 554 aa12.98□□□□□ -0.33
HERC1-202ENST00000558324 MYMKA6NI61 221 aa12.98□□□□□ -0.33
HERC1-202ENST00000558324 LACTBL1A8MY62 500 aa12.98□□□□□ -0.33
HERC1-202ENST00000558324 ANKRD63C9JTQ0 380 aa12.98□□□□□ -0.33
HERC1-202ENST00000558324 TULP1O00294 542 aaPredicted RBP12.98□□□□□ -0.33
HERC1-202ENST00000558324 OGTO15294 1046 aa12.98□□□□□ -0.33
HERC1-202ENST00000558324 NARSO43776 548 aaKnown RBP12.98□□□□□ -0.33
HERC1-202ENST00000558324 FAM189A1O60320 539 aa12.98□□□□□ -0.33
HERC1-202ENST00000558324 PIGRP01833 764 aa12.98□□□□□ -0.33
HERC1-202ENST00000558324 HSP90AA1P07900 732 aaKnown RBP12.98□□□□□ -0.33
HERC1-202ENST00000558324 HNRNPA1P09651 372 aaKnown RBP eCLIP12.98□□□□□ -0.33
HERC1-202ENST00000558324 FSHRP23945 695 aa12.98□□□□□ -0.33
HERC1-202ENST00000558324 STAT6P42226 847 aa12.98□□□□□ -0.33
HERC1-202ENST00000558324 ROR1Q01973 937 aa12.98□□□□□ -0.33
HERC1-202ENST00000558324 TDGQ13569 410 aa12.98□□□□□ -0.33
HERC1-202ENST00000558324 ENOX2Q16206 610 aaKnown RBP12.98□□□□□ -0.33
HERC1-202ENST00000558324 FOXD4L6Q3SYB3 417 aaPredicted RBP12.98□□□□□ -0.33
HERC1-202ENST00000558324 FOXD4L3Q6VB84 417 aaPredicted RBP12.98□□□□□ -0.33
HERC1-202ENST00000558324 MAP4K3Q8IVH8 894 aa12.98□□□□□ -0.33
HERC1-202ENST00000558324 HSCBQ8IWL3 235 aa12.98□□□□□ -0.33
HERC1-202ENST00000558324 PDILTQ8N807 584 aa12.98□□□□□ -0.33
HERC1-202ENST00000558324 PRSS33Q8NF86 280 aa12.98□□□□□ -0.33
HERC1-202ENST00000558324 DDX12PQ92771 950 aa12.98□□□□□ -0.33
HERC1-202ENST00000558324 FIZ1Q96SL8 496 aa12.98□□□□□ -0.33
HERC1-202ENST00000558324 IKZF4Q9H2S9 585 aa12.98□□□□□ -0.33
HERC1-202ENST00000558324 MFSD1Q9H3U5 465 aa12.98□□□□□ -0.33
HERC1-202ENST00000558324 ZSCAN16Q9H4T2 348 aaPredicted RBP12.98□□□□□ -0.33
HERC1-202ENST00000558324 RPF1Q9H9Y2 349 aaKnown RBP12.98□□□□□ -0.33
HERC1-202ENST00000558324 PLEKHA5Q9HAU0 1116 aa12.98□□□□□ -0.33
HERC1-202ENST00000558324 HCFC1R1Q9NWW0 138 aa12.98□□□□□ -0.33
HERC1-202ENST00000558324 TBC1D7Q9P0N9 293 aa12.98□□□□□ -0.33
HERC1-202ENST00000558324 TRIP11Q15643 1979 aa12.98□□□□□ -0.33
HERC1-202ENST00000558324 A0A087X0B3 334 aa12.97□□□□□ -0.33
HERC1-202ENST00000558324 A0A0B4J269 797 aa12.97□□□□□ -0.33
HERC1-202ENST00000558324 WDR27A2RRH5 827 aa12.97□□□□□ -0.33
HERC1-202ENST00000558324 PRRG1O14668 218 aa12.97□□□□□ -0.33
HERC1-202ENST00000558324 SYN3O14994 580 aa12.97□□□□□ -0.33
HERC1-202ENST00000558324 XYLBO75191 536 aa12.97□□□□□ -0.33
HERC1-202ENST00000558324 PAPLNO95428 1278 aa12.97□□□□□ -0.33
HERC1-202ENST00000558324 IDEP14735 1019 aa12.97□□□□□ -0.33
HERC1-202ENST00000558324 SCP2P22307 547 aa12.97□□□□□ -0.33
HERC1-202ENST00000558324 AVPR2P30518 371 aa12.97□□□□□ -0.33
HERC1-202ENST00000558324 ACOT2P49753 483 aa12.97□□□□□ -0.33
HERC1-202ENST00000558324 GTF2BQ00403 316 aa12.97□□□□□ -0.33
HERC1-202ENST00000558324 SLC39A14Q15043 492 aa12.97□□□□□ -0.33
HERC1-202ENST00000558324 KYAT1Q16773 422 aa12.97□□□□□ -0.33
HERC1-202ENST00000558324 CTXN3Q4LDR2 81 aa12.97□□□□□ -0.33
HERC1-202ENST00000558324 ADALQ6DHV7 355 aa12.97□□□□□ -0.33
HERC1-202ENST00000558324 CCDC73Q6ZRK6 1079 aa12.97□□□□□ -0.33
HERC1-202ENST00000558324 SV2BQ7L1I2 683 aa12.97□□□□□ -0.33
HERC1-202ENST00000558324 KCNN1Q92952 543 aa12.97□□□□□ -0.33
HERC1-202ENST00000558324 SUSD3Q96L08 255 aa12.97□□□□□ -0.33
HERC1-202ENST00000558324 MRPL44Q9H9J2 332 aaKnown RBP12.97□□□□□ -0.33
HERC1-202ENST00000558324 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.97□□□□□ -0.33
HERC1-202ENST00000558324 IGSF9Q9P2J2 1179 aa12.97□□□□□ -0.33
HERC1-202ENST00000558324 TFIP11Q9UBB9 837 aaKnown RBP12.97□□□□□ -0.33
HERC1-202ENST00000558324 EPS15L1Q9UBC2 864 aa12.97□□□□□ -0.33
HERC1-202ENST00000558324 FBXL5Q9UKA1 691 aa12.97□□□□□ -0.33
HERC1-202ENST00000558324 FBXL21Q9UKT6 434 aa12.97□□□□□ -0.33
HERC1-202ENST00000558324 UBQLN1Q9UMX0 589 aaKnown RBP12.97□□□□□ -0.33
HERC1-202ENST00000558324 DUSP12Q9UNI6 340 aa12.97□□□□□ -0.33
HERC1-202ENST00000558324 TIMM13Q9Y5L4 95 aaPredicted RBP12.97□□□□□ -0.33
HERC1-202ENST00000558324 TRIOO75962 3097 aa12.97□□□□□ -0.33
HERC1-202ENST00000558324 CITO14578 2027 aa12.96□□□□□ -0.33
HERC1-202ENST00000558324 KMT2EQ8IZD2 1858 aa12.96□□□□□ -0.33
HERC1-202ENST00000558324 H7C4K7 107 aa12.96□□□□□ -0.33
HERC1-202ENST00000558324 CFHP08603 1231 aa12.96□□□□□ -0.33
HERC1-202ENST00000558324 NFICP08651 508 aa12.96□□□□□ -0.33
HERC1-202ENST00000558324 LAMP2P13473 410 aa12.96□□□□□ -0.33
HERC1-202ENST00000558324 HOXA9P31269 272 aa12.96□□□□□ -0.33
HERC1-202ENST00000558324 ELF1P32519 619 aa12.96□□□□□ -0.33
HERC1-202ENST00000558324 NASPP49321 788 aaPredicted RBP12.96□□□□□ -0.33
HERC1-202ENST00000558324 NHLH1Q02575 133 aa12.96□□□□□ -0.33
HERC1-202ENST00000558324 JADE1Q6IE81 842 aa12.96□□□□□ -0.33
HERC1-202ENST00000558324 SLC8B1Q6J4K2 584 aa12.96□□□□□ -0.33
HERC1-202ENST00000558324 ZNF280DQ6N043 979 aa12.96□□□□□ -0.33
HERC1-202ENST00000558324 SPRYD3Q8NCJ5 442 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms