RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 MAN1C1Q9NR34 630 aa4.44□□□□□ -1.7
SPG11-206ENST00000558093 AASDHPPTQ9NRN7 309 aa4.44□□□□□ -1.7
SPG11-206ENST00000558093 KLHL11Q9NVR0 708 aa4.44□□□□□ -1.7
SPG11-206ENST00000558093 ANKFY1Q9P2R3 1169 aa4.44□□□□□ -1.7
SPG11-206ENST00000558093 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.44□□□□□ -1.7
SPG11-206ENST00000558093 MTO1Q9Y2Z2 717 aaKnown RBP4.44□□□□□ -1.7
SPG11-206ENST00000558093 IPPQ9Y573 584 aa4.44□□□□□ -1.7
SPG11-206ENST00000558093 CFAP20Q9Y6A4 193 aaKnown RBP4.44□□□□□ -1.7
SPG11-206ENST00000558093 GRM6O15303 877 aa4.43□□□□□ -1.7
SPG11-206ENST00000558093 CDKL5O76039 1030 aa4.43□□□□□ -1.7
SPG11-206ENST00000558093 GPANK1O95872 356 aa4.43□□□□□ -1.7
SPG11-206ENST00000558093 FGFR4P22455 802 aa4.43□□□□□ -1.7
SPG11-206ENST00000558093 GCSHP23434 173 aa4.43□□□□□ -1.7
SPG11-206ENST00000558093 ZFP36P26651 326 aaKnown RBP4.43□□□□□ -1.7
SPG11-206ENST00000558093 NEK2P51955 445 aa4.43□□□□□ -1.7
SPG11-206ENST00000558093 HSD11B2P80365 405 aa4.43□□□□□ -1.7
SPG11-206ENST00000558093 ATP8B2P98198 1209 aa4.43□□□□□ -1.7
SPG11-206ENST00000558093 RESTQ13127 1097 aa4.43□□□□□ -1.7
SPG11-206ENST00000558093 DACT2Q5SW24 774 aa4.43□□□□□ -1.7
SPG11-206ENST00000558093 ARMC6Q6NXE6 501 aa4.43□□□□□ -1.7
SPG11-206ENST00000558093 RHOUQ7L0Q8 258 aa4.43□□□□□ -1.7
SPG11-206ENST00000558093 RPUSD2Q8IZ73 545 aaKnown RBP4.43□□□□□ -1.7
SPG11-206ENST00000558093 LCORLQ8N3X6 602 aa4.43□□□□□ -1.7
SPG11-206ENST00000558093 IFI44Q8TCB0 444 aa4.43□□□□□ -1.7
SPG11-206ENST00000558093 CHFRQ96EP1 664 aa4.43□□□□□ -1.7
SPG11-206ENST00000558093 GSTO2Q9H4Y5 243 aa4.43□□□□□ -1.7
SPG11-206ENST00000558093 TESQ9UGI8 421 aaKnown RBP4.43□□□□□ -1.7
SPG11-206ENST00000558093 SERPINB13Q9UIV8 391 aa4.43□□□□□ -1.7
SPG11-206ENST00000558093 AATKQ6ZMQ8 1374 aa4.42□□□□□ -1.7
SPG11-206ENST00000558093 A0A087X1B8 175 aa4.42□□□□□ -1.7
SPG11-206ENST00000558093 TMEM200CA6NKL6 621 aa4.42□□□□□ -1.7
SPG11-206ENST00000558093 B3GALT2O43825 422 aa4.42□□□□□ -1.7
SPG11-206ENST00000558093 CFIP05156 583 aa4.42□□□□□ -1.7
SPG11-206ENST00000558093 CKBP12277 381 aa4.42□□□□□ -1.7
SPG11-206ENST00000558093 EDNRBP24530 442 aa4.42□□□□□ -1.7
SPG11-206ENST00000558093 BMPR1AP36894 532 aa4.42□□□□□ -1.7
SPG11-206ENST00000558093 USP14P54578 494 aa4.42□□□□□ -1.7
SPG11-206ENST00000558093 OCA2Q04671 838 aa4.42□□□□□ -1.7
SPG11-206ENST00000558093 DPTQ07507 201 aa4.42□□□□□ -1.7
SPG11-206ENST00000558093 PABPC1LQ4VXU2 614 aaKnown RBP4.42□□□□□ -1.7
SPG11-206ENST00000558093 TMEM240Q5SV17 173 aa4.42□□□□□ -1.7
SPG11-206ENST00000558093 METRNLQ641Q3 311 aa4.42□□□□□ -1.7
SPG11-206ENST00000558093 LAIR1Q6GTX8 287 aa4.42□□□□□ -1.7
SPG11-206ENST00000558093 TTC7BQ86TV6 843 aa4.42□□□□□ -1.7
SPG11-206ENST00000558093 LDLRAD3Q86YD5 345 aa4.42□□□□□ -1.7
SPG11-206ENST00000558093 CMTR2Q8IYT2 770 aaKnown RBP4.42□□□□□ -1.7
SPG11-206ENST00000558093 AOPEPQ8N6M6 819 aa4.42□□□□□ -1.7
SPG11-206ENST00000558093 DCBLD1Q8N8Z6 715 aa4.42□□□□□ -1.7
SPG11-206ENST00000558093 SUPT20HQ8NEM7 779 aa4.42□□□□□ -1.7
SPG11-206ENST00000558093 ALOXE3Q9BYJ1 711 aa4.42□□□□□ -1.7
SPG11-206ENST00000558093 WDR11Q9BZH6 1224 aa4.42□□□□□ -1.7
SPG11-206ENST00000558093 SERHL2Q9H4I8 314 aa4.42□□□□□ -1.7
SPG11-206ENST00000558093 TYW1Q9NV66 732 aaKnown RBP4.42□□□□□ -1.7
SPG11-206ENST00000558093 USP25Q9UHP3 1055 aa4.42□□□□□ -1.7
SPG11-206ENST00000558093 HS3ST4Q9Y661 456 aa4.42□□□□□ -1.7
SPG11-206ENST00000558093 ZRANB2O95218 330 aaKnown RBP eCLIP4.41□□□□□ -1.7
SPG11-206ENST00000558093 FOSP01100 380 aaPredicted RBP4.41□□□□□ -1.7
SPG11-206ENST00000558093 ITGAMP11215 1152 aa4.41□□□□□ -1.7
SPG11-206ENST00000558093 SMARCA1P28370 1054 aa4.41□□□□□ -1.7
SPG11-206ENST00000558093 AVPR1BP47901 424 aa4.41□□□□□ -1.7
SPG11-206ENST00000558093 ZNF280AP59817 542 aaPredicted RBP4.41□□□□□ -1.7
SPG11-206ENST00000558093 TLE1Q04724 770 aa4.41□□□□□ -1.7
SPG11-206ENST00000558093 TP53BP2Q13625 1128 aa4.41□□□□□ -1.7
SPG11-206ENST00000558093 CCDC157Q569K6 752 aa4.41□□□□□ -1.7
SPG11-206ENST00000558093 VRK3Q8IV63 474 aa4.41□□□□□ -1.7
SPG11-206ENST00000558093 ARHGEF19Q8IW93 802 aa4.41□□□□□ -1.7
SPG11-206ENST00000558093 ULK2Q8IYT8 1036 aa4.41□□□□□ -1.7
SPG11-206ENST00000558093 NUP133Q8WUM0 1156 aa4.41□□□□□ -1.7
SPG11-206ENST00000558093 CAVIN3Q969G5 261 aa4.41□□□□□ -1.7
SPG11-206ENST00000558093 HSPBAP1Q96EW2 488 aa4.41□□□□□ -1.7
SPG11-206ENST00000558093 MARS2Q96GW9 593 aaKnown RBP4.41□□□□□ -1.7
SPG11-206ENST00000558093 MRGPRX4Q96LA9 322 aa4.41□□□□□ -1.7
SPG11-206ENST00000558093 PNKPQ96T60 521 aa4.41□□□□□ -1.7
SPG11-206ENST00000558093 VRK1Q99986 396 aaPredicted RBP4.41□□□□□ -1.7
SPG11-206ENST00000558093 DDX56Q9NY93 547 aaKnown RBP4.41□□□□□ -1.7
SPG11-206ENST00000558093 FAM30AQ9NZY2 134 aa4.41□□□□□ -1.7
SPG11-206ENST00000558093 CALCOCO1Q9P1Z2 691 aa4.41□□□□□ -1.7
SPG11-206ENST00000558093 IP6K2Q9UHH9 426 aa4.41□□□□□ -1.7
SPG11-206ENST00000558093 CDYLQ9Y232 598 aa4.41□□□□□ -1.7
SPG11-206ENST00000558093 SHROOM4Q9ULL8 1493 aa4.41□□□□□ -1.7
SPG11-206ENST00000558093 MARCH11A6NNE9 402 aa4.4□□□□□ -1.71
SPG11-206ENST00000558093 ALDH1L1O75891 902 aa4.4□□□□□ -1.71
SPG11-206ENST00000558093 AGFG2O95081 481 aa4.4□□□□□ -1.71
SPG11-206ENST00000558093 PRSS23O95084 383 aa4.4□□□□□ -1.71
SPG11-206ENST00000558093 SPDEFO95238 335 aa4.4□□□□□ -1.71
SPG11-206ENST00000558093 ELANEP08246 267 aa4.4□□□□□ -1.71
SPG11-206ENST00000558093 GNAI3P08754 354 aa4.4□□□□□ -1.71
SPG11-206ENST00000558093 VCAM1P19320 739 aa4.4□□□□□ -1.71
SPG11-206ENST00000558093 GNAI1P63096 354 aa4.4□□□□□ -1.71
SPG11-206ENST00000558093 NOMO3P69849 1222 aa4.4□□□□□ -1.71
SPG11-206ENST00000558093 CXADRP78310 365 aa4.4□□□□□ -1.71
SPG11-206ENST00000558093 KHDC1Q4VXA5 237 aaKnown RBP4.4□□□□□ -1.71
SPG11-206ENST00000558093 NOMO2Q5JPE7 1267 aa4.4□□□□□ -1.71
SPG11-206ENST00000558093 UTP14CQ5TAP6 766 aaKnown RBP4.4□□□□□ -1.71
SPG11-206ENST00000558093 THEMIS2Q5TEJ8 643 aa4.4□□□□□ -1.71
SPG11-206ENST00000558093 HECTD2Q5U5R9 776 aa4.4□□□□□ -1.71
SPG11-206ENST00000558093 SLC4A10Q6U841 1118 aa4.4□□□□□ -1.71
SPG11-206ENST00000558093 TMEM132CQ8N3T6 1108 aa4.4□□□□□ -1.71
SPG11-206ENST00000558093 CPA6Q8N4T0 437 aa4.4□□□□□ -1.71
SPG11-206ENST00000558093 NSUN6Q8TEA1 469 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms