RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 ZNF521Q96K83 1311 aa8.81□□□□□ -1
CHD8-213ENST00000557364 TARSL2A2RTX5 802 aaKnown RBP8.81□□□□□ -1
CHD8-213ENST00000557364 F9P00740 461 aa8.81□□□□□ -1
CHD8-213ENST00000557364 NCF2P19878 526 aaPredicted RBP8.81□□□□□ -1
CHD8-213ENST00000557364 AKT1P31749 480 aa8.81□□□□□ -1
CHD8-213ENST00000557364 RASSF3Q86WH2 238 aa8.81□□□□□ -1
CHD8-213ENST00000557364 ZDHHC15Q96MV8 337 aa8.81□□□□□ -1
CHD8-213ENST00000557364 EHD4Q9H223 541 aa8.81□□□□□ -1
CHD8-213ENST00000557364 SLC25A13Q9UJS0 675 aa8.81□□□□□ -1
CHD8-213ENST00000557364 SPECC1L-ADORA2AF8WAN1 911 aa8.81□□□□□ -1
CHD8-213ENST00000557364 HGSO14964 777 aaPredicted RBP8.81□□□□□ -1
CHD8-213ENST00000557364 CSF1RP07333 972 aa8.81□□□□□ -1
CHD8-213ENST00000557364 ACTR2P61160 394 aa8.81□□□□□ -1
CHD8-213ENST00000557364 TMPRSS15P98073 1019 aa8.81□□□□□ -1
CHD8-213ENST00000557364 FBXO33Q7Z6M2 555 aa8.81□□□□□ -1
CHD8-213ENST00000557364 GPIHBP1Q8IV16 184 aa8.81□□□□□ -1
CHD8-213ENST00000557364 BCAS4Q8TDM0 211 aa8.81□□□□□ -1
CHD8-213ENST00000557364 RAPGEF5Q92565 580 aa8.81□□□□□ -1
CHD8-213ENST00000557364 SENP7Q9BQF6 1050 aa8.81□□□□□ -1
CHD8-213ENST00000557364 TMEM60Q9H2L4 133 aa8.81□□□□□ -1
CHD8-213ENST00000557364 SFI1A8K8P3 1242 aa8.8□□□□□ -1
CHD8-213ENST00000557364 NDUFS3O75489 264 aa8.8□□□□□ -1
CHD8-213ENST00000557364 OAZ1P54368 228 aa8.8□□□□□ -1
CHD8-213ENST00000557364 BACE1P56817 501 aa8.8□□□□□ -1
CHD8-213ENST00000557364 KRT80Q6KB66 452 aa8.8□□□□□ -1
CHD8-213ENST00000557364 SEPT5Q99719 369 aaPredicted RBP8.8□□□□□ -1
CHD8-213ENST00000557364 ABCF3Q9NUQ8 709 aa8.8□□□□□ -1
CHD8-213ENST00000557364 KIF1AQ12756 1690 aa8.8□□□□□ -1
CHD8-213ENST00000557364 ZNF500O60304 480 aaPredicted RBP8.8□□□□□ -1
CHD8-213ENST00000557364 EPHB3P54753 998 aa8.8□□□□□ -1
CHD8-213ENST00000557364 PRKCEQ02156 737 aa8.8□□□□□ -1
CHD8-213ENST00000557364 NKX1-1Q15270 411 aaPredicted RBP8.8□□□□□ -1
CHD8-213ENST00000557364 EFCAB12Q6NXP0 572 aa8.8□□□□□ -1
CHD8-213ENST00000557364 USP50Q70EL3 339 aaPredicted RBP8.8□□□□□ -1
CHD8-213ENST00000557364 TRIM59Q8IWR1 403 aa8.8□□□□□ -1
CHD8-213ENST00000557364 ESRRAP11474 423 aaPredicted RBP8.8□□□□□ -1
CHD8-213ENST00000557364 ADCY1Q08828 1119 aa8.8□□□□□ -1
CHD8-213ENST00000557364 SARM1Q6SZW1 724 aa8.8□□□□□ -1
CHD8-213ENST00000557364 HERC6Q8IVU3 1022 aa8.8□□□□□ -1
CHD8-213ENST00000557364 TNIP2Q8NFZ5 429 aa8.8□□□□□ -1
CHD8-213ENST00000557364 DPF3Q92784 378 aa8.8□□□□□ -1
CHD8-213ENST00000557364 ARL8AQ96BM9 186 aa8.8□□□□□ -1
CHD8-213ENST00000557364 TADA1Q96BN2 335 aa8.8□□□□□ -1
CHD8-213ENST00000557364 HSPBP1Q9NZL4 362 aa8.8□□□□□ -1
CHD8-213ENST00000557364 SYNPO2Q9UMS6 1093 aa8.8□□□□□ -1
CHD8-213ENST00000557364 PKP3Q9Y446 797 aa8.8□□□□□ -1
CHD8-213ENST00000557364 NPM3O75607 178 aaKnown RBP8.8□□□□□ -1
CHD8-213ENST00000557364 MOCS2O96007 188 aaPredicted RBP8.8□□□□□ -1
CHD8-213ENST00000557364 SERPINB9P50453 376 aa8.8□□□□□ -1
CHD8-213ENST00000557364 SKP1P63208 163 aa8.8□□□□□ -1
CHD8-213ENST00000557364 PTK6Q13882 451 aa8.8□□□□□ -1
CHD8-213ENST00000557364 SRBD1Q8N5C6 995 aaKnown RBP8.8□□□□□ -1
CHD8-213ENST00000557364 SLC44A5Q8NCS7 719 aa8.8□□□□□ -1
CHD8-213ENST00000557364 VPS37AQ8NEZ2 397 aa8.8□□□□□ -1
CHD8-213ENST00000557364 ACTR5Q9H9F9 607 aaPredicted RBP8.8□□□□□ -1
CHD8-213ENST00000557364 STARD7Q9NQZ5 370 aa8.8□□□□□ -1
CHD8-213ENST00000557364 AKAP7Q9P0M2 348 aaPredicted RBP8.8□□□□□ -1
CHD8-213ENST00000557364 E2F6O75461 281 aa8.8□□□□□ -1
CHD8-213ENST00000557364 SLC20A1Q8WUM9 679 aa8.8□□□□□ -1
CHD8-213ENST00000557364 TMEM8AQ9HCN3 771 aa8.8□□□□□ -1
CHD8-213ENST00000557364 SNX9Q9Y5X1 595 aa8.8□□□□□ -1
CHD8-213ENST00000557364 ERCC6L2Q5T890 1561 aa8.8□□□□□ -1
CHD8-213ENST00000557364 E9PMD0 336 aa8.8□□□□□ -1
CHD8-213ENST00000557364 FBXO21O94952 628 aa8.8□□□□□ -1
CHD8-213ENST00000557364 SERPINB4P48594 390 aa8.8□□□□□ -1
CHD8-213ENST00000557364 FKBP1AP62942 108 aaKnown RBP8.8□□□□□ -1
CHD8-213ENST00000557364 KRT72Q14CN4 511 aa8.8□□□□□ -1
CHD8-213ENST00000557364 HIST2H2ACQ16777 129 aaPredicted RBP8.8□□□□□ -1
CHD8-213ENST00000557364 MGAT5BQ3V5L5 792 aa8.8□□□□□ -1
CHD8-213ENST00000557364 HIST2H2AA3Q6FI13 130 aa8.8□□□□□ -1
CHD8-213ENST00000557364 LINC00116Q8NCU8 138 aa8.8□□□□□ -1
CHD8-213ENST00000557364 C7orf25Q9BPX7 421 aa8.8□□□□□ -1
CHD8-213ENST00000557364 ZFATQ9P243 1243 aa8.8□□□□□ -1
CHD8-213ENST00000557364 IQGAP1P46940 1657 aa8.8□□□□□ -1
CHD8-213ENST00000557364 XYLBO75191 536 aa8.8□□□□□ -1
CHD8-213ENST00000557364 LCP1P13796 627 aa8.8□□□□□ -1
CHD8-213ENST00000557364 GTF2H1P32780 548 aa8.8□□□□□ -1
CHD8-213ENST00000557364 EFTUD2Q15029 972 aaKnown RBP eCLIP8.8□□□□□ -13e-6■■■■■ 32.1
CHD8-213ENST00000557364 EZH2Q15910 746 aaKnown RBP8.8□□□□□ -1
CHD8-213ENST00000557364 TAF2Q6P1X5 1199 aa8.8□□□□□ -1
CHD8-213ENST00000557364 MYCBPQ99417 103 aaPredicted RBP8.8□□□□□ -1
CHD8-213ENST00000557364 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.8□□□□□ -15e-7■■■□□ 15.8
CHD8-213ENST00000557364 C1QTNF7Q9BXJ2 289 aa8.8□□□□□ -1
CHD8-213ENST00000557364 SARS2Q9NP81 518 aaKnown RBP8.8□□□□□ -1
CHD8-213ENST00000557364 GTSE1Q9NYZ3 720 aa8.8□□□□□ -1
CHD8-213ENST00000557364 KIF17Q9P2E2 1029 aa8.8□□□□□ -1
CHD8-213ENST00000557364 MROH7Q68CQ1 1323 aa8.79□□□□□ -1
CHD8-213ENST00000557364 UBA6A0AVT1 1052 aaPredicted RBP8.79□□□□□ -1
CHD8-213ENST00000557364 AMHP03971 560 aa8.79□□□□□ -1
CHD8-213ENST00000557364 CDH18Q13634 790 aa8.79□□□□□ -1
CHD8-213ENST00000557364 PCBP1Q15365 356 aaKnown RBP eCLIP8.79□□□□□ -16e-7■■□□□ 12.7
CHD8-213ENST00000557364 CCDC144BQ3MJ40 725 aa8.79□□□□□ -1
CHD8-213ENST00000557364 DCAF6Q58WW2 860 aa8.79□□□□□ -1
CHD8-213ENST00000557364 FKBP1CQ5VVH2 108 aa8.79□□□□□ -1
CHD8-213ENST00000557364 TSEN34Q9BSV6 310 aaKnown RBP8.79□□□□□ -1
CHD8-213ENST00000557364 FTCDO95954 541 aa8.79□□□□□ -1
CHD8-213ENST00000557364 CDH2P19022 906 aaPredicted RBP8.79□□□□□ -1
CHD8-213ENST00000557364 GNL1P36915 607 aaPredicted RBP8.79□□□□□ -1
CHD8-213ENST00000557364 LHX1P48742 406 aa8.79□□□□□ -1
CHD8-213ENST00000557364 TGM3Q08188 693 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms