RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 HTR4Q13639 388 aa15.48■□□□□ 0.07
SNX6-210ENST00000557341 UVSSAQ2YD98 709 aa15.48■□□□□ 0.07
SNX6-210ENST00000557341 VARS2Q5ST30 1063 aaKnown RBP15.48■□□□□ 0.07
SNX6-210ENST00000557341 RSPO2Q6UXX9 243 aaPredicted RBP15.48■□□□□ 0.07
SNX6-210ENST00000557341 RTL10Q7L3V2 364 aa15.48■□□□□ 0.07
SNX6-210ENST00000557341 GPBP1Q86WP2 473 aa15.48■□□□□ 0.07
SNX6-210ENST00000557341 SLC44A3Q8N4M1 653 aa15.48■□□□□ 0.07
SNX6-210ENST00000557341 RASSF8Q8NHQ8 419 aa15.48■□□□□ 0.07
SNX6-210ENST00000557341 ATOH1Q92858 354 aaPredicted RBP15.48■□□□□ 0.07
SNX6-210ENST00000557341 REEP2Q9BRK0 252 aa15.48■□□□□ 0.07
SNX6-210ENST00000557341 WNT16Q9UBV4 365 aa15.48■□□□□ 0.07
SNX6-210ENST00000557341 CFAP54Q96N23 3096 aa15.47■□□□□ 0.07
SNX6-210ENST00000557341 NPHP3-ACAD11A0A0J9YXS1 232 aa15.47■□□□□ 0.07
SNX6-210ENST00000557341 VPS37CA5D8V6 355 aaPredicted RBP15.47■□□□□ 0.07
SNX6-210ENST00000557341 ANHXE9PGG2 379 aa15.47■□□□□ 0.07
SNX6-210ENST00000557341 SYN3O14994 580 aa15.47■□□□□ 0.07
SNX6-210ENST00000557341 CXCL8P10145 99 aa15.47■□□□□ 0.07
SNX6-210ENST00000557341 SCP2P22307 547 aa15.47■□□□□ 0.07
SNX6-210ENST00000557341 RFX1P22670 979 aa15.47■□□□□ 0.07
SNX6-210ENST00000557341 LONP1P36776 959 aaKnown RBP15.47■□□□□ 0.07
SNX6-210ENST00000557341 NTHL1P78549 312 aa15.47■□□□□ 0.07
SNX6-210ENST00000557341 ROR1Q01973 937 aa15.47■□□□□ 0.07
SNX6-210ENST00000557341 SEZ6Q53EL9 994 aa15.47■□□□□ 0.07
SNX6-210ENST00000557341 ARSHQ5FYA8 562 aa15.47■□□□□ 0.07
SNX6-210ENST00000557341 SLC8B1Q6J4K2 584 aa15.47■□□□□ 0.07
SNX6-210ENST00000557341 HAUS6Q7Z4H7 955 aa15.47■□□□□ 0.07
SNX6-210ENST00000557341 NUP210Q8TEM1 1887 aaPredicted RBP15.47■□□□□ 0.07
SNX6-210ENST00000557341 KCNN1Q92952 543 aa15.47■□□□□ 0.07
SNX6-210ENST00000557341 C18orf25Q96B23 403 aaPredicted RBP15.47■□□□□ 0.07
SNX6-210ENST00000557341 CDH7Q9ULB5 785 aa15.47■□□□□ 0.07
SNX6-210ENST00000557341 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.47■□□□□ 0.07
SNX6-210ENST00000557341 NUMBLQ9Y6R0 609 aa15.47■□□□□ 0.07
SNX6-210ENST00000557341 TICRRQ7Z2Z1 1910 aa15.47■□□□□ 0.07
SNX6-210ENST00000557341 SCN1AP35498 2009 aa15.46■□□□□ 0.07
SNX6-210ENST00000557341 K7ENM7 598 aa15.46■□□□□ 0.07
SNX6-210ENST00000557341 HNRNPDLO14979 420 aaKnown RBP15.46■□□□□ 0.07
SNX6-210ENST00000557341 MEFVO15553 781 aaPredicted RBP15.46■□□□□ 0.07
SNX6-210ENST00000557341 FAM13AO94988 1023 aa15.46■□□□□ 0.07
SNX6-210ENST00000557341 NPR3P17342 541 aa15.46■□□□□ 0.07
SNX6-210ENST00000557341 PLCG1P19174 1290 aa15.46■□□□□ 0.07
SNX6-210ENST00000557341 MCM4P33991 863 aa15.46■□□□□ 0.07
SNX6-210ENST00000557341 LIG4P49917 911 aa15.46■□□□□ 0.07
SNX6-210ENST00000557341 DHX8Q14562 1220 aaKnown RBP15.46■□□□□ 0.07
SNX6-210ENST00000557341 SF3A1Q15459 793 aaKnown RBP15.46■□□□□ 0.07
SNX6-210ENST00000557341 SLC10A6Q3KNW5 377 aa15.46■□□□□ 0.07
SNX6-210ENST00000557341 PABPC1LQ4VXU2 614 aaKnown RBP15.46■□□□□ 0.07
SNX6-210ENST00000557341 MTSS1LQ765P7 747 aa15.46■□□□□ 0.07
SNX6-210ENST00000557341 ZNF461Q8TAF7 563 aa15.46■□□□□ 0.07
SNX6-210ENST00000557341 FGF13Q92913 245 aa15.46■□□□□ 0.07
SNX6-210ENST00000557341 RTP3Q9BQQ7 232 aa15.46■□□□□ 0.07
SNX6-210ENST00000557341 PARVGQ9HBI0 331 aa15.46■□□□□ 0.07
SNX6-210ENST00000557341 BLOC1S4Q9NUP1 217 aa15.46■□□□□ 0.07
SNX6-210ENST00000557341 TUBGCP4Q9UGJ1 667 aa15.46■□□□□ 0.07
SNX6-210ENST00000557341 CA14Q9ULX7 337 aa15.46■□□□□ 0.07
SNX6-210ENST00000557341 WDR27A2RRH5 827 aa15.45■□□□□ 0.06
SNX6-210ENST00000557341 KRBA1A5PL33 1030 aa15.45■□□□□ 0.06
SNX6-210ENST00000557341 H7C4K7 107 aa15.45■□□□□ 0.06
SNX6-210ENST00000557341 LRG1P02750 347 aa15.45■□□□□ 0.06
SNX6-210ENST00000557341 KRT18P05783 430 aaKnown RBP15.45■□□□□ 0.06
SNX6-210ENST00000557341 CLTAP09496 248 aa15.45■□□□□ 0.06
SNX6-210ENST00000557341 PDCP20941 246 aa15.45■□□□□ 0.06
SNX6-210ENST00000557341 ZNF131P52739 623 aa15.45■□□□□ 0.06
SNX6-210ENST00000557341 GRIN1Q05586 938 aa15.45■□□□□ 0.06
SNX6-210ENST00000557341 PPP2R3AQ06190 1150 aa15.45■□□□□ 0.06
SNX6-210ENST00000557341 CUL4AQ13619 759 aa15.45■□□□□ 0.06
SNX6-210ENST00000557341 KARSQ15046 597 aaKnown RBP15.45■□□□□ 0.06
SNX6-210ENST00000557341 KYAT1Q16773 422 aa15.45■□□□□ 0.06
SNX6-210ENST00000557341 ZNF280DQ6N043 979 aa15.45■□□□□ 0.06
SNX6-210ENST00000557341 GPR152Q8TDT2 470 aa15.45■□□□□ 0.06
SNX6-210ENST00000557341 LRRC15Q8TF66 581 aa15.45■□□□□ 0.06
SNX6-210ENST00000557341 LARP4BQ92615 738 aaKnown RBP15.45■□□□□ 0.06
SNX6-210ENST00000557341 RAD54LQ92698 747 aa15.45■□□□□ 0.06
SNX6-210ENST00000557341 FGF14Q92915 247 aa15.45■□□□□ 0.06
SNX6-210ENST00000557341 SUSD3Q96L08 255 aa15.45■□□□□ 0.06
SNX6-210ENST00000557341 PLEKHA5Q9HAU0 1116 aa15.45■□□□□ 0.06
SNX6-210ENST00000557341 SLC2A4RGQ9NR83 387 aa15.45■□□□□ 0.06
SNX6-210ENST00000557341 HCFC1R1Q9NWW0 138 aa15.45■□□□□ 0.06
SNX6-210ENST00000557341 KCNH3Q9ULD8 1083 aa15.45■□□□□ 0.06
SNX6-210ENST00000557341 COL4A2P08572 1712 aa15.45■□□□□ 0.06
SNX6-210ENST00000557341 DENND4CQ5VZ89 1909 aa15.45■□□□□ 0.06
SNX6-210ENST00000557341 ZFHX2Q9C0A1 2572 aaPredicted RBP15.44■□□□□ 0.06
SNX6-210ENST00000557341 STK25O00506 426 aa15.44■□□□□ 0.06
SNX6-210ENST00000557341 PRRG1O14668 218 aa15.44■□□□□ 0.06
SNX6-210ENST00000557341 XPOTO43592 962 aaKnown RBP15.44■□□□□ 0.06
SNX6-210ENST00000557341 TBCAO75347 108 aaKnown RBP15.44■□□□□ 0.06
SNX6-210ENST00000557341 PIGRP01833 764 aa15.44■□□□□ 0.06
SNX6-210ENST00000557341 ATF2P15336 505 aa15.44■□□□□ 0.06
SNX6-210ENST00000557341 ELF1P32519 619 aa15.44■□□□□ 0.06
SNX6-210ENST00000557341 ABCD1P33897 745 aa15.44■□□□□ 0.06
SNX6-210ENST00000557341 MCM6Q14566 821 aa15.44■□□□□ 0.06
SNX6-210ENST00000557341 CTXN3Q4LDR2 81 aa15.44■□□□□ 0.06
SNX6-210ENST00000557341 NPAS3Q8IXF0 933 aa15.44■□□□□ 0.06
SNX6-210ENST00000557341 CCDC105Q8IYK2 499 aa15.44■□□□□ 0.06
SNX6-210ENST00000557341 MYCT1Q8N699 235 aa15.44■□□□□ 0.06
SNX6-210ENST00000557341 APPL2Q8NEU8 664 aa15.44■□□□□ 0.06
SNX6-210ENST00000557341 ITFG1Q8TB96 612 aa15.44■□□□□ 0.06
SNX6-210ENST00000557341 KIF12Q96FN5 646 aa15.44■□□□□ 0.06
SNX6-210ENST00000557341 HAPLN2Q9GZV7 340 aa15.44■□□□□ 0.06
SNX6-210ENST00000557341 ARHGEF3Q9NR81 526 aa15.44■□□□□ 0.06
SNX6-210ENST00000557341 DNMT3BQ9UBC3 853 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms