RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 RNF181Q9P0P0 153 aa5.04□□□□□ -1.6
CHD8-212ENST00000557329 ATP8A1Q9Y2Q0 1164 aa5.04□□□□□ -1.6
CHD8-212ENST00000557329 PRAG1Q86YV5 1406 aa5.04□□□□□ -1.6
CHD8-212ENST00000557329 LRRC37A3O60309 1634 aa5.04□□□□□ -1.6
CHD8-212ENST00000557329 PHRF1Q9P1Y6 1649 aaKnown RBP5.04□□□□□ -1.6
CHD8-212ENST00000557329 RGPD3A6NKT7 1758 aaPredicted RBP5.04□□□□□ -1.6
CHD8-212ENST00000557329 RGPD4Q7Z3J3 1758 aa5.04□□□□□ -1.6
CHD8-212ENST00000557329 ADCY9O60503 1353 aa5.04□□□□□ -1.6
CHD8-212ENST00000557329 USP19O94966 1318 aa5.03□□□□□ -1.6
CHD8-212ENST00000557329 FOXN1O15353 648 aa5.03□□□□□ -1.6
CHD8-212ENST00000557329 MGAT1P26572 445 aa5.03□□□□□ -1.6
CHD8-212ENST00000557329 ID4P47928 161 aa5.03□□□□□ -1.6
CHD8-212ENST00000557329 MAN2A2P49641 1150 aa5.03□□□□□ -1.6
CHD8-212ENST00000557329 GZMKP49863 264 aa5.03□□□□□ -1.6
CHD8-212ENST00000557329 LBX1P52954 281 aa5.03□□□□□ -1.6
CHD8-212ENST00000557329 CRHR2Q13324 411 aa5.03□□□□□ -1.6
CHD8-212ENST00000557329 CNGB1Q14028 1251 aaPredicted RBP5.03□□□□□ -1.6
CHD8-212ENST00000557329 ELAVL1Q15717 326 aaKnown RBP5.03□□□□□ -1.6
CHD8-212ENST00000557329 MUM1L1Q5H9M0 696 aa5.03□□□□□ -1.6
CHD8-212ENST00000557329 MDGA1Q8NFP4 955 aa5.03□□□□□ -1.6
CHD8-212ENST00000557329 ST8SIA2Q92186 375 aa5.03□□□□□ -1.6
CHD8-212ENST00000557329 EAF2Q96CJ1 260 aaPredicted RBP5.03□□□□□ -1.6
CHD8-212ENST00000557329 ABHD8Q96I13 439 aa5.03□□□□□ -1.6
CHD8-212ENST00000557329 EPC1Q9H2F5 836 aa5.03□□□□□ -1.6
CHD8-212ENST00000557329 AGO3Q9H9G7 860 aaKnown RBP5.03□□□□□ -1.6
CHD8-212ENST00000557329 SLC5A4Q9NY91 659 aa5.03□□□□□ -1.6
CHD8-212ENST00000557329 NCDNQ9UBB6 729 aa5.03□□□□□ -1.6
CHD8-212ENST00000557329 EVLQ9UI08 416 aaPredicted RBP5.03□□□□□ -1.6
CHD8-212ENST00000557329 HDAC5Q9UQL6 1122 aa5.03□□□□□ -1.6
CHD8-212ENST00000557329 PEAK1Q9H792 1746 aa5.03□□□□□ -1.6
CHD8-212ENST00000557329 CPDO75976 1380 aa5.03□□□□□ -1.6
CHD8-212ENST00000557329 RECQL4O94761 1208 aa5.02□□□□□ -1.61
CHD8-212ENST00000557329 HSP90B1P14625 803 aaKnown RBP5.02□□□□□ -1.61
CHD8-212ENST00000557329 CTCFP49711 727 aaPredicted RBP5.02□□□□□ -1.61
CHD8-212ENST00000557329 KRT85P78386 507 aa5.02□□□□□ -1.61
CHD8-212ENST00000557329 GRM1Q13255 1194 aa5.02□□□□□ -1.61
CHD8-212ENST00000557329 MRPL49Q13405 166 aaKnown RBP5.02□□□□□ -1.61
CHD8-212ENST00000557329 PDCD1Q15116 288 aa5.02□□□□□ -1.61
CHD8-212ENST00000557329 MUM1Q2TAK8 710 aa5.02□□□□□ -1.61
CHD8-212ENST00000557329 CT83Q5H943 113 aa5.02□□□□□ -1.61
CHD8-212ENST00000557329 NAIF1Q69YI7 327 aaPredicted RBP5.02□□□□□ -1.61
CHD8-212ENST00000557329 RNF207Q6ZRF8 634 aa5.02□□□□□ -1.61
CHD8-212ENST00000557329 HTR3DQ70Z44 454 aa5.02□□□□□ -1.61
CHD8-212ENST00000557329 TMPRSS6Q8IU80 811 aa5.02□□□□□ -1.61
CHD8-212ENST00000557329 C1orf210Q8IVY1 113 aa5.02□□□□□ -1.61
CHD8-212ENST00000557329 PALM2Q8IXS6 379 aa5.02□□□□□ -1.61
CHD8-212ENST00000557329 ZNF808Q8N4W9 903 aaPredicted RBP5.02□□□□□ -1.61
CHD8-212ENST00000557329 KCNH5Q8NCM2 988 aa5.02□□□□□ -1.61
CHD8-212ENST00000557329 PIK3C3Q8NEB9 887 aa5.02□□□□□ -1.61
CHD8-212ENST00000557329 ZNF480Q8WV37 535 aa5.02□□□□□ -1.61
CHD8-212ENST00000557329 TMEM176AQ96HP8 235 aa5.02□□□□□ -1.61
CHD8-212ENST00000557329 FDXACB1Q9BRP7 624 aaPredicted RBP5.02□□□□□ -1.61
CHD8-212ENST00000557329 ENKD1Q9H0I2 346 aa5.02□□□□□ -1.61
CHD8-212ENST00000557329 GREM2Q9H772 168 aa5.02□□□□□ -1.61
CHD8-212ENST00000557329 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.02□□□□□ -1.61
CHD8-212ENST00000557329 SH3BP1Q9Y3L3 701 aa5.02□□□□□ -1.61
CHD8-212ENST00000557329 SPEF1Q9Y4P9 236 aa5.02□□□□□ -1.61
CHD8-212ENST00000557329 KNDC1Q76NI1 1749 aa5.02□□□□□ -1.61
CHD8-212ENST00000557329 USP47Q96K76 1375 aa5.02□□□□□ -1.61
CHD8-212ENST00000557329 TULP4Q9NRJ4 1543 aa5.02□□□□□ -1.61
CHD8-212ENST00000557329 PIK3C2GO75747 1445 aa5.01□□□□□ -1.61
CHD8-212ENST00000557329 TNS2Q63HR2 1409 aa5.01□□□□□ -1.61
CHD8-212ENST00000557329 TRIM75PA6NK02 468 aa5.01□□□□□ -1.61
CHD8-212ENST00000557329 FAM171A2A8MVW0 826 aa5.01□□□□□ -1.61
CHD8-212ENST00000557329 B5MCH6 92 aa5.01□□□□□ -1.61
CHD8-212ENST00000557329 DIRC3C9JPN6 131 aa5.01□□□□□ -1.61
CHD8-212ENST00000557329 MATN3O15232 486 aa5.01□□□□□ -1.61
CHD8-212ENST00000557329 TEX33O43247 280 aa5.01□□□□□ -1.61
CHD8-212ENST00000557329 HOXA3O43365 443 aaPredicted RBP5.01□□□□□ -1.61
CHD8-212ENST00000557329 PRAMEF4O60810 478 aa5.01□□□□□ -1.61
CHD8-212ENST00000557329 FZD7O75084 574 aa5.01□□□□□ -1.61
CHD8-212ENST00000557329 CLEC2LP0C7M8 214 aa5.01□□□□□ -1.61
CHD8-212ENST00000557329 NCLP19338 710 aaKnown RBP5.01□□□□□ -1.61
CHD8-212ENST00000557329 PTH1RQ03431 593 aa5.01□□□□□ -1.61
CHD8-212ENST00000557329 KLF1Q13351 362 aaPredicted RBP5.01□□□□□ -1.61
CHD8-212ENST00000557329 FOXE3Q13461 319 aa5.01□□□□□ -1.61
CHD8-212ENST00000557329 TRIM25Q14258 630 aaKnown RBP5.01□□□□□ -1.61
CHD8-212ENST00000557329 UBE3CQ15386 1083 aa5.01□□□□□ -1.61
CHD8-212ENST00000557329 CDSNQ15517 529 aa5.01□□□□□ -1.61
CHD8-212ENST00000557329 NRN1LQ496H8 165 aa5.01□□□□□ -1.61
CHD8-212ENST00000557329 USP39Q53GS9 565 aaKnown RBP5.01□□□□□ -1.61
CHD8-212ENST00000557329 MIIPQ5JXC2 388 aa5.01□□□□□ -1.61
CHD8-212ENST00000557329 SPDYAQ5MJ70 313 aa5.01□□□□□ -1.61
CHD8-212ENST00000557329 LYSMD2Q8IV50 215 aa5.01□□□□□ -1.61
CHD8-212ENST00000557329 GPR156Q8NFN8 814 aa5.01□□□□□ -1.61
CHD8-212ENST00000557329 CYFIP2Q96F07 1278 aa5.01□□□□□ -1.61
CHD8-212ENST00000557329 ACE2Q9BYF1 805 aaPredicted RBP5.01□□□□□ -1.61
CHD8-212ENST00000557329 IFT122Q9HBG6 1241 aa5.01□□□□□ -1.61
CHD8-212ENST00000557329 RBM12Q9NTZ6 932 aaKnown RBP5.01□□□□□ -1.61
CHD8-212ENST00000557329 C14orf119Q9NWQ9 140 aa5.01□□□□□ -1.61
CHD8-212ENST00000557329 ING3Q9NXR8 418 aa5.01□□□□□ -1.61
CHD8-212ENST00000557329 SRRDQ9UH36 339 aa5.01□□□□□ -1.61
CHD8-212ENST00000557329 SAP30BPQ9UHR5 308 aaKnown RBP5.01□□□□□ -1.61
CHD8-212ENST00000557329 KCPQ6ZWJ8 1503 aa5.01□□□□□ -1.61
CHD8-212ENST00000557329 CCDC7Q96M83 1385 aa5.01□□□□□ -1.61
CHD8-212ENST00000557329 CRYBG1Q9Y4K1 1723 aa5□□□□□ -1.61
CHD8-212ENST00000557329 BTAF1O14981 1849 aa5□□□□□ -1.61
CHD8-212ENST00000557329 PPIP5K1Q6PFW1 1433 aa5□□□□□ -1.61
CHD8-212ENST00000557329 PRKD3O94806 890 aa5□□□□□ -1.61
CHD8-212ENST00000557329 ENDOD1O94919 500 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms