RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 FOXI1Q12951 378 aa5.46□□□□□ -1.54
PRPF39-210ENST00000556718 MAN2A1Q16706 1144 aa5.46□□□□□ -1.54
PRPF39-210ENST00000556718 UAP1L1Q3KQV9 507 aa5.46□□□□□ -1.54
PRPF39-210ENST00000556718 LONRF3Q496Y0 759 aa5.46□□□□□ -1.54
PRPF39-210ENST00000556718 UNC5BQ8IZJ1 945 aa5.46□□□□□ -1.54
PRPF39-210ENST00000556718 LCORLQ8N3X6 602 aa5.46□□□□□ -1.54
PRPF39-210ENST00000556718 MAP3K14Q99558 947 aa5.46□□□□□ -1.54
PRPF39-210ENST00000556718 FAM204AQ9H8W3 233 aa5.46□□□□□ -1.54
PRPF39-210ENST00000556718 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.46□□□□□ -1.54
PRPF39-210ENST00000556718 NUMBLQ9Y6R0 609 aa5.46□□□□□ -1.54
PRPF39-210ENST00000556718 PRSS38A1L453 326 aa5.45□□□□□ -1.54
PRPF39-210ENST00000556718 INO80B-WBP1J3KQ70 363 aa5.45□□□□□ -1.54
PRPF39-210ENST00000556718 RNASET2O00584 256 aaKnown RBP5.45□□□□□ -1.54
PRPF39-210ENST00000556718 PCDH8O95206 1070 aa5.45□□□□□ -1.54
PRPF39-210ENST00000556718 PHKG2P15735 406 aa5.45□□□□□ -1.54
PRPF39-210ENST00000556718 C5AR1P21730 350 aa5.45□□□□□ -1.54
PRPF39-210ENST00000556718 RNASE9P60153 205 aaKnown RBP5.45□□□□□ -1.54
PRPF39-210ENST00000556718 GRM3Q14832 879 aa5.45□□□□□ -1.54
PRPF39-210ENST00000556718 SAFBQ15424 915 aaKnown RBP eCLIP5.45□□□□□ -1.54
PRPF39-210ENST00000556718 MUM1Q2TAK8 710 aa5.45□□□□□ -1.54
PRPF39-210ENST00000556718 COBLL1Q53SF7 1204 aa5.45□□□□□ -1.54
PRPF39-210ENST00000556718 PITRM1Q5JRX3 1037 aa5.45□□□□□ -1.54
PRPF39-210ENST00000556718 CATIPQ7Z7H3 387 aa5.45□□□□□ -1.54
PRPF39-210ENST00000556718 C11orf96Q7Z7L8 435 aa5.45□□□□□ -1.54
PRPF39-210ENST00000556718 SYT12Q8IV01 421 aa5.45□□□□□ -1.54
PRPF39-210ENST00000556718 MSL3Q8N5Y2 521 aaKnown RBP5.45□□□□□ -1.54
PRPF39-210ENST00000556718 PJA1Q8NG27 643 aa5.45□□□□□ -1.54
PRPF39-210ENST00000556718 SVIPQ8NHG7 77 aa5.45□□□□□ -1.54
PRPF39-210ENST00000556718 SLC35G2Q8TBE7 412 aa5.45□□□□□ -1.54
PRPF39-210ENST00000556718 LINC00476Q8WZB0 136 aa5.45□□□□□ -1.54
PRPF39-210ENST00000556718 RUNDC1Q96C34 613 aa5.45□□□□□ -1.54
PRPF39-210ENST00000556718 TIFAQ96CG3 184 aa5.45□□□□□ -1.54
PRPF39-210ENST00000556718 IL17RAQ96F46 866 aa5.45□□□□□ -1.54
PRPF39-210ENST00000556718 HIST1H2AHQ96KK5 128 aa5.45□□□□□ -1.54
PRPF39-210ENST00000556718 HIST1H2AJQ99878 128 aa5.45□□□□□ -1.54
PRPF39-210ENST00000556718 ACE2Q9BYF1 805 aaPredicted RBP5.45□□□□□ -1.54
PRPF39-210ENST00000556718 INO80BQ9C086 356 aaPredicted RBP5.45□□□□□ -1.54
PRPF39-210ENST00000556718 RSAD1Q9HA92 442 aa5.45□□□□□ -1.54
PRPF39-210ENST00000556718 ANO9A1A5B4 782 aa5.44□□□□□ -1.54
PRPF39-210ENST00000556718 UNC119BA6NIH7 251 aa5.44□□□□□ -1.54
PRPF39-210ENST00000556718 ELL2O00472 640 aaPredicted RBP5.44□□□□□ -1.54
PRPF39-210ENST00000556718 LY86O95711 162 aa5.44□□□□□ -1.54
PRPF39-210ENST00000556718 LPLP06858 475 aa5.44□□□□□ -1.54
PRPF39-210ENST00000556718 XPAP23025 273 aaPredicted RBP5.44□□□□□ -1.54
PRPF39-210ENST00000556718 SEC24CP53992 1094 aa5.44□□□□□ -1.54
PRPF39-210ENST00000556718 LGALS4P56470 323 aa5.44□□□□□ -1.54
PRPF39-210ENST00000556718 ANO4Q32M45 955 aa5.44□□□□□ -1.54
PRPF39-210ENST00000556718 BEAN1Q3B7T3 259 aa5.44□□□□□ -1.54
PRPF39-210ENST00000556718 PRR16Q569H4 304 aa5.44□□□□□ -1.54
PRPF39-210ENST00000556718 DOK3Q7L591 496 aa5.44□□□□□ -1.54
PRPF39-210ENST00000556718 GPRIN1Q7Z2K8 1008 aa5.44□□□□□ -1.54
PRPF39-210ENST00000556718 KCNK18Q7Z418 384 aa5.44□□□□□ -1.54
PRPF39-210ENST00000556718 SRGAP1Q7Z6B7 1085 aa5.44□□□□□ -1.54
PRPF39-210ENST00000556718 GRAMD1CQ8IYS0 662 aa5.44□□□□□ -1.54
PRPF39-210ENST00000556718 PPM1NQ8N819 430 aa5.44□□□□□ -1.54
PRPF39-210ENST00000556718 OR14C36Q8NHC7 312 aa5.44□□□□□ -1.54
PRPF39-210ENST00000556718 KCTD10Q9H3F6 313 aa5.44□□□□□ -1.54
PRPF39-210ENST00000556718 IFT122Q9HBG6 1241 aa5.44□□□□□ -1.54
PRPF39-210ENST00000556718 DPP7Q9UHL4 492 aa5.44□□□□□ -1.54
PRPF39-210ENST00000556718 HDAC5Q9UQL6 1122 aa5.44□□□□□ -1.54
PRPF39-210ENST00000556718 COL11A2P13942 1736 aaPredicted RBP5.43□□□□□ -1.54
PRPF39-210ENST00000556718 LDHAP00338 332 aaKnown RBP5.43□□□□□ -1.54
PRPF39-210ENST00000556718 POU2F2P09086 479 aa5.43□□□□□ -1.54
PRPF39-210ENST00000556718 NHLH2Q02577 135 aa5.43□□□□□ -1.54
PRPF39-210ENST00000556718 ATAT1Q5SQI0 421 aa5.43□□□□□ -1.54
PRPF39-210ENST00000556718 ZBTB41Q5SVQ8 909 aa5.43□□□□□ -1.54
PRPF39-210ENST00000556718 PAPD7Q5XG87 772 aaKnown RBP5.43□□□□□ -1.54
PRPF39-210ENST00000556718 BTNL9Q6UXG8 535 aa5.43□□□□□ -1.54
PRPF39-210ENST00000556718 CAMKK1Q8N5S9 505 aa5.43□□□□□ -1.54
PRPF39-210ENST00000556718 FAM98AQ8NCA5 519 aaKnown RBP5.43□□□□□ -1.54
PRPF39-210ENST00000556718 CPEB3Q8NE35 698 aaKnown RBP5.43□□□□□ -1.54
PRPF39-210ENST00000556718 FATE1Q969F0 183 aa5.43□□□□□ -1.54
PRPF39-210ENST00000556718 HPS3Q969F9 1004 aa5.43□□□□□ -1.54
PRPF39-210ENST00000556718 CAVIN3Q969G5 261 aa5.43□□□□□ -1.54
PRPF39-210ENST00000556718 SLC2A13Q96QE2 648 aa5.43□□□□□ -1.54
PRPF39-210ENST00000556718 TAAR9Q96RI9 348 aa5.43□□□□□ -1.54
PRPF39-210ENST00000556718 DCLRE1CQ96SD1 692 aaKnown RBP5.43□□□□□ -1.54
PRPF39-210ENST00000556718 ADAM2Q99965 735 aa5.43□□□□□ -1.54
PRPF39-210ENST00000556718 FDXACB1Q9BRP7 624 aaPredicted RBP5.43□□□□□ -1.54
PRPF39-210ENST00000556718 SLC12A5Q9H2X9 1139 aa5.43□□□□□ -1.54
PRPF39-210ENST00000556718 FAM50BQ9Y247 325 aa5.43□□□□□ -1.54
PRPF39-210ENST00000556718 MYPNQ86TC9 1320 aa5.43□□□□□ -1.54
PRPF39-210ENST00000556718 NRP2O60462 931 aa5.42□□□□□ -1.54
PRPF39-210ENST00000556718 GPR15P49685 360 aa5.42□□□□□ -1.54
PRPF39-210ENST00000556718 GZMKP49863 264 aa5.42□□□□□ -1.54
PRPF39-210ENST00000556718 WNT3AP56704 352 aa5.42□□□□□ -1.54
PRPF39-210ENST00000556718 CDK17Q00537 523 aa5.42□□□□□ -1.54
PRPF39-210ENST00000556718 PPARAQ07869 468 aa5.42□□□□□ -1.54
PRPF39-210ENST00000556718 TP53BP2Q13625 1128 aa5.42□□□□□ -1.54
PRPF39-210ENST00000556718 ZNF267Q14586 743 aaPredicted RBP5.42□□□□□ -1.54
PRPF39-210ENST00000556718 ANKS6Q68DC2 871 aa5.42□□□□□ -1.54
PRPF39-210ENST00000556718 IL31Q6EBC2 164 aa5.42□□□□□ -1.54
PRPF39-210ENST00000556718 FAM180AQ6UWF9 173 aa5.42□□□□□ -1.54
PRPF39-210ENST00000556718 B3GNT9Q6UX72 402 aa5.42□□□□□ -1.54
PRPF39-210ENST00000556718 USP45Q70EL2 814 aa5.42□□□□□ -1.54
PRPF39-210ENST00000556718 CDYL2Q8N8U2 506 aa5.42□□□□□ -1.54
PRPF39-210ENST00000556718 SIMC1Q8NDZ2 872 aa5.42□□□□□ -1.54
PRPF39-210ENST00000556718 C1GALT1C1Q96EU7 318 aa5.42□□□□□ -1.54
PRPF39-210ENST00000556718 MVB12AQ96EY5 273 aa5.42□□□□□ -1.54
PRPF39-210ENST00000556718 GTPBP4Q9BZE4 634 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms