RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 MINDY3Q9H8M7 445 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 DIS3Q9Y2L1 958 aaKnown RBP10.84□□□□□ -0.67
TMEM260-211ENST00000556648 ANK1P16157 1881 aa10.83□□□□□ -0.68
TMEM260-211ENST00000556648 MIF4GDA9UHW6 222 aaKnown RBP10.83□□□□□ -0.68
TMEM260-211ENST00000556648 TOM1L1O75674 476 aa10.83□□□□□ -0.68
TMEM260-211ENST00000556648 LDHAP00338 332 aaKnown RBP10.83□□□□□ -0.68
TMEM260-211ENST00000556648 CYP1A1P04798 512 aaPredicted RBP10.83□□□□□ -0.68
TMEM260-211ENST00000556648 CTNNA1P35221 906 aaKnown RBP10.83□□□□□ -0.68
TMEM260-211ENST00000556648 HSPA9P38646 679 aaKnown RBP10.83□□□□□ -0.68
TMEM260-211ENST00000556648 MYL6P60660 151 aa10.83□□□□□ -0.68
TMEM260-211ENST00000556648 OSTNP61366 133 aa10.83□□□□□ -0.68
TMEM260-211ENST00000556648 ARHGAP1Q07960 439 aa10.83□□□□□ -0.68
TMEM260-211ENST00000556648 UAP1Q16222 522 aaPredicted RBP10.83□□□□□ -0.68
TMEM260-211ENST00000556648 ZPBP2Q6X784 338 aa10.83□□□□□ -0.68
TMEM260-211ENST00000556648 MON1BQ7L1V2 547 aa10.83□□□□□ -0.68
TMEM260-211ENST00000556648 PLPPR4Q7Z2D5 763 aa10.83□□□□□ -0.68
TMEM260-211ENST00000556648 TMEM192Q8IY95 271 aa10.83□□□□□ -0.68
TMEM260-211ENST00000556648 MREGQ8N565 214 aa10.83□□□□□ -0.68
TMEM260-211ENST00000556648 UBR7Q8N806 425 aa10.83□□□□□ -0.68
TMEM260-211ENST00000556648 WHAMMQ8TF30 809 aa10.83□□□□□ -0.68
TMEM260-211ENST00000556648 C11orf70Q9BRQ4 267 aa10.83□□□□□ -0.68
TMEM260-211ENST00000556648 TCHPQ9BT92 498 aa10.83□□□□□ -0.68
TMEM260-211ENST00000556648 WNT8AQ9H1J5 351 aa10.83□□□□□ -0.68
TMEM260-211ENST00000556648 MROH8Q9H579 483 aa10.83□□□□□ -0.68
TMEM260-211ENST00000556648 PSD3Q9NYI0 1048 aa10.83□□□□□ -0.68
TMEM260-211ENST00000556648 UVRAGQ9P2Y5 699 aa10.83□□□□□ -0.68
TMEM260-211ENST00000556648 ANAPC7Q9UJX3 599 aa10.83□□□□□ -0.68
TMEM260-211ENST00000556648 PCDHB2Q9Y5E7 798 aa10.83□□□□□ -0.68
TMEM260-211ENST00000556648 CSDE1O75534 798 aaKnown RBP10.82□□□□□ -0.68
TMEM260-211ENST00000556648 KRT14P02533 472 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 IQCF3P0C7M6 154 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 CTNNA2P26232 953 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 PTGIRP43119 386 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 DR1Q01658 176 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 MCL1Q07820 350 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 SNAPC2Q13487 334 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 CUL1Q13616 776 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 SIX1Q15475 284 aaPredicted RBP10.82□□□□□ -0.68
TMEM260-211ENST00000556648 CFAP58Q5T655 872 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 ALS2CLQ60I27 953 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 DPY19L2Q6NUT2 758 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 EFCAB12Q6NXP0 572 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 MAMDC4Q6UXC1 1216 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 ZBTB8OSQ8IWT0 167 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 EFCAB13Q8IY85 973 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 IQCKQ8N0W5 287 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 SH2D3CQ8N5H7 860 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 CCDC26Q8TAB7 109 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 ZC3H15Q8WU90 426 aaKnown RBP10.82□□□□□ -0.68
TMEM260-211ENST00000556648 MPHOSPH6Q99547 160 aaKnown RBP10.82□□□□□ -0.68
TMEM260-211ENST00000556648 HERPUD2Q9BSE4 406 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 CPSF3Q9UKF6 684 aaKnown RBP10.82□□□□□ -0.68
TMEM260-211ENST00000556648 EVPLQ92817 2033 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 GOLGA6CA6NDK9 693 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 INO80B-WBP1J3KQ70 363 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 O00370 1275 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 OGTO15294 1046 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 MEFVO15553 781 aaPredicted RBP10.82□□□□□ -0.68
TMEM260-211ENST00000556648 PHF2O75151 1096 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 C22orf31O95567 290 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 HOXC6P09630 235 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 ZNF286BP0CG31 522 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 GOLGA6DP0CG33 693 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 CD58P19256 250 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 SCP2P22307 547 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 GNA15P30679 374 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 MAPK4P31152 587 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 HSD17B3P37058 310 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 EFNA5P52803 228 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 NOMO3P69849 1222 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 CENPCQ03188 943 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 MBTD1Q05BQ5 628 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 TTLL4Q14679 1199 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 MAPK6Q16659 721 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 SEL1L2Q5TEA6 688 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 MAP1SQ66K74 1059 aaPredicted RBP10.82□□□□□ -0.68
TMEM260-211ENST00000556648 TAPT1Q6NXT6 567 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 KCNV1Q6PIU1 500 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 SCARA5Q6ZMJ2 495 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 MMS22LQ6ZRQ5 1243 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 JAMLQ86YT9 394 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 THNSL1Q8IYQ7 743 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 OR2W6PQ8NHA6 318 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 TCP11Q8WWU5 503 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 SEC14L1Q92503 715 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 INO80BQ9C086 356 aaPredicted RBP10.82□□□□□ -0.68
TMEM260-211ENST00000556648 LRRC4CQ9HCJ2 640 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 GOLGA6AQ9NYA3 693 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 PLAAQ9Y263 795 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 PCDHA3Q9Y5H8 950 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 ZSWIM8A7E2V4 1837 aa10.82□□□□□ -0.68
TMEM260-211ENST00000556648 GOLGA6L10A0A0M3HER8 536 aa10.81□□□□□ -0.68
TMEM260-211ENST00000556648 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.81□□□□□ -0.68
TMEM260-211ENST00000556648 BTBD19C9JJ37 291 aa10.81□□□□□ -0.68
TMEM260-211ENST00000556648 PDHXO00330 501 aa10.81□□□□□ -0.68
TMEM260-211ENST00000556648 THAP12O43422 761 aa10.81□□□□□ -0.68
TMEM260-211ENST00000556648 ASS1P00966 412 aaKnown RBP10.81□□□□□ -0.68
TMEM260-211ENST00000556648 RARAP10276 462 aa10.81□□□□□ -0.68
TMEM260-211ENST00000556648 PROZP22891 400 aa10.81□□□□□ -0.68
TMEM260-211ENST00000556648 BRD2P25440 801 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms