RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 MARCH11A6NNE9 402 aa5.95□□□□□ -1.46
SCFD1-221ENST00000556534 SLC16A6O15403 523 aa5.95□□□□□ -1.46
SCFD1-221ENST00000556534 PRPF3O43395 683 aaKnown RBP5.95□□□□□ -1.46
SCFD1-221ENST00000556534 RECQL4O94761 1208 aa5.95□□□□□ -1.46
SCFD1-221ENST00000556534 TACR2P21452 398 aa5.95□□□□□ -1.46
SCFD1-221ENST00000556534 GCSHP23434 173 aa5.95□□□□□ -1.46
SCFD1-221ENST00000556534 MAP2K6P52564 334 aa5.95□□□□□ -1.46
SCFD1-221ENST00000556534 HK3P52790 923 aa5.95□□□□□ -1.46
SCFD1-221ENST00000556534 NOGQ13253 232 aa5.95□□□□□ -1.46
SCFD1-221ENST00000556534 SNAPC2Q13487 334 aa5.95□□□□□ -1.46
SCFD1-221ENST00000556534 KHDC1Q4VXA5 237 aaKnown RBP5.95□□□□□ -1.46
SCFD1-221ENST00000556534 FAM102BQ5T8I3 360 aa5.95□□□□□ -1.46
SCFD1-221ENST00000556534 LCE5AQ5TCM9 118 aa5.95□□□□□ -1.46
SCFD1-221ENST00000556534 CXorf57Q6NSI4 855 aaKnown RBP5.95□□□□□ -1.46
SCFD1-221ENST00000556534 LRRC55Q6ZSA7 311 aa5.95□□□□□ -1.46
SCFD1-221ENST00000556534 OR56A1Q8NGH5 318 aa5.95□□□□□ -1.46
SCFD1-221ENST00000556534 DIS3LQ8TF46 1054 aaKnown RBP5.95□□□□□ -1.46
SCFD1-221ENST00000556534 SLC25A43Q8WUT9 341 aaPredicted RBP5.95□□□□□ -1.46
SCFD1-221ENST00000556534 KLHL11Q9NVR0 708 aa5.95□□□□□ -1.46
SCFD1-221ENST00000556534 GPRC5BQ9NZH0 403 aa5.95□□□□□ -1.46
SCFD1-221ENST00000556534 USP15Q9Y4E8 981 aaPredicted RBP5.95□□□□□ -1.46
SCFD1-221ENST00000556534 F2RL2O00254 374 aa5.94□□□□□ -1.46
SCFD1-221ENST00000556534 TSPAN6O43657 245 aa5.94□□□□□ -1.46
SCFD1-221ENST00000556534 RPS6KA4O75676 772 aa5.94□□□□□ -1.46
SCFD1-221ENST00000556534 NCR1O76036 304 aa5.94□□□□□ -1.46
SCFD1-221ENST00000556534 FTLP02792 175 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-221ENST00000556534 MTHFD1P11586 935 aaKnown RBP5.94□□□□□ -1.46
SCFD1-221ENST00000556534 SLFN5Q08AF3 891 aa5.94□□□□□ -1.46
SCFD1-221ENST00000556534 LSM12Q3MHD2 195 aaKnown RBP5.94□□□□□ -1.46
SCFD1-221ENST00000556534 THEMIS2Q5TEJ8 643 aa5.94□□□□□ -1.46
SCFD1-221ENST00000556534 NXNQ6DKJ4 435 aa5.94□□□□□ -1.46
SCFD1-221ENST00000556534 RHOUQ7L0Q8 258 aa5.94□□□□□ -1.46
SCFD1-221ENST00000556534 GRAMD1CQ8IYS0 662 aa5.94□□□□□ -1.46
SCFD1-221ENST00000556534 CHPFQ8IZ52 775 aa5.94□□□□□ -1.46
SCFD1-221ENST00000556534 C3orf20Q8ND61 904 aa5.94□□□□□ -1.46
SCFD1-221ENST00000556534 IL17RDQ8NFM7 739 aa5.94□□□□□ -1.46
SCFD1-221ENST00000556534 TAAR9Q96RI9 348 aa5.94□□□□□ -1.46
SCFD1-221ENST00000556534 PACSIN1Q9BY11 444 aa5.94□□□□□ -1.46
SCFD1-221ENST00000556534 KRTAP17-1Q9BYP8 105 aa5.94□□□□□ -1.46
SCFD1-221ENST00000556534 GSTO2Q9H4Y5 243 aa5.94□□□□□ -1.46
SCFD1-221ENST00000556534 NOB1Q9ULX3 412 aaKnown RBP5.94□□□□□ -1.46
SCFD1-221ENST00000556534 POLHQ9Y253 713 aa5.94□□□□□ -1.46
SCFD1-221ENST00000556534 GAGE12BA1L429 117 aa5.93□□□□□ -1.46
SCFD1-221ENST00000556534 CCDC78A2IDD5 438 aa5.93□□□□□ -1.46
SCFD1-221ENST00000556534 GAGE12HA6NDE8 117 aa5.93□□□□□ -1.46
SCFD1-221ENST00000556534 NPIPB8E9PQR5 432 aa5.93□□□□□ -1.46
SCFD1-221ENST00000556534 AP1G1O43747 822 aa5.93□□□□□ -1.46
SCFD1-221ENST00000556534 NARSO43776 548 aaKnown RBP5.93□□□□□ -1.46
SCFD1-221ENST00000556534 C6P13671 934 aa5.93□□□□□ -1.46
SCFD1-221ENST00000556534 HSPA6P17066 643 aa5.93□□□□□ -1.46
SCFD1-221ENST00000556534 ZNF365Q70YC5 407 aa5.93□□□□□ -1.46
SCFD1-221ENST00000556534 HEATR3Q7Z4Q2 680 aa5.93□□□□□ -1.46
SCFD1-221ENST00000556534 TCEAL8Q8IYN2 117 aa5.93□□□□□ -1.46
SCFD1-221ENST00000556534 FITM2Q8N6M3 262 aa5.93□□□□□ -1.46
SCFD1-221ENST00000556534 NLGN4YQ8NFZ3 816 aaPredicted RBP5.93□□□□□ -1.46
SCFD1-221ENST00000556534 ZNF483Q8TF39 744 aaPredicted RBP5.93□□□□□ -1.46
SCFD1-221ENST00000556534 LENG9Q96B70 501 aa5.93□□□□□ -1.46
SCFD1-221ENST00000556534 LRGUKQ96M69 825 aa5.93□□□□□ -1.46
SCFD1-221ENST00000556534 FAM193BQ96PV7 902 aaPredicted RBP5.93□□□□□ -1.46
SCFD1-221ENST00000556534 ZNF341Q9BYN7 854 aa5.93□□□□□ -1.46
SCFD1-221ENST00000556534 AKIP1Q9NQ31 210 aa5.93□□□□□ -1.46
SCFD1-221ENST00000556534 MAN1C1Q9NR34 630 aa5.93□□□□□ -1.46
SCFD1-221ENST00000556534 JKAMPQ9P055 326 aa5.93□□□□□ -1.46
SCFD1-221ENST00000556534 TCEAL9Q9UHQ7 104 aa5.93□□□□□ -1.46
SCFD1-221ENST00000556534 PCDHA3Q9Y5H8 950 aa5.93□□□□□ -1.46
SCFD1-221ENST00000556534 RNASET2O00584 256 aaKnown RBP5.92□□□□□ -1.46
SCFD1-221ENST00000556534 SLC43A1O75387 559 aa5.92□□□□□ -1.46
SCFD1-221ENST00000556534 ZNF202O95125 648 aa5.92□□□□□ -1.46
SCFD1-221ENST00000556534 ARIH2O95376 493 aa5.92□□□□□ -1.46
SCFD1-221ENST00000556534 ALDH2P05091 517 aa5.92□□□□□ -1.46
SCFD1-221ENST00000556534 ELANEP08246 267 aa5.92□□□□□ -1.46
SCFD1-221ENST00000556534 SPATA31D3P0C874 917 aa5.92□□□□□ -1.46
SCFD1-221ENST00000556534 NOMO3P69849 1222 aa5.92□□□□□ -1.46
SCFD1-221ENST00000556534 OCA2Q04671 838 aa5.92□□□□□ -1.46
SCFD1-221ENST00000556534 GTF2H3Q13889 308 aa5.92□□□□□ -1.46
SCFD1-221ENST00000556534 BEAN1Q3B7T3 259 aa5.92□□□□□ -1.46
SCFD1-221ENST00000556534 NOMO2Q5JPE7 1267 aa5.92□□□□□ -1.46
SCFD1-221ENST00000556534 SPATA31D4Q6ZUB0 917 aa5.92□□□□□ -1.46
SCFD1-221ENST00000556534 FAM90A1Q86YD7 464 aa5.92□□□□□ -1.46
SCFD1-221ENST00000556534 MAGEB6Q8N7X4 407 aa5.92□□□□□ -1.46
SCFD1-221ENST00000556534 RUNDC1Q96C34 613 aa5.92□□□□□ -1.46
SCFD1-221ENST00000556534 CLIP3Q96DZ5 547 aa5.92□□□□□ -1.46
SCFD1-221ENST00000556534 C1GALT1C1Q96EU7 318 aa5.92□□□□□ -1.46
SCFD1-221ENST00000556534 ZSWIM1Q9BR11 485 aa5.92□□□□□ -1.46
SCFD1-221ENST00000556534 NRDE2Q9H7Z3 1164 aa5.92□□□□□ -1.46
SCFD1-221ENST00000556534 METTL14Q9HCE5 456 aaKnown RBP5.92□□□□□ -1.46
SCFD1-221ENST00000556534 KMT5AQ9NQR1 393 aa5.92□□□□□ -1.46
SCFD1-221ENST00000556534 SLC2A4RGQ9NR83 387 aa5.92□□□□□ -1.46
SCFD1-221ENST00000556534 LMBRD1Q9NUN5 540 aa5.92□□□□□ -1.46
SCFD1-221ENST00000556534 ABCF2Q9UG63 623 aa5.92□□□□□ -1.46
SCFD1-221ENST00000556534 SLC45A2Q9UMX9 530 aa5.92□□□□□ -1.46
SCFD1-221ENST00000556534 A0A1B0GTW7 788 aa5.91□□□□□ -1.46
SCFD1-221ENST00000556534 H3BML4 177 aa5.91□□□□□ -1.46
SCFD1-221ENST00000556534 CFIP05156 583 aa5.91□□□□□ -1.46
SCFD1-221ENST00000556534 FTH1P19P0C7X4 201 aa5.91□□□□□ -1.46
SCFD1-221ENST00000556534 FCER1AP12319 257 aa5.91□□□□□ -1.46
SCFD1-221ENST00000556534 TYRP14679 529 aa5.91□□□□□ -1.46
SCFD1-221ENST00000556534 FGFR4P22455 802 aa5.91□□□□□ -1.46
SCFD1-221ENST00000556534 PRDX5P30044 214 aa5.91□□□□□ -1.46
SCFD1-221ENST00000556534 IL12RB1P42701 662 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms