RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 COL4A4P53420 1690 aaPredicted RBP10.52□□□□□ -0.73
SRP54-210ENST00000556380 UNC80Q8N2C7 3258 aa10.52□□□□□ -0.73
SRP54-210ENST00000556380 NCOR1O75376 2440 aa10.51□□□□□ -0.73
SRP54-210ENST00000556380 LACTBL1A8MY62 500 aa10.51□□□□□ -0.73
SRP54-210ENST00000556380 RHOBTB3O94955 611 aa10.51□□□□□ -0.73
SRP54-210ENST00000556380 RPN1P04843 607 aaKnown RBP10.51□□□□□ -0.73
SRP54-210ENST00000556380 CXCL8P10145 99 aa10.51□□□□□ -0.73
SRP54-210ENST00000556380 OR1G1P47890 313 aa10.51□□□□□ -0.73
SRP54-210ENST00000556380 ACOT2P49753 483 aa10.51□□□□□ -0.73
SRP54-210ENST00000556380 YARSP54577 528 aaKnown RBP10.51□□□□□ -0.73
SRP54-210ENST00000556380 COPS2P61201 443 aa10.51□□□□□ -0.73
SRP54-210ENST00000556380 KCNB1Q14721 858 aa10.51□□□□□ -0.73
SRP54-210ENST00000556380 TIGD5Q53EQ6 642 aa10.51□□□□□ -0.73
SRP54-210ENST00000556380 GLRA4Q5JXX5 417 aa10.51□□□□□ -0.73
SRP54-210ENST00000556380 PDE12Q6L8Q7 609 aaKnown RBP10.51□□□□□ -0.73
SRP54-210ENST00000556380 KANK3Q6NY19 840 aa10.51□□□□□ -0.73
SRP54-210ENST00000556380 TAS1R1Q7RTX1 841 aa10.51□□□□□ -0.73
SRP54-210ENST00000556380 SYCP3Q8IZU3 236 aa10.51□□□□□ -0.73
SRP54-210ENST00000556380 MRPL43Q8N983 215 aaKnown RBP10.51□□□□□ -0.73
SRP54-210ENST00000556380 PPM1EQ8WY54 764 aa10.51□□□□□ -0.73
SRP54-210ENST00000556380 RABGGTAQ92696 567 aa10.51□□□□□ -0.73
SRP54-210ENST00000556380 C18orf25Q96B23 403 aaPredicted RBP10.51□□□□□ -0.73
SRP54-210ENST00000556380 TMEM169Q96HH4 297 aa10.51□□□□□ -0.73
SRP54-210ENST00000556380 RPS6KC1Q96S38 1066 aa10.51□□□□□ -0.73
SRP54-210ENST00000556380 CBWD1Q9BRT8 395 aa10.51□□□□□ -0.73
SRP54-210ENST00000556380 COLEC11Q9BWP8 271 aa10.51□□□□□ -0.73
SRP54-210ENST00000556380 NSUN3Q9H649 340 aaKnown RBP10.51□□□□□ -0.73
SRP54-210ENST00000556380 NGRNQ9NPE2 291 aaKnown RBP10.51□□□□□ -0.73
SRP54-210ENST00000556380 PRDM6Q9NQX0 595 aa10.51□□□□□ -0.73
SRP54-210ENST00000556380 PUF60Q9UHX1 559 aaKnown RBP10.51□□□□□ -0.73
SRP54-210ENST00000556380 UBE4BO95155 1302 aa10.51□□□□□ -0.73
SRP54-210ENST00000556380 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.5□□□□□ -0.73
SRP54-210ENST00000556380 C2orf71A6NGG8 1288 aa10.5□□□□□ -0.73
SRP54-210ENST00000556380 CASTOR2A6NHX0 329 aa10.5□□□□□ -0.73
SRP54-210ENST00000556380 HIDE1A8MVS5 230 aa10.5□□□□□ -0.73
SRP54-210ENST00000556380 TMEM189-UBE2V1I3L0A0 370 aa10.5□□□□□ -0.73
SRP54-210ENST00000556380 CTSAP10619 480 aa10.5□□□□□ -0.73
SRP54-210ENST00000556380 GTF2F1P35269 517 aaKnown RBP eCLIP10.5□□□□□ -0.73
SRP54-210ENST00000556380 MATR3P43243 847 aaKnown RBP eCLIP10.5□□□□□ -0.73
SRP54-210ENST00000556380 UBE2HP62256 183 aa10.5□□□□□ -0.73
SRP54-210ENST00000556380 SNRPFP62306 86 aaKnown RBP10.5□□□□□ -0.73
SRP54-210ENST00000556380 HYAL1Q12794 435 aa10.5□□□□□ -0.73
SRP54-210ENST00000556380 PNOCQ13519 176 aa10.5□□□□□ -0.73
SRP54-210ENST00000556380 HSP90AA2PQ14568 343 aaPredicted RBP10.5□□□□□ -0.73
SRP54-210ENST00000556380 UPP1Q16831 310 aa10.5□□□□□ -0.73
SRP54-210ENST00000556380 KNOP1Q1ED39 458 aaKnown RBP10.5□□□□□ -0.73
SRP54-210ENST00000556380 CTC1Q2NKJ3 1217 aa10.5□□□□□ -0.73
SRP54-210ENST00000556380 DCLRE1AQ6PJP8 1040 aa10.5□□□□□ -0.73
SRP54-210ENST00000556380 STXBP4Q6ZWJ1 553 aa10.5□□□□□ -0.73
SRP54-210ENST00000556380 ADGRD2Q7Z7M1 963 aa10.5□□□□□ -0.73
SRP54-210ENST00000556380 VPS52Q8N1B4 723 aa10.5□□□□□ -0.73
SRP54-210ENST00000556380 MICALL1Q8N3F8 863 aa10.5□□□□□ -0.73
SRP54-210ENST00000556380 TMEM130Q8N3G9 435 aa10.5□□□□□ -0.73
SRP54-210ENST00000556380 TMEM174Q8WUU8 243 aa10.5□□□□□ -0.73
SRP54-210ENST00000556380 POMGNT1Q8WZA1 660 aa10.5□□□□□ -0.73
SRP54-210ENST00000556380 FBXL18Q96ME1 805 aa10.5□□□□□ -0.73
SRP54-210ENST00000556380 TSPAN18Q96SJ8 248 aa10.5□□□□□ -0.73
SRP54-210ENST00000556380 TCF25Q9BQ70 676 aa10.5□□□□□ -0.73
SRP54-210ENST00000556380 GPR62Q9BZJ7 368 aa10.5□□□□□ -0.73
SRP54-210ENST00000556380 ZBP1Q9H171 429 aa10.5□□□□□ -0.73
SRP54-210ENST00000556380 RPF1Q9H9Y2 349 aaKnown RBP10.5□□□□□ -0.73
SRP54-210ENST00000556380 CHST7Q9NS84 486 aa10.5□□□□□ -0.73
SRP54-210ENST00000556380 EXOC1Q9NV70 894 aa10.5□□□□□ -0.73
SRP54-210ENST00000556380 SLC38A7Q9NVC3 462 aa10.5□□□□□ -0.73
SRP54-210ENST00000556380 STK39Q9UEW8 545 aa10.5□□□□□ -0.73
SRP54-210ENST00000556380 IRAK3Q9Y616 596 aa10.5□□□□□ -0.73
SRP54-210ENST00000556380 RCCD1A6NED2 376 aa10.49□□□□□ -0.73
SRP54-210ENST00000556380 KIAA0391O15091 583 aaKnown RBP10.49□□□□□ -0.73
SRP54-210ENST00000556380 EXTL3O43909 919 aa10.49□□□□□ -0.73
SRP54-210ENST00000556380 PRPF40AO75400 957 aaKnown RBP10.49□□□□□ -0.73
SRP54-210ENST00000556380 KIF4AO95239 1232 aa10.49□□□□□ -0.73
SRP54-210ENST00000556380 CXCL14O95715 111 aa10.49□□□□□ -0.73
SRP54-210ENST00000556380 SOD2P04179 222 aa10.49□□□□□ -0.73
SRP54-210ENST00000556380 CYP3A5P20815 502 aa10.49□□□□□ -0.73
SRP54-210ENST00000556380 RPL9P32969 192 aaKnown RBP10.49□□□□□ -0.73
SRP54-210ENST00000556380 LTBRP36941 435 aa10.49□□□□□ -0.73
SRP54-210ENST00000556380 CLCNKBP51801 687 aa10.49□□□□□ -0.73
SRP54-210ENST00000556380 WNT7BP56706 349 aa10.49□□□□□ -0.73
SRP54-210ENST00000556380 SPAG1Q07617 926 aa10.49□□□□□ -0.73
SRP54-210ENST00000556380 KCNC3Q14003 757 aa10.49□□□□□ -0.73
SRP54-210ENST00000556380 KIAA0319Q5VV43 1072 aa10.49□□□□□ -0.73
SRP54-210ENST00000556380 TMC7Q7Z402 723 aa10.49□□□□□ -0.73
SRP54-210ENST00000556380 CD302Q8IX05 232 aa10.49□□□□□ -0.73
SRP54-210ENST00000556380 NELFCDQ8IXH7 590 aa10.49□□□□□ -0.73
SRP54-210ENST00000556380 C12orf56Q8IXR9 622 aa10.49□□□□□ -0.73
SRP54-210ENST00000556380 GPR65Q8IYL9 337 aa10.49□□□□□ -0.73
SRP54-210ENST00000556380 C3orf58Q8NDZ4 430 aa10.49□□□□□ -0.73
SRP54-210ENST00000556380 SAAL1Q96ER3 474 aa10.49□□□□□ -0.73
SRP54-210ENST00000556380 UROC1Q96N76 676 aa10.49□□□□□ -0.73
SRP54-210ENST00000556380 FAM213AQ9BRX8 229 aa10.49□□□□□ -0.73
SRP54-210ENST00000556380 HERC2P3Q9BVR0 1158 aa10.49□□□□□ -0.73
SRP54-210ENST00000556380 KCTD10Q9H3F6 313 aa10.49□□□□□ -0.73
SRP54-210ENST00000556380 ASB7Q9H672 318 aa10.49□□□□□ -0.73
SRP54-210ENST00000556380 GOLGA2P5Q9HBQ8 144 aa10.49□□□□□ -0.73
SRP54-210ENST00000556380 AGPAT3Q9NRZ7 376 aa10.49□□□□□ -0.73
SRP54-210ENST00000556380 DMAC2Q9NW81 257 aa10.49□□□□□ -0.73
SRP54-210ENST00000556380 ADAM28Q9UKQ2 775 aa10.49□□□□□ -0.73
SRP54-210ENST00000556380 PLXNA4Q9HCM2 1894 aa10.49□□□□□ -0.73
SRP54-210ENST00000556380 TRIP11Q15643 1979 aa10.48□□□□□ -0.73
SRP54-210ENST00000556380 GOLGA8IPA6NC78 632 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms