RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 CREMQ03060 361 aa6.81□□□□□ -1.32
PRPF39-209ENST00000556353 ATP2B3Q16720 1220 aa6.81□□□□□ -1.32
PRPF39-209ENST00000556353 PGM2L1Q6PCE3 622 aa6.81□□□□□ -1.32
PRPF39-209ENST00000556353 RHOT1Q8IXI2 618 aa6.81□□□□□ -1.32
PRPF39-209ENST00000556353 ZGPATQ8N5A5 531 aaKnown RBP6.81□□□□□ -1.32
PRPF39-209ENST00000556353 NRG4Q8WWG1 115 aa6.81□□□□□ -1.32
PRPF39-209ENST00000556353 DPF2Q92785 391 aa6.81□□□□□ -1.32
PRPF39-209ENST00000556353 BOD1Q96IK1 185 aa6.81□□□□□ -1.32
PRPF39-209ENST00000556353 KRTAP17-1Q9BYP8 105 aa6.81□□□□□ -1.32
PRPF39-209ENST00000556353 SYNPO2LQ9H987 977 aa6.81□□□□□ -1.32
PRPF39-209ENST00000556353 KCNE5Q9UJ90 142 aa6.81□□□□□ -1.32
PRPF39-209ENST00000556353 AATKQ6ZMQ8 1374 aa6.81□□□□□ -1.32
PRPF39-209ENST00000556353 KIF21AQ7Z4S6 1674 aa6.81□□□□□ -1.32
PRPF39-209ENST00000556353 NESP48681 1621 aa6.8□□□□□ -1.32
PRPF39-209ENST00000556353 KIAA0355O15063 1070 aa6.8□□□□□ -1.32
PRPF39-209ENST00000556353 PRSS23O95084 383 aa6.8□□□□□ -1.32
PRPF39-209ENST00000556353 ESRRBO95718 433 aa6.8□□□□□ -1.32
PRPF39-209ENST00000556353 CKBP12277 381 aa6.8□□□□□ -1.32
PRPF39-209ENST00000556353 FOXI1Q12951 378 aa6.8□□□□□ -1.32
PRPF39-209ENST00000556353 MPP3Q13368 585 aa6.8□□□□□ -1.32
PRPF39-209ENST00000556353 GPR149Q86SP6 731 aa6.8□□□□□ -1.32
PRPF39-209ENST00000556353 SLC44A3Q8N4M1 653 aa6.8□□□□□ -1.32
PRPF39-209ENST00000556353 FITM2Q8N6M3 262 aa6.8□□□□□ -1.32
PRPF39-209ENST00000556353 THOC2Q8NI27 1593 aaKnown RBP6.8□□□□□ -1.32
PRPF39-209ENST00000556353 GALNT9Q9HCQ5 603 aa6.8□□□□□ -1.32
PRPF39-209ENST00000556353 BAZ1AQ9NRL2 1556 aaPredicted RBP6.8□□□□□ -1.32
PRPF39-209ENST00000556353 TMEM74BQ9NUR3 256 aa6.8□□□□□ -1.32
PRPF39-209ENST00000556353 MKS1Q9NXB0 559 aa6.8□□□□□ -1.32
PRPF39-209ENST00000556353 ATP8A1Q9Y2Q0 1164 aa6.8□□□□□ -1.32
PRPF39-209ENST00000556353 MTO1Q9Y2Z2 717 aaKnown RBP6.8□□□□□ -1.32
PRPF39-209ENST00000556353 MROH2BQ7Z745 1585 aa6.79□□□□□ -1.32
PRPF39-209ENST00000556353 TCRBV7S2A1N4TA0A589 114 aa6.79□□□□□ -1.32
PRPF39-209ENST00000556353 TYRP1P17643 537 aa6.79□□□□□ -1.32
PRPF39-209ENST00000556353 WASP42768 502 aa6.79□□□□□ -1.32
PRPF39-209ENST00000556353 ATP8B2P98198 1209 aa6.79□□□□□ -1.32
PRPF39-209ENST00000556353 SCAPQ12770 1279 aa6.79□□□□□ -1.32
PRPF39-209ENST00000556353 NUP133Q8WUM0 1156 aa6.79□□□□□ -1.32
PRPF39-209ENST00000556353 SLC9A6Q92581 669 aa6.79□□□□□ -1.32
PRPF39-209ENST00000556353 Q96MF0 132 aa6.79□□□□□ -1.32
PRPF39-209ENST00000556353 GSTO2Q9H4Y5 243 aa6.79□□□□□ -1.32
PRPF39-209ENST00000556353 TBCCD1Q9NVR7 557 aa6.79□□□□□ -1.32
PRPF39-209ENST00000556353 USP25Q9UHP3 1055 aa6.79□□□□□ -1.32
PRPF39-209ENST00000556353 MAST3O60307 1309 aa6.78□□□□□ -1.32
PRPF39-209ENST00000556353 CCDC78A2IDD5 438 aa6.78□□□□□ -1.32
PRPF39-209ENST00000556353 KIAA0391O15091 583 aaKnown RBP6.78□□□□□ -1.32
PRPF39-209ENST00000556353 NDUFS2O75306 463 aa6.78□□□□□ -1.32
PRPF39-209ENST00000556353 ERN1O75460 977 aaKnown RBP6.78□□□□□ -1.32
PRPF39-209ENST00000556353 CXCR5P32302 372 aa6.78□□□□□ -1.32
PRPF39-209ENST00000556353 IARSP41252 1262 aaKnown RBP6.78□□□□□ -1.32
PRPF39-209ENST00000556353 SLC16A1P53985 500 aa6.78□□□□□ -1.32
PRPF39-209ENST00000556353 ACAP2Q15057 778 aa6.78□□□□□ -1.32
PRPF39-209ENST00000556353 INAVAQ3KP66 663 aa6.78□□□□□ -1.32
PRPF39-209ENST00000556353 DACT2Q5SW24 774 aa6.78□□□□□ -1.32
PRPF39-209ENST00000556353 RNF187Q5TA31 235 aaPredicted RBP6.78□□□□□ -1.32
PRPF39-209ENST00000556353 MIGA2Q7L4E1 593 aa6.78□□□□□ -1.32
PRPF39-209ENST00000556353 PRIMA1Q86XR5 153 aa6.78□□□□□ -1.32
PRPF39-209ENST00000556353 C1orf162Q8NEQ5 155 aaPredicted RBP6.78□□□□□ -1.32
PRPF39-209ENST00000556353 NLGN4YQ8NFZ3 816 aaPredicted RBP6.78□□□□□ -1.32
PRPF39-209ENST00000556353 FUBP1Q96AE4 644 aaKnown RBP6.78□□□□□ -1.32
PRPF39-209ENST00000556353 MARS2Q96GW9 593 aaKnown RBP6.78□□□□□ -1.32
PRPF39-209ENST00000556353 PNKPQ96T60 521 aa6.78□□□□□ -1.32
PRPF39-209ENST00000556353 C11orf54Q9H0W9 315 aaPredicted RBP6.78□□□□□ -1.32
PRPF39-209ENST00000556353 PCSK5Q92824 1860 aa6.77□□□□□ -1.33
PRPF39-209ENST00000556353 CDHR4A6H8M9 788 aa6.77□□□□□ -1.33
PRPF39-209ENST00000556353 MPLP40238 635 aa6.77□□□□□ -1.33
PRPF39-209ENST00000556353 CTXN1P60606 82 aa6.77□□□□□ -1.33
PRPF39-209ENST00000556353 CYP2A13Q16696 494 aa6.77□□□□□ -1.33
PRPF39-209ENST00000556353 PRR16Q569H4 304 aa6.77□□□□□ -1.33
PRPF39-209ENST00000556353 RSPH3Q86UC2 560 aa6.77□□□□□ -1.33
PRPF39-209ENST00000556353 ADGRG3Q86Y34 549 aa6.77□□□□□ -1.33
PRPF39-209ENST00000556353 CBARPQ8N350 705 aaPredicted RBP6.77□□□□□ -1.33
PRPF39-209ENST00000556353 TBC1D15Q8TC07 691 aa6.77□□□□□ -1.33
PRPF39-209ENST00000556353 JADE3Q92613 823 aa6.77□□□□□ -1.33
PRPF39-209ENST00000556353 HDAC10Q969S8 669 aa6.77□□□□□ -1.33
PRPF39-209ENST00000556353 CASS4Q9NQ75 786 aa6.77□□□□□ -1.33
PRPF39-209ENST00000556353 TDP1Q9NUW8 608 aa6.77□□□□□ -1.33
PRPF39-209ENST00000556353 INSL6Q9Y581 213 aa6.77□□□□□ -1.33
PRPF39-209ENST00000556353 HAUS5O94927 633 aa6.76□□□□□ -1.33
PRPF39-209ENST00000556353 MT-CO1P00395 513 aa6.76□□□□□ -1.33
PRPF39-209ENST00000556353 PLA2G5P39877 138 aa6.76□□□□□ -1.33
PRPF39-209ENST00000556353 CLK3P49761 638 aaKnown RBP6.76□□□□□ -1.33
PRPF39-209ENST00000556353 NOMO3P69849 1222 aa6.76□□□□□ -1.33
PRPF39-209ENST00000556353 NOMO2Q5JPE7 1267 aa6.76□□□□□ -1.33
PRPF39-209ENST00000556353 SYDE2Q5VT97 1194 aa6.76□□□□□ -1.33
PRPF39-209ENST00000556353 COLGALT2Q8IYK4 626 aa6.76□□□□□ -1.33
PRPF39-209ENST00000556353 NACC2Q96BF6 587 aa6.76□□□□□ -1.33
PRPF39-209ENST00000556353 FAXDC2Q96IV6 333 aa6.76□□□□□ -1.33
PRPF39-209ENST00000556353 TMX3Q96JJ7 454 aa6.76□□□□□ -1.33
PRPF39-209ENST00000556353 MED15Q96RN5 788 aa6.76□□□□□ -1.33
PRPF39-209ENST00000556353 PTGFRNQ9P2B2 879 aa6.76□□□□□ -1.33
PRPF39-209ENST00000556353 TUBD1Q9UJT1 453 aa6.76□□□□□ -1.33
PRPF39-209ENST00000556353 CUX2O14529 1486 aa6.76□□□□□ -1.33
PRPF39-209ENST00000556353 BAZ1BQ9UIG0 1483 aaKnown RBP6.76□□□□□ -1.33
PRPF39-209ENST00000556353 WIZO95785 1651 aa6.75□□□□□ -1.33
PRPF39-209ENST00000556353 KLHL33A6NCF5 533 aa6.75□□□□□ -1.33
PRPF39-209ENST00000556353 MYADML2A6NDP7 307 aa6.75□□□□□ -1.33
PRPF39-209ENST00000556353 MYBL2P10244 700 aa6.75□□□□□ -1.33
PRPF39-209ENST00000556353 VAV2P52735 878 aa6.75□□□□□ -1.33
PRPF39-209ENST00000556353 CDC42EP1Q00587 391 aa6.75□□□□□ -1.33
PRPF39-209ENST00000556353 Q6ZNX1 250 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms