RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 MARS2Q96GW9 593 aaKnown RBP5.61□□□□□ -1.51
SCFD1-217ENST00000555953 PDLIM2Q96JY6 352 aa5.61□□□□□ -1.51
SCFD1-217ENST00000555953 SEMA4GQ9NTN9 838 aa5.61□□□□□ -1.51
SCFD1-217ENST00000555953 CCM2LQ9NUG4 571 aaPredicted RBP5.61□□□□□ -1.51
SCFD1-217ENST00000555953 DNAJC28Q9NX36 388 aa5.61□□□□□ -1.51
SCFD1-217ENST00000555953 HSFX1Q9UBD0 423 aa5.61□□□□□ -1.51
SCFD1-217ENST00000555953 ZBTB21Q9ULJ3 1066 aa5.61□□□□□ -1.51
SCFD1-217ENST00000555953 RUVBL1Q9Y265 456 aaKnown RBP5.61□□□□□ -1.51
SCFD1-217ENST00000555953 FRMD4BQ9Y2L6 1034 aa5.61□□□□□ -1.51
SCFD1-217ENST00000555953 MTO1Q9Y2Z2 717 aaKnown RBP5.61□□□□□ -1.51
SCFD1-217ENST00000555953 INO80B-WBP1J3KQ70 363 aa5.6□□□□□ -1.51
SCFD1-217ENST00000555953 TEX33O43247 280 aa5.6□□□□□ -1.51
SCFD1-217ENST00000555953 GPR32O75388 356 aa5.6□□□□□ -1.51
SCFD1-217ENST00000555953 AMY1AP04745 511 aa5.6□□□□□ -1.51
SCFD1-217ENST00000555953 OSMP13725 252 aa5.6□□□□□ -1.51
SCFD1-217ENST00000555953 CACNA2D1P54289 1103 aa5.6□□□□□ -1.51
SCFD1-217ENST00000555953 NOMO3P69849 1222 aa5.6□□□□□ -1.51
SCFD1-217ENST00000555953 TMPRSS15P98073 1019 aa5.6□□□□□ -1.51
SCFD1-217ENST00000555953 MTM1Q13496 603 aa5.6□□□□□ -1.51
SCFD1-217ENST00000555953 GEN1Q17RS7 908 aa5.6□□□□□ -1.51
SCFD1-217ENST00000555953 NOMO2Q5JPE7 1267 aa5.6□□□□□ -1.51
SCFD1-217ENST00000555953 SP5Q6BEB4 398 aaPredicted RBP5.6□□□□□ -1.51
SCFD1-217ENST00000555953 LHFPL2Q6ZUX7 228 aa5.6□□□□□ -1.51
SCFD1-217ENST00000555953 NOP9Q86U38 636 aaKnown RBP5.6□□□□□ -1.51
SCFD1-217ENST00000555953 ZGPATQ8N5A5 531 aaKnown RBP5.6□□□□□ -1.51
SCFD1-217ENST00000555953 CCHCR1Q8TD31 782 aa5.6□□□□□ -1.51
SCFD1-217ENST00000555953 INO80BQ9C086 356 aaPredicted RBP5.6□□□□□ -1.51
SCFD1-217ENST00000555953 KCTD5Q9NXV2 234 aa5.6□□□□□ -1.51
SCFD1-217ENST00000555953 LRIT1Q9P2V4 623 aa5.6□□□□□ -1.51
SCFD1-217ENST00000555953 PCDHGA2Q9Y5H1 932 aa5.6□□□□□ -1.51
SCFD1-217ENST00000555953 TCRBV7S2A1N4TA0A589 114 aa5.59□□□□□ -1.51
SCFD1-217ENST00000555953 CDHR4A6H8M9 788 aa5.59□□□□□ -1.51
SCFD1-217ENST00000555953 MYADML2A6NDP7 307 aa5.59□□□□□ -1.51
SCFD1-217ENST00000555953 LRRC3CA6NJW4 275 aa5.59□□□□□ -1.51
SCFD1-217ENST00000555953 RBMXL2O75526 392 aaKnown RBP5.59□□□□□ -1.51
SCFD1-217ENST00000555953 CDK4P11802 303 aa5.59□□□□□ -1.51
SCFD1-217ENST00000555953 MTNR1BP49286 362 aa5.59□□□□□ -1.51
SCFD1-217ENST00000555953 SLC5A3P53794 718 aa5.59□□□□□ -1.51
SCFD1-217ENST00000555953 NHLH1Q02575 133 aa5.59□□□□□ -1.51
SCFD1-217ENST00000555953 SLFN5Q08AF3 891 aa5.59□□□□□ -1.51
SCFD1-217ENST00000555953 LNX2Q8N448 690 aa5.59□□□□□ -1.51
SCFD1-217ENST00000555953 CHAC2Q8WUX2 184 aa5.59□□□□□ -1.51
SCFD1-217ENST00000555953 AHCYL2Q96HN2 611 aaKnown RBP5.59□□□□□ -1.51
SCFD1-217ENST00000555953 KLK15Q9H2R5 256 aa5.59□□□□□ -1.51
SCFD1-217ENST00000555953 GSTO2Q9H4Y5 243 aa5.59□□□□□ -1.51
SCFD1-217ENST00000555953 ERN1O75460 977 aaKnown RBP5.58□□□□□ -1.52
SCFD1-217ENST00000555953 PRKD3O94806 890 aa5.58□□□□□ -1.52
SCFD1-217ENST00000555953 EYA4O95677 639 aa5.58□□□□□ -1.52
SCFD1-217ENST00000555953 ALAS1P13196 640 aa5.58□□□□□ -1.52
SCFD1-217ENST00000555953 KRTAP10-11P60412 298 aa5.58□□□□□ -1.52
SCFD1-217ENST00000555953 ATP8B2P98198 1209 aa5.58□□□□□ -1.52
SCFD1-217ENST00000555953 NPM2Q86SE8 214 aaKnown RBP5.58□□□□□ -1.52
SCFD1-217ENST00000555953 GLCCI1Q86VQ1 547 aa5.58□□□□□ -1.52
SCFD1-217ENST00000555953 FITM2Q8N6M3 262 aa5.58□□□□□ -1.52
SCFD1-217ENST00000555953 SSH3Q8TE77 659 aa5.58□□□□□ -1.52
SCFD1-217ENST00000555953 ZNF384Q8TF68 577 aa5.58□□□□□ -1.52
SCFD1-217ENST00000555953 NUP133Q8WUM0 1156 aa5.58□□□□□ -1.52
SCFD1-217ENST00000555953 CYFIP2Q96F07 1278 aa5.58□□□□□ -1.52
SCFD1-217ENST00000555953 DNM3Q9UQ16 869 aa5.58□□□□□ -1.52
SCFD1-217ENST00000555953 DMTF1Q9Y222 760 aa5.58□□□□□ -1.52
SCFD1-217ENST00000555953 FAM171A2A8MVW0 826 aa5.57□□□□□ -1.52
SCFD1-217ENST00000555953 FCER1AP12319 257 aa5.57□□□□□ -1.52
SCFD1-217ENST00000555953 MASP1P48740 699 aa5.57□□□□□ -1.52
SCFD1-217ENST00000555953 ATXN1P54253 815 aaKnown RBP5.57□□□□□ -1.52
SCFD1-217ENST00000555953 COLGALT2Q8IYK4 626 aa5.57□□□□□ -1.52
SCFD1-217ENST00000555953 Q8NA96 180 aa5.57□□□□□ -1.52
SCFD1-217ENST00000555953 PNKPQ96T60 521 aa5.57□□□□□ -1.52
SCFD1-217ENST00000555953 KIAA0391O15091 583 aaKnown RBP5.56□□□□□ -1.52
SCFD1-217ENST00000555953 DDCP20711 480 aa5.56□□□□□ -1.52
SCFD1-217ENST00000555953 FAPQ12884 760 aa5.56□□□□□ -1.52
SCFD1-217ENST00000555953 FOXF2Q12947 444 aa5.56□□□□□ -1.52
SCFD1-217ENST00000555953 CT47A1Q5JQC4 288 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-217ENST00000555953 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-217ENST00000555953 TBC1D15Q8TC07 691 aa5.56□□□□□ -1.52
SCFD1-217ENST00000555953 COG1Q8WTW3 980 aa5.56□□□□□ -1.52
SCFD1-217ENST00000555953 DPF2Q92785 391 aa5.56□□□□□ -1.52
SCFD1-217ENST00000555953 NAF1Q96HR8 494 aaKnown RBP5.56□□□□□ -1.52
SCFD1-217ENST00000555953 SLC2A13Q96QE2 648 aa5.56□□□□□ -1.52
SCFD1-217ENST00000555953 MED15Q96RN5 788 aa5.56□□□□□ -1.52
SCFD1-217ENST00000555953 SLKQ9H2G2 1235 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-217ENST00000555953 IL17RBQ9NRM6 502 aa5.56□□□□□ -1.52
SCFD1-217ENST00000555953 ASB6Q9NWX5 421 aa5.56□□□□□ -1.52
SCFD1-217ENST00000555953 SLC17A6Q9P2U8 582 aa5.56□□□□□ -1.52
SCFD1-217ENST00000555953 GPR45Q9Y5Y3 372 aa5.56□□□□□ -1.52
SCFD1-217ENST00000555953 MYBBP1AQ9BQG0 1328 aaKnown RBP5.55□□□□□ -1.52
SCFD1-217ENST00000555953 TRGV11A0A075B6L2 103 aa5.55□□□□□ -1.52
SCFD1-217ENST00000555953 GPR39O43194 453 aa5.55□□□□□ -1.52
SCFD1-217ENST00000555953 SLC6A4P31645 630 aa5.55□□□□□ -1.52
SCFD1-217ENST00000555953 ERVK-21P61565 698 aa5.55□□□□□ -1.52
SCFD1-217ENST00000555953 SF3B3Q15393 1217 aaKnown RBP5.55□□□□□ -1.52
SCFD1-217ENST00000555953 DACT2Q5SW24 774 aa5.55□□□□□ -1.52
SCFD1-217ENST00000555953 PAPD7Q5XG87 772 aaKnown RBP5.55□□□□□ -1.52
SCFD1-217ENST00000555953 DCBLD1Q8N8Z6 715 aa5.55□□□□□ -1.52
SCFD1-217ENST00000555953 MANSC1Q9H8J5 431 aa5.55□□□□□ -1.52
SCFD1-217ENST00000555953 TLDC2A0PJX2 215 aa5.54□□□□□ -1.52
SCFD1-217ENST00000555953 PEX1O43933 1283 aa5.54□□□□□ -1.52
SCFD1-217ENST00000555953 AGXTP21549 392 aa5.54□□□□□ -1.52
SCFD1-217ENST00000555953 SRRM1Q8IYB3 904 aaKnown RBP5.54□□□□□ -1.52
SCFD1-217ENST00000555953 HEPHQ9BQS7 1158 aa5.54□□□□□ -1.52
SCFD1-217ENST00000555953 TLR10Q9BXR5 811 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms