RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 OPTNQ96CV9 577 aa8.26□□□□□ -1.09
CHD8-209ENST00000555935 PTCD3Q96EY7 689 aaKnown RBP8.26□□□□□ -1.09
CHD8-209ENST00000555935 NSL1Q96IY1 281 aa8.26□□□□□ -1.09
CHD8-209ENST00000555935 C9orf72Q96LT7 481 aa8.26□□□□□ -1.09
CHD8-209ENST00000555935 PCDHB18PQ96TA0 734 aa8.26□□□□□ -1.09
CHD8-209ENST00000555935 ZWILCHQ9H900 591 aa8.26□□□□□ -1.09
CHD8-209ENST00000555935 PARVGQ9HBI0 331 aa8.26□□□□□ -1.09
CHD8-209ENST00000555935 KIAA1586Q9HCI6 787 aa8.26□□□□□ -1.09
CHD8-209ENST00000555935 LRRC4BQ9NT99 713 aa8.26□□□□□ -1.09
CHD8-209ENST00000555935 CHCHD3Q9NX63 227 aaKnown RBP8.26□□□□□ -1.09
CHD8-209ENST00000555935 NEU2Q9Y3R4 380 aa8.26□□□□□ -1.09
CHD8-209ENST00000555935 UMODL1Q5DID0 1318 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 IGKV6D-41A0A0C4DH26 115 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 FAM196BA6NMK8 535 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 ZBED4O75132 1171 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 TBX10O75333 385 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 KRT15P19012 456 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 CYP2J2P51589 502 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 ARHGAP4P98171 946 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 KRT72Q14CN4 511 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 ANKS1BQ7Z6G8 1248 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 TXNRD3Q86VQ6 643 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 VPS52Q8N1B4 723 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 EPS8L1Q8TE68 723 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 CRYGNQ8WXF5 182 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 CENPKQ9BS16 269 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 SLC24A2Q9UI40 661 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 GRID1Q9ULK0 1009 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 COMMD3-BMI1R4GMX3 469 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 TYROBPO43914 113 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 PYGLP06737 847 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 RRM1P23921 792 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 GCAP28676 217 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 NMT1P30419 496 aaKnown RBP8.25□□□□□ -1.09
CHD8-209ENST00000555935 RPA3P35244 121 aaPredicted RBP8.25□□□□□ -1.09
CHD8-209ENST00000555935 SLC1A1P43005 524 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 RANBP1P43487 201 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 CCNG2Q16589 344 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 PRR16Q569H4 304 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 RBM26Q5T8P6 1007 aaKnown RBP8.25□□□□□ -1.09
CHD8-209ENST00000555935 ZNF746Q6NUN9 644 aaPredicted RBP8.25□□□□□ -1.09
CHD8-209ENST00000555935 BRINP3Q76B58 766 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 KIAA0825Q8IV33 1275 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 FAM71AQ8IYT1 594 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 STKLD1Q8NE28 680 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 ATG4AQ8WYN0 398 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 OLFM3Q96PB7 478 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 RBM15Q96T37 977 aaKnown RBP eCLIP8.25□□□□□ -1.09
CHD8-209ENST00000555935 SPATA16Q9BXB7 569 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 ASCC2Q9H1I8 757 aaPredicted RBP8.25□□□□□ -1.09
CHD8-209ENST00000555935 NPHS2Q9NP85 383 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 ATXN10Q9UBB4 475 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 TMCO1Q9UM00 188 aa8.25□□□□□ -1.09
CHD8-209ENST00000555935 USP17L15C9J2P7 530 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 USP17L13C9JLJ4 530 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 USP17L11C9JVI0 530 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 USP17L18D6R9N7 530 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 USP17L22D6RA61 530 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 USP17L17D6RBQ6 530 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 USP17L19D6RCP7 530 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 USP17L20D6RJB6 530 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 F8W8V4 182 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 SMAPO00193 183 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 EML1O00423 815 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 NDC80O14777 642 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 ATMINO43313 823 aaPredicted RBP8.24□□□□□ -1.09
CHD8-209ENST00000555935 LYNP07948 512 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 USP17L24Q0WX57 530 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 PTP4A2Q12974 167 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 TRIP13Q15645 432 aaPredicted RBP8.24□□□□□ -1.09
CHD8-209ENST00000555935 SLC1A5Q15758 541 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 PKN2Q16513 984 aaKnown RBP8.24□□□□□ -1.09
CHD8-209ENST00000555935 RASIP1Q5U651 963 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 FAM91A1Q658Y4 838 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 CCDC62Q6P9F0 684 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 USP17L6PQ6QN14 398 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 C1orf186Q6ZWK4 172 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 ZNF720Q7Z2F6 126 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 NOP9Q86U38 636 aaKnown RBP8.24□□□□□ -1.09
CHD8-209ENST00000555935 CCNJLQ8IV13 435 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 ARHGEF19Q8IW93 802 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 KLHL23Q8NBE8 558 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 BTBD6Q96KE9 485 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 FAM81BQ96LP2 452 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 PWWP2AQ96N64 755 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 UIMC1Q96RL1 719 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 HAPLN3Q96S86 360 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 NDNQ99608 321 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 TRIM55Q9BYV6 548 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 MIS12Q9H081 205 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 DNAJB4Q9UDY4 337 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 PHF24Q9UPV7 400 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 MTO1Q9Y2Z2 717 aaKnown RBP8.24□□□□□ -1.09
CHD8-209ENST00000555935 ARFGEF1Q9Y6D6 1849 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 LOC102724428A0A0B4J2F2 783 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 A0A1B0GVG6 124 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 USP17L10C9JJH3 530 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 PIK3CDO00329 1044 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 SGPL1O95470 568 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 CETN2P41208 172 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms