RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 KIF12Q96FN5 646 aa20.06■□□□□ 0.8
NEDD1-208ENST00000555806 RPF1Q9H9Y2 349 aaKnown RBP20.06■□□□□ 0.8
NEDD1-208ENST00000555806 MTRRQ9UBK8 725 aa20.06■□□□□ 0.8
NEDD1-208ENST00000555806 TUBGCP4Q9UGJ1 667 aa20.06■□□□□ 0.8
NEDD1-208ENST00000555806 MTCL1Q9Y4B5 1905 aaKnown RBP20.06■□□□□ 0.8
NEDD1-208ENST00000555806 CLUHO75153 1309 aa20.05■□□□□ 0.8
NEDD1-208ENST00000555806 A0A087X0B3 334 aa20.05■□□□□ 0.8
NEDD1-208ENST00000555806 TMEM221A6NGB7 291 aa20.05■□□□□ 0.8
NEDD1-208ENST00000555806 M0R296 226 aa20.05■□□□□ 0.8
NEDD1-208ENST00000555806 PPP6R2O75170 966 aa20.05■□□□□ 0.8
NEDD1-208ENST00000555806 ZMYND10O75800 440 aa20.05■□□□□ 0.8
NEDD1-208ENST00000555806 F13A1P00488 732 aa20.05■□□□□ 0.8
NEDD1-208ENST00000555806 ASGR2P07307 311 aa20.05■□□□□ 0.8
NEDD1-208ENST00000555806 IDEP14735 1019 aa20.05■□□□□ 0.8
NEDD1-208ENST00000555806 GAP43P17677 238 aa20.05■□□□□ 0.8
NEDD1-208ENST00000555806 MCM4P33991 863 aa20.05■□□□□ 0.8
NEDD1-208ENST00000555806 OR1D2P34982 312 aa20.05■□□□□ 0.8
NEDD1-208ENST00000555806 SIGLEC14Q08ET2 396 aa20.05■□□□□ 0.8
NEDD1-208ENST00000555806 SLC39A4Q6P5W5 647 aa20.05■□□□□ 0.8
NEDD1-208ENST00000555806 STAMQ92783 540 aa20.05■□□□□ 0.8
NEDD1-208ENST00000555806 ZNF707Q96C28 371 aaPredicted RBP20.05■□□□□ 0.8
NEDD1-208ENST00000555806 FAM212AQ96EL1 285 aa20.05■□□□□ 0.8
NEDD1-208ENST00000555806 RHOBTB2Q9BYZ6 727 aa20.05■□□□□ 0.8
NEDD1-208ENST00000555806 PRKD2Q9BZL6 878 aa20.05■□□□□ 0.8
NEDD1-208ENST00000555806 ST6GALNAC4Q9H4F1 302 aa20.05■□□□□ 0.8
NEDD1-208ENST00000555806 MRPL44Q9H9J2 332 aaKnown RBP20.05■□□□□ 0.8
NEDD1-208ENST00000555806 WDR6Q9NNW5 1121 aaKnown RBP20.05■□□□□ 0.8
NEDD1-208ENST00000555806 SEL1LQ9UBV2 794 aa20.05■□□□□ 0.8
NEDD1-208ENST00000555806 LIMD1Q9UGP4 676 aa20.05■□□□□ 0.8
NEDD1-208ENST00000555806 SORCS3Q9UPU3 1222 aa20.05■□□□□ 0.8
NEDD1-208ENST00000555806 CDY1Q9Y6F8 540 aa20.05■□□□□ 0.8
NEDD1-208ENST00000555806 A0A0B4J269 797 aa20.04■□□□□ 0.8
NEDD1-208ENST00000555806 TTC26A0AVF1 554 aa20.04■□□□□ 0.8
NEDD1-208ENST00000555806 LACTBL1A8MY62 500 aa20.04■□□□□ 0.8
NEDD1-208ENST00000555806 YEATS4O95619 227 aa20.04■□□□□ 0.8
NEDD1-208ENST00000555806 C8AP07357 584 aa20.04■□□□□ 0.8
NEDD1-208ENST00000555806 GBP2P32456 591 aaPredicted RBP20.04■□□□□ 0.8
NEDD1-208ENST00000555806 MTMR3Q13615 1198 aa20.04■□□□□ 0.8
NEDD1-208ENST00000555806 RAB33AQ14088 237 aa20.04■□□□□ 0.8
NEDD1-208ENST00000555806 ENOX2Q16206 610 aaKnown RBP20.04■□□□□ 0.8
NEDD1-208ENST00000555806 PPM1LQ5SGD2 360 aa20.04■□□□□ 0.8
NEDD1-208ENST00000555806 ZNF720Q7Z2F6 126 aa20.04■□□□□ 0.8
NEDD1-208ENST00000555806 DNAJC19Q96DA6 116 aa20.04■□□□□ 0.8
NEDD1-208ENST00000555806 TBC1D7Q9P0N9 293 aa20.04■□□□□ 0.8
NEDD1-208ENST00000555806 UBQLN1Q9UMX0 589 aaKnown RBP20.04■□□□□ 0.8
NEDD1-208ENST00000555806 BACE2Q9Y5Z0 518 aa20.04■□□□□ 0.8
NEDD1-208ENST00000555806 TISP43B9A030 160 aa20.03■□□□□ 0.8
NEDD1-208ENST00000555806 ANKRD63C9JTQ0 380 aa20.03■□□□□ 0.8
NEDD1-208ENST00000555806 SYN3O14994 580 aa20.03■□□□□ 0.8
NEDD1-208ENST00000555806 XPOTO43592 962 aaKnown RBP20.03■□□□□ 0.8
NEDD1-208ENST00000555806 FAM189A1O60320 539 aa20.03■□□□□ 0.8
NEDD1-208ENST00000555806 VARS2Q5ST30 1063 aaKnown RBP20.03■□□□□ 0.8
NEDD1-208ENST00000555806 ADALQ6DHV7 355 aa20.03■□□□□ 0.8
NEDD1-208ENST00000555806 RSPO2Q6UXX9 243 aaPredicted RBP20.03■□□□□ 0.8
NEDD1-208ENST00000555806 HVCN1Q96D96 273 aa20.03■□□□□ 0.8
NEDD1-208ENST00000555806 MFSD14AQ96MC6 490 aa20.03■□□□□ 0.8
NEDD1-208ENST00000555806 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.03■□□□□ 0.8
NEDD1-208ENST00000555806 TECTAO75443 2155 aa20.02■□□□□ 0.8
NEDD1-208ENST00000555806 CUTAO60888 179 aa20.02■□□□□ 0.8
NEDD1-208ENST00000555806 GCNT3O95395 438 aa20.02■□□□□ 0.8
NEDD1-208ENST00000555806 SLFN12LQ6IEE8 588 aa20.02■□□□□ 0.8
NEDD1-208ENST00000555806 TMEM130Q8N3G9 435 aa20.02■□□□□ 0.8
NEDD1-208ENST00000555806 SLC7A14Q8TBB6 771 aa20.02■□□□□ 0.8
NEDD1-208ENST00000555806 PBXIP1Q96AQ6 731 aa20.02■□□□□ 0.8
NEDD1-208ENST00000555806 SUSD3Q96L08 255 aa20.02■□□□□ 0.8
NEDD1-208ENST00000555806 CPSF3Q9UKF6 684 aaKnown RBP20.02■□□□□ 0.8
NEDD1-208ENST00000555806 POLIQ9UNA4 740 aa20.02■□□□□ 0.8
NEDD1-208ENST00000555806 EXOC7Q9UPT5 735 aa20.02■□□□□ 0.8
NEDD1-208ENST00000555806 H7C4K7 107 aa20.01■□□□□ 0.79
NEDD1-208ENST00000555806 CCL16O15467 120 aa20.01■□□□□ 0.79
NEDD1-208ENST00000555806 PPP1R37O75864 691 aa20.01■□□□□ 0.79
NEDD1-208ENST00000555806 PAPLNO95428 1278 aa20.01■□□□□ 0.79
NEDD1-208ENST00000555806 HNRNPA1P09651 372 aaKnown RBP eCLIP20.01■□□□□ 0.79
NEDD1-208ENST00000555806 CYP3A5P20815 502 aa20.01■□□□□ 0.79
NEDD1-208ENST00000555806 LRPAP1P30533 357 aa20.01■□□□□ 0.79
NEDD1-208ENST00000555806 ACOT2P49753 483 aa20.01■□□□□ 0.79
NEDD1-208ENST00000555806 GUCY2FP51841 1108 aa20.01■□□□□ 0.79
NEDD1-208ENST00000555806 ARPP19P56211 112 aa20.01■□□□□ 0.79
NEDD1-208ENST00000555806 PKP1Q13835 747 aa20.01■□□□□ 0.79
NEDD1-208ENST00000555806 AXDND1Q5T1B0 1012 aaPredicted RBP20.01■□□□□ 0.79
NEDD1-208ENST00000555806 JADE1Q6IE81 842 aa20.01■□□□□ 0.79
NEDD1-208ENST00000555806 GET4Q7L5D6 327 aaPredicted RBP20.01■□□□□ 0.79
NEDD1-208ENST00000555806 CD302Q8IX05 232 aa20.01■□□□□ 0.79
NEDD1-208ENST00000555806 UBALD2Q8IYN6 164 aa20.01■□□□□ 0.79
NEDD1-208ENST00000555806 APPL2Q8NEU8 664 aa20.01■□□□□ 0.79
NEDD1-208ENST00000555806 KCNG4Q8TDN1 519 aa20.01■□□□□ 0.79
NEDD1-208ENST00000555806 POMGNT1Q8WZA1 660 aa20.01■□□□□ 0.79
NEDD1-208ENST00000555806 DHX58Q96C10 678 aa20.01■□□□□ 0.79
NEDD1-208ENST00000555806 ACCSQ96QU6 501 aa20.01■□□□□ 0.79
NEDD1-208ENST00000555806 IKZF4Q9H2S9 585 aa20.01■□□□□ 0.79
NEDD1-208ENST00000555806 PANK4Q9NVE7 773 aa20.01■□□□□ 0.79
NEDD1-208ENST00000555806 AGO2Q9UKV8 859 aaKnown RBP20.01■□□□□ 0.79
NEDD1-208ENST00000555806 XYLBO75191 536 aa20■□□□□ 0.79
NEDD1-208ENST00000555806 ZBTB6Q15916 424 aa20■□□□□ 0.79
NEDD1-208ENST00000555806 CTXN3Q4LDR2 81 aa20■□□□□ 0.79
NEDD1-208ENST00000555806 L1TD1Q5T7N2 865 aaKnown RBP20■□□□□ 0.79
NEDD1-208ENST00000555806 ZNF280DQ6N043 979 aa20■□□□□ 0.79
NEDD1-208ENST00000555806 BMP8AQ7Z5Y6 402 aa20■□□□□ 0.79
NEDD1-208ENST00000555806 GRASPQ7Z6J2 395 aaPredicted RBP20■□□□□ 0.79
NEDD1-208ENST00000555806 SUGP1Q8IWZ8 645 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms