RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 PHACTR2O75167 634 aa13.46□□□□□ -0.25
SHMT2-221ENST00000555773 ALDH2P05091 517 aa13.46□□□□□ -0.25
SHMT2-221ENST00000555773 FMO5P49326 533 aa13.46□□□□□ -0.25
SHMT2-221ENST00000555773 MXI1P50539 228 aa13.46□□□□□ -0.25
SHMT2-221ENST00000555773 FANCCQ00597 558 aa13.46□□□□□ -0.25
SHMT2-221ENST00000555773 DSC1Q08554 894 aa13.46□□□□□ -0.25
SHMT2-221ENST00000555773 BIRC3Q13489 604 aa13.46□□□□□ -0.25
SHMT2-221ENST00000555773 BTG3Q14201 252 aaPredicted RBP13.46□□□□□ -0.25
SHMT2-221ENST00000555773 MIIPQ5JXC2 388 aa13.46□□□□□ -0.25
SHMT2-221ENST00000555773 FKBP15Q5T1M5 1219 aa13.46□□□□□ -0.25
SHMT2-221ENST00000555773 LMBRD2Q68DH5 695 aaPredicted RBP13.46□□□□□ -0.25
SHMT2-221ENST00000555773 C1orf127Q8N9H9 656 aa13.46□□□□□ -0.25
SHMT2-221ENST00000555773 C18orf25Q96B23 403 aaPredicted RBP13.46□□□□□ -0.25
SHMT2-221ENST00000555773 TMEM175Q9BSA9 504 aa13.46□□□□□ -0.25
SHMT2-221ENST00000555773 MTMR12Q9C0I1 747 aa13.46□□□□□ -0.25
SHMT2-221ENST00000555773 VPS16Q9H269 839 aa13.46□□□□□ -0.25
SHMT2-221ENST00000555773 TAB2Q9NYJ8 693 aa13.46□□□□□ -0.25
SHMT2-221ENST00000555773 PLAGL2Q9UPG8 496 aa13.46□□□□□ -0.25
SHMT2-221ENST00000555773 PTPRJQ12913 1337 aa13.45□□□□□ -0.26
SHMT2-221ENST00000555773 ANO9A1A5B4 782 aa13.45□□□□□ -0.26
SHMT2-221ENST00000555773 LGALS16A8MUM7 142 aa13.45□□□□□ -0.26
SHMT2-221ENST00000555773 PES1O00541 588 aaKnown RBP13.45□□□□□ -0.26
SHMT2-221ENST00000555773 PIRO00625 290 aa13.45□□□□□ -0.26
SHMT2-221ENST00000555773 CBFA2T2O43439 604 aa13.45□□□□□ -0.26
SHMT2-221ENST00000555773 TLL1O43897 1013 aa13.45□□□□□ -0.26
SHMT2-221ENST00000555773 DDHD2O94830 711 aa13.45□□□□□ -0.26
SHMT2-221ENST00000555773 TPM3P06753 285 aa13.45□□□□□ -0.26
SHMT2-221ENST00000555773 ATICP31939 592 aa13.45□□□□□ -0.26
SHMT2-221ENST00000555773 PNPLA4P41247 253 aa13.45□□□□□ -0.26
SHMT2-221ENST00000555773 GATMP50440 423 aa13.45□□□□□ -0.26
SHMT2-221ENST00000555773 UBASH3AP57075 661 aa13.45□□□□□ -0.26
SHMT2-221ENST00000555773 TRPC3Q13507 836 aa13.45□□□□□ -0.26
SHMT2-221ENST00000555773 TDRD10Q5VZ19 366 aaKnown RBP13.45□□□□□ -0.26
SHMT2-221ENST00000555773 DCLRE1AQ6PJP8 1040 aa13.45□□□□□ -0.26
SHMT2-221ENST00000555773 SARM1Q6SZW1 724 aa13.45□□□□□ -0.26
SHMT2-221ENST00000555773 TMCO2Q7Z6W1 182 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-221ENST00000555773 ZNF280BQ86YH2 543 aa13.45□□□□□ -0.26
SHMT2-221ENST00000555773 COLGALT2Q8IYK4 626 aa13.45□□□□□ -0.26
SHMT2-221ENST00000555773 TDHQ8IZJ6 230 aa13.45□□□□□ -0.26
SHMT2-221ENST00000555773 LRRC52Q8N7C0 313 aa13.45□□□□□ -0.26
SHMT2-221ENST00000555773 FBXL13Q8NEE6 735 aa13.45□□□□□ -0.26
SHMT2-221ENST00000555773 SP7Q8TDD2 431 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-221ENST00000555773 TAF4BQ92750 862 aa13.45□□□□□ -0.26
SHMT2-221ENST00000555773 NRDE2Q9H7Z3 1164 aa13.45□□□□□ -0.26
SHMT2-221ENST00000555773 RTN4Q9NQC3 1192 aaKnown RBP13.45□□□□□ -0.26
SHMT2-221ENST00000555773 PDE4DIPQ5VU43 2346 aa13.45□□□□□ -0.26
SHMT2-221ENST00000555773 LTBP2Q14767 1821 aa13.44□□□□□ -0.26
SHMT2-221ENST00000555773 A0A1B0GTH6 734 aa13.44□□□□□ -0.26
SHMT2-221ENST00000555773 GOLGA6L3A6NEY3 463 aa13.44□□□□□ -0.26
SHMT2-221ENST00000555773 STAU1O95793 577 aaKnown RBP13.44□□□□□ -0.26
SHMT2-221ENST00000555773 CST3P01034 146 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-221ENST00000555773 ALDH7A1P49419 539 aaKnown RBP13.44□□□□□ -0.26
SHMT2-221ENST00000555773 SOX4Q06945 474 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-221ENST00000555773 NCOA4Q13772 614 aa13.44□□□□□ -0.26
SHMT2-221ENST00000555773 NR1I3Q14994 352 aa13.44□□□□□ -0.26
SHMT2-221ENST00000555773 UPP1Q16831 310 aa13.44□□□□□ -0.26
SHMT2-221ENST00000555773 SGSM1Q2NKQ1 1148 aa13.44□□□□□ -0.26
SHMT2-221ENST00000555773 CBWD6Q4V339 395 aa13.44□□□□□ -0.26
SHMT2-221ENST00000555773 CBWD3Q5JTY5 395 aa13.44□□□□□ -0.26
SHMT2-221ENST00000555773 CBWD5Q5RIA9 395 aa13.44□□□□□ -0.26
SHMT2-221ENST00000555773 C9orf57Q5W0N0 161 aa13.44□□□□□ -0.26
SHMT2-221ENST00000555773 GBP6Q6ZN66 633 aa13.44□□□□□ -0.26
SHMT2-221ENST00000555773 FIBCD1Q8N539 461 aa13.44□□□□□ -0.26
SHMT2-221ENST00000555773 CCDC150Q8NCX0 1101 aa13.44□□□□□ -0.26
SHMT2-221ENST00000555773 EHBP1Q8NDI1 1231 aa13.44□□□□□ -0.26
SHMT2-221ENST00000555773 CXorf38Q8TB03 319 aa13.44□□□□□ -0.26
SHMT2-221ENST00000555773 FAXDC2Q96IV6 333 aa13.44□□□□□ -0.26
SHMT2-221ENST00000555773 COLEC11Q9BWP8 271 aa13.44□□□□□ -0.26
SHMT2-221ENST00000555773 PRO3102Q9H379 93 aa13.44□□□□□ -0.26
SHMT2-221ENST00000555773 CWH43Q9H720 699 aa13.44□□□□□ -0.26
SHMT2-221ENST00000555773 MMRN2Q9H8L6 949 aa13.44□□□□□ -0.26
SHMT2-221ENST00000555773 AAASQ9NRG9 546 aa13.44□□□□□ -0.26
SHMT2-221ENST00000555773 RAB20Q9NX57 234 aa13.44□□□□□ -0.26
SHMT2-221ENST00000555773 TUBGCP4Q9UGJ1 667 aa13.44□□□□□ -0.26
SHMT2-221ENST00000555773 SIX4Q9UIU6 781 aa13.44□□□□□ -0.26
SHMT2-221ENST00000555773 AGAP1Q9UPQ3 857 aa13.44□□□□□ -0.26
SHMT2-221ENST00000555773 FAN1Q9Y2M0 1017 aa13.44□□□□□ -0.26
SHMT2-221ENST00000555773 PCDHA11Q9Y5I1 949 aa13.44□□□□□ -0.26
SHMT2-221ENST00000555773 A0A1W2PPC1 479 aa13.43□□□□□ -0.26
SHMT2-221ENST00000555773 FSD2A1L4K1 749 aa13.43□□□□□ -0.26
SHMT2-221ENST00000555773 TMEM189-UBE2V1I3L0A0 370 aa13.43□□□□□ -0.26
SHMT2-221ENST00000555773 PODXLO00592 558 aa13.43□□□□□ -0.26
SHMT2-221ENST00000555773 ZC3H11AO75152 810 aaKnown RBP eCLIP13.43□□□□□ -0.26
SHMT2-221ENST00000555773 VNN1O95497 513 aa13.43□□□□□ -0.26
SHMT2-221ENST00000555773 HLA-DRAP01903 254 aa13.43□□□□□ -0.26
SHMT2-221ENST00000555773 ITGB3P05106 788 aa13.43□□□□□ -0.26
SHMT2-221ENST00000555773 GALTP07902 379 aa13.43□□□□□ -0.26
SHMT2-221ENST00000555773 KRT19P08727 400 aa13.43□□□□□ -0.26
SHMT2-221ENST00000555773 LAG3P18627 525 aa13.43□□□□□ -0.26
SHMT2-221ENST00000555773 POLR2BP30876 1174 aaKnown RBP13.43□□□□□ -0.26
SHMT2-221ENST00000555773 OR1G1P47890 313 aa13.43□□□□□ -0.26
SHMT2-221ENST00000555773 MYL7Q01449 175 aa13.43□□□□□ -0.26
SHMT2-221ENST00000555773 UBXN1Q04323 297 aa13.43□□□□□ -0.26
SHMT2-221ENST00000555773 MYO1EQ12965 1108 aa13.43□□□□□ -0.26
SHMT2-221ENST00000555773 EXOC3L4Q17RC7 722 aa13.43□□□□□ -0.26
SHMT2-221ENST00000555773 PAN2Q504Q3 1202 aaKnown RBP13.43□□□□□ -0.26
SHMT2-221ENST00000555773 WDR44Q5JSH3 913 aa13.43□□□□□ -0.26
SHMT2-221ENST00000555773 TAS1R2Q8TE23 839 aa13.43□□□□□ -0.26
SHMT2-221ENST00000555773 NAP1L5Q96NT1 182 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-221ENST00000555773 IMPG2Q9BZV3 1241 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms