RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 CTDP1Q9Y5B0 961 aaPredicted RBP17.24■□□□□ 0.35
TUBB3-209ENST00000555609 SUN1O94901 812 aa17.23■□□□□ 0.35
TUBB3-209ENST00000555609 ABHD2P08910 425 aa17.23■□□□□ 0.35
TUBB3-209ENST00000555609 CCND2P30279 289 aa17.23■□□□□ 0.35
TUBB3-209ENST00000555609 NSFP46459 744 aaKnown RBP17.23■□□□□ 0.35
TUBB3-209ENST00000555609 STAT4Q14765 748 aa17.23■□□□□ 0.35
TUBB3-209ENST00000555609 PSMD6Q15008 389 aa17.23■□□□□ 0.35
TUBB3-209ENST00000555609 SLC39A4Q6P5W5 647 aa17.23■□□□□ 0.35
TUBB3-209ENST00000555609 ANO5Q75V66 913 aa17.23■□□□□ 0.35
TUBB3-209ENST00000555609 CCDC25Q86WR0 208 aa17.23■□□□□ 0.35
TUBB3-209ENST00000555609 RHOT1Q8IXI2 618 aa17.23■□□□□ 0.35
TUBB3-209ENST00000555609 KATNAL2Q8IYT4 538 aa17.23■□□□□ 0.35
TUBB3-209ENST00000555609 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.23■□□□□ 0.35
TUBB3-209ENST00000555609 DYDC1Q8WWB3 177 aa17.23■□□□□ 0.35
TUBB3-209ENST00000555609 C1orf54Q8WWF1 131 aa17.23■□□□□ 0.35
TUBB3-209ENST00000555609 ZBED3Q96IU2 234 aaPredicted RBP17.23■□□□□ 0.35
TUBB3-209ENST00000555609 IFT74Q96LB3 600 aa17.23■□□□□ 0.35
TUBB3-209ENST00000555609 SCLT1Q96NL6 688 aa17.23■□□□□ 0.35
TUBB3-209ENST00000555609 RMDN3Q96TC7 470 aa17.23■□□□□ 0.35
TUBB3-209ENST00000555609 TMEM39BQ9GZU3 492 aa17.23■□□□□ 0.35
TUBB3-209ENST00000555609 PDLIM7Q9NR12 457 aa17.23■□□□□ 0.35
TUBB3-209ENST00000555609 PPP1R1BQ9UD71 204 aaPredicted RBP17.23■□□□□ 0.35
TUBB3-209ENST00000555609 BCS1LQ9Y276 419 aa17.23■□□□□ 0.35
TUBB3-209ENST00000555609 NEU2Q9Y3R4 380 aa17.23■□□□□ 0.35
TUBB3-209ENST00000555609 MROH7Q68CQ1 1323 aa17.23■□□□□ 0.35
TUBB3-209ENST00000555609 MYPNQ86TC9 1320 aa17.23■□□□□ 0.35
TUBB3-209ENST00000555609 EIF2AK2P19525 551 aaKnown RBP17.22■□□□□ 0.35
TUBB3-209ENST00000555609 SLCO1A2P46721 670 aa17.22■□□□□ 0.35
TUBB3-209ENST00000555609 NR1H3Q13133 447 aa17.22■□□□□ 0.35
TUBB3-209ENST00000555609 SPRED3Q2MJR0 410 aa17.22■□□□□ 0.35
TUBB3-209ENST00000555609 ARHGEF16Q5VV41 709 aa17.22■□□□□ 0.35
TUBB3-209ENST00000555609 NSMFQ6X4W1 530 aa17.22■□□□□ 0.35
TUBB3-209ENST00000555609 CKAP2Q8WWK9 683 aa17.22■□□□□ 0.35
TUBB3-209ENST00000555609 GRAMD1AQ96CP6 724 aa17.22■□□□□ 0.35
TUBB3-209ENST00000555609 CEP170P1Q96L14 293 aa17.22■□□□□ 0.35
TUBB3-209ENST00000555609 ACP6Q9NPH0 428 aa17.22■□□□□ 0.35
TUBB3-209ENST00000555609 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.22■□□□□ 0.353e-7■■■□□ 15.4
TUBB3-209ENST00000555609 SCINQ9Y6U3 715 aa17.22■□□□□ 0.35
TUBB3-209ENST00000555609 ATP9AO75110 1047 aa17.22■□□□□ 0.35
TUBB3-209ENST00000555609 MYCLP12524 364 aaPredicted RBP17.22■□□□□ 0.35
TUBB3-209ENST00000555609 ITGA8P53708 1063 aa17.22■□□□□ 0.35
TUBB3-209ENST00000555609 KLF1Q13351 362 aaPredicted RBP17.22■□□□□ 0.35
TUBB3-209ENST00000555609 PLA2G4FQ68DD2 849 aa17.22■□□□□ 0.35
TUBB3-209ENST00000555609 ARHGEF18Q6ZSZ5 1173 aa17.22■□□□□ 0.35
TUBB3-209ENST00000555609 CCDC63Q8NA47 563 aa17.22■□□□□ 0.35
TUBB3-209ENST00000555609 EXD1Q8NHP7 514 aa17.22■□□□□ 0.35
TUBB3-209ENST00000555609 CDHR1Q96JP9 859 aa17.22■□□□□ 0.35
TUBB3-209ENST00000555609 POP1Q99575 1024 aaKnown RBP17.22■□□□□ 0.35
TUBB3-209ENST00000555609 CCDC113Q9H0I3 377 aa17.22■□□□□ 0.35
TUBB3-209ENST00000555609 RAVER2Q9HCJ3 691 aaKnown RBP17.22■□□□□ 0.35
TUBB3-209ENST00000555609 CHST7Q9NS84 486 aa17.22■□□□□ 0.35
TUBB3-209ENST00000555609 STYXL1Q9Y6J8 313 aa17.22■□□□□ 0.35
TUBB3-209ENST00000555609 NFASCO94856 1347 aa17.22■□□□□ 0.35
TUBB3-209ENST00000555609 A0A1B0GUA9 196 aa17.21■□□□□ 0.35
TUBB3-209ENST00000555609 TMEM120BA0PK00 339 aa17.21■□□□□ 0.35
TUBB3-209ENST00000555609 THAP12O43422 761 aa17.21■□□□□ 0.35
TUBB3-209ENST00000555609 CDH16O75309 829 aa17.21■□□□□ 0.35
TUBB3-209ENST00000555609 PSAPP07602 524 aa17.21■□□□□ 0.35
TUBB3-209ENST00000555609 ADCY8P40145 1251 aa17.21■□□□□ 0.35
TUBB3-209ENST00000555609 ZACNQ401N2 412 aa17.21■□□□□ 0.35
TUBB3-209ENST00000555609 CRELD2Q6UXH1 353 aaPredicted RBP17.21■□□□□ 0.35
TUBB3-209ENST00000555609 PPP1R21Q6ZMI0 780 aa17.21■□□□□ 0.35
TUBB3-209ENST00000555609 ZNF365Q70YC5 407 aa17.21■□□□□ 0.35
TUBB3-209ENST00000555609 MON1BQ7L1V2 547 aa17.21■□□□□ 0.35
TUBB3-209ENST00000555609 VSIG10LQ86VR7 867 aa17.21■□□□□ 0.35
TUBB3-209ENST00000555609 PHF13Q86YI8 300 aaPredicted RBP17.21■□□□□ 0.35
TUBB3-209ENST00000555609 CPNE8Q86YQ8 564 aa17.21■□□□□ 0.35
TUBB3-209ENST00000555609 CPXCR1Q8N123 301 aa17.21■□□□□ 0.35
TUBB3-209ENST00000555609 MYCBPQ99417 103 aaPredicted RBP17.21■□□□□ 0.35
TUBB3-209ENST00000555609 DDX23Q9BUQ8 820 aaKnown RBP17.21■□□□□ 0.35
TUBB3-209ENST00000555609 ARHGAP28Q9P2N2 729 aa17.21■□□□□ 0.35
TUBB3-209ENST00000555609 HNRNPDLO14979 420 aaKnown RBP17.2■□□□□ 0.34
TUBB3-209ENST00000555609 STAM2O75886 525 aa17.2■□□□□ 0.34
TUBB3-209ENST00000555609 STBD1O95210 358 aa17.2■□□□□ 0.34
TUBB3-209ENST00000555609 RRM1P23921 792 aa17.2■□□□□ 0.34
TUBB3-209ENST00000555609 ELF3P78545 371 aaPredicted RBP17.2■□□□□ 0.34
TUBB3-209ENST00000555609 LONRF1Q17RB8 773 aa17.2■□□□□ 0.34
TUBB3-209ENST00000555609 KCTD19Q17RG1 926 aaPredicted RBP17.2■□□□□ 0.34
TUBB3-209ENST00000555609 DRICH1Q6PGQ1 229 aaPredicted RBP17.2■□□□□ 0.34
TUBB3-209ENST00000555609 VSTM1Q6UX27 236 aa17.2■□□□□ 0.34
TUBB3-209ENST00000555609 UHMK1Q8TAS1 419 aaKnown RBP17.2■□□□□ 0.34
TUBB3-209ENST00000555609 PPCSQ9HAB8 311 aa17.2■□□□□ 0.34
TUBB3-209ENST00000555609 TOPORSQ9NS56 1045 aaPredicted RBP17.2■□□□□ 0.34
TUBB3-209ENST00000555609 TPX2Q9ULW0 747 aaKnown RBP17.2■□□□□ 0.34
TUBB3-209ENST00000555609 CNTN6Q9UQ52 1028 aa17.2■□□□□ 0.34
TUBB3-209ENST00000555609 ADGRA3Q8IWK6 1321 aa17.2■□□□□ 0.34
TUBB3-209ENST00000555609 TMEM150BA6NC51 233 aa17.2■□□□□ 0.34
TUBB3-209ENST00000555609 RAD17O75943 681 aa17.2■□□□□ 0.34
TUBB3-209ENST00000555609 ACSL3O95573 720 aa17.2■□□□□ 0.34
TUBB3-209ENST00000555609 LDHAP00338 332 aaKnown RBP17.2■□□□□ 0.34
TUBB3-209ENST00000555609 C4BPAP04003 597 aaKnown RBP17.2■□□□□ 0.34
TUBB3-209ENST00000555609 TBXAS1P24557 533 aaPredicted RBP17.2■□□□□ 0.34
TUBB3-209ENST00000555609 CHKAP35790 457 aa17.2■□□□□ 0.34
TUBB3-209ENST00000555609 MAP2K2P36507 400 aa17.2■□□□□ 0.34
TUBB3-209ENST00000555609 C1QBPQ07021 282 aaKnown RBP17.2■□□□□ 0.34
TUBB3-209ENST00000555609 SNX1Q13596 522 aa17.2■□□□□ 0.34
TUBB3-209ENST00000555609 NEDD9Q14511 834 aa17.2■□□□□ 0.34
TUBB3-209ENST00000555609 GALNTL6Q49A17 601 aa17.2■□□□□ 0.34
TUBB3-209ENST00000555609 SLFN12LQ6IEE8 588 aa17.2■□□□□ 0.34
TUBB3-209ENST00000555609 ANKRD35Q8N283 1001 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms