RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 ZEB2O60315 1214 aa5.16□□□□□ -1.58
SNX6-204ENST00000555541 GPANK1O95872 356 aa5.16□□□□□ -1.58
SNX6-204ENST00000555541 CKBP12277 381 aa5.16□□□□□ -1.58
SNX6-204ENST00000555541 IL2RBP14784 551 aa5.16□□□□□ -1.58
SNX6-204ENST00000555541 ATP5JP18859 108 aa5.16□□□□□ -1.58
SNX6-204ENST00000555541 POU3F3P20264 500 aaPredicted RBP5.16□□□□□ -1.58
SNX6-204ENST00000555541 PCSK1P29120 753 aa5.16□□□□□ -1.58
SNX6-204ENST00000555541 ECHS1P30084 290 aa5.16□□□□□ -1.58
SNX6-204ENST00000555541 RGS19P49795 217 aa5.16□□□□□ -1.58
SNX6-204ENST00000555541 LCE1EQ5T753 118 aa5.16□□□□□ -1.58
SNX6-204ENST00000555541 AUTS2Q8WXX7 1259 aa5.16□□□□□ -1.58
SNX6-204ENST00000555541 MARS2Q96GW9 593 aaKnown RBP5.16□□□□□ -1.58
SNX6-204ENST00000555541 SLC29A3Q9BZD2 475 aa5.16□□□□□ -1.58
SNX6-204ENST00000555541 IFT22Q9H7X7 185 aa5.16□□□□□ -1.58
SNX6-204ENST00000555541 IFT122Q9HBG6 1241 aa5.16□□□□□ -1.58
SNX6-204ENST00000555541 KIAA1586Q9HCI6 787 aa5.16□□□□□ -1.58
SNX6-204ENST00000555541 CASS4Q9NQ75 786 aa5.16□□□□□ -1.58
SNX6-204ENST00000555541 VSX1Q9NZR4 365 aaPredicted RBP5.16□□□□□ -1.58
SNX6-204ENST00000555541 ARPP21Q9UBL0 812 aaPredicted RBP5.16□□□□□ -1.58
SNX6-204ENST00000555541 ULK1O75385 1050 aa5.15□□□□□ -1.59
SNX6-204ENST00000555541 ONECUT2O95948 504 aa5.15□□□□□ -1.59
SNX6-204ENST00000555541 RAP2AP10114 183 aa5.15□□□□□ -1.59
SNX6-204ENST00000555541 MYCLP1P12525 358 aaPredicted RBP5.15□□□□□ -1.59
SNX6-204ENST00000555541 MCAMP43121 646 aa5.15□□□□□ -1.59
SNX6-204ENST00000555541 NOMO3P69849 1222 aa5.15□□□□□ -1.59
SNX6-204ENST00000555541 MRPS35P82673 323 aaKnown RBP5.15□□□□□ -1.59
SNX6-204ENST00000555541 SLFN5Q08AF3 891 aa5.15□□□□□ -1.59
SNX6-204ENST00000555541 NOMO1Q15155 1222 aa5.15□□□□□ -1.59
SNX6-204ENST00000555541 NOMO2Q5JPE7 1267 aa5.15□□□□□ -1.59
SNX6-204ENST00000555541 ZNF529Q6P280 563 aa5.15□□□□□ -1.59
SNX6-204ENST00000555541 THNSL2Q86YJ6 484 aa5.15□□□□□ -1.59
SNX6-204ENST00000555541 ACTRT2Q8TDY3 377 aa5.15□□□□□ -1.59
SNX6-204ENST00000555541 TGFBRAP1Q8WUH2 860 aa5.15□□□□□ -1.59
SNX6-204ENST00000555541 CASKIN2Q8WXE0 1202 aa5.15□□□□□ -1.59
SNX6-204ENST00000555541 PTCD3Q96EY7 689 aaKnown RBP5.15□□□□□ -1.59
SNX6-204ENST00000555541 MOCS1Q9NZB8 636 aa5.15□□□□□ -1.59
SNX6-204ENST00000555541 SLC17A6Q9P2U8 582 aa5.15□□□□□ -1.59
SNX6-204ENST00000555541 ZNF70Q9UC06 446 aaPredicted RBP5.15□□□□□ -1.59
SNX6-204ENST00000555541 ACTL7AQ9Y615 435 aa5.15□□□□□ -1.59
SNX6-204ENST00000555541 IKBKBO14920 756 aa5.14□□□□□ -1.59
SNX6-204ENST00000555541 ERN1O75460 977 aaKnown RBP5.14□□□□□ -1.59
SNX6-204ENST00000555541 AMY1AP04745 511 aa5.14□□□□□ -1.59
SNX6-204ENST00000555541 ANO4Q32M45 955 aa5.14□□□□□ -1.59
SNX6-204ENST00000555541 OR2I1PQ8NGU4 316 aa5.14□□□□□ -1.59
SNX6-204ENST00000555541 USP7Q93009 1102 aa5.14□□□□□ -1.59
SNX6-204ENST00000555541 REXO4Q9GZR2 422 aaKnown RBP5.14□□□□□ -1.59
SNX6-204ENST00000555541 QRSL1Q9H0R6 528 aaKnown RBP5.14□□□□□ -1.59
SNX6-204ENST00000555541 KMT5AQ9NQR1 393 aa5.14□□□□□ -1.59
SNX6-204ENST00000555541 IL17RBQ9NRM6 502 aa5.14□□□□□ -1.59
SNX6-204ENST00000555541 LRIT1Q9P2V4 623 aa5.14□□□□□ -1.59
SNX6-204ENST00000555541 AJAP1Q9UKB5 411 aaPredicted RBP5.14□□□□□ -1.59
SNX6-204ENST00000555541 ELFN1P0C7U0 828 aa5.13□□□□□ -1.59
SNX6-204ENST00000555541 ATP8B2P98198 1209 aa5.13□□□□□ -1.59
SNX6-204ENST00000555541 MTM1Q13496 603 aa5.13□□□□□ -1.59
SNX6-204ENST00000555541 GEN1Q17RS7 908 aa5.13□□□□□ -1.59
SNX6-204ENST00000555541 MUM1L1Q5H9M0 696 aa5.13□□□□□ -1.59
SNX6-204ENST00000555541 ZNF788Q6ZQV5 615 aa5.13□□□□□ -1.59
SNX6-204ENST00000555541 UBE3BQ7Z3V4 1068 aa5.13□□□□□ -1.59
SNX6-204ENST00000555541 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.13□□□□□ -1.59
SNX6-204ENST00000555541 SSH3Q8TE77 659 aa5.13□□□□□ -1.59
SNX6-204ENST00000555541 TIMP4Q99727 224 aa5.13□□□□□ -1.59
SNX6-204ENST00000555541 LANCL2Q9NS86 450 aa5.13□□□□□ -1.59
SNX6-204ENST00000555541 KAT6AQ92794 2004 aa5.13□□□□□ -1.59
SNX6-204ENST00000555541 GOLGA8AA7E2F4 631 aa5.12□□□□□ -1.59
SNX6-204ENST00000555541 FOLR3P41439 243 aa5.12□□□□□ -1.59
SNX6-204ENST00000555541 GPR3P46089 330 aa5.12□□□□□ -1.59
SNX6-204ENST00000555541 TOR2AQ5JU69 321 aa5.12□□□□□ -1.59
SNX6-204ENST00000555541 GJC2Q5T442 439 aaPredicted RBP5.12□□□□□ -1.59
SNX6-204ENST00000555541 ZGPATQ8N5A5 531 aaKnown RBP5.12□□□□□ -1.59
SNX6-204ENST00000555541 NUP133Q8WUM0 1156 aa5.12□□□□□ -1.59
SNX6-204ENST00000555541 UHRF1Q96T88 793 aaPredicted RBP5.12□□□□□ -1.59
SNX6-204ENST00000555541 TTC1Q99614 292 aa5.12□□□□□ -1.59
SNX6-204ENST00000555541 ACE2Q9BYF1 805 aaPredicted RBP5.12□□□□□ -1.59
SNX6-204ENST00000555541 SENP6Q9GZR1 1112 aaPredicted RBP5.12□□□□□ -1.59
SNX6-204ENST00000555541 GSTO2Q9H4Y5 243 aa5.12□□□□□ -1.59
SNX6-204ENST00000555541 ASB6Q9NWX5 421 aa5.12□□□□□ -1.59
SNX6-204ENST00000555541 ENPP3O14638 875 aa5.11□□□□□ -1.59
SNX6-204ENST00000555541 GSPT1P15170 499 aaKnown RBP5.11□□□□□ -1.59
SNX6-204ENST00000555541 PER3P56645 1201 aa5.11□□□□□ -1.59
SNX6-204ENST00000555541 MGAT2Q10469 447 aa5.11□□□□□ -1.59
SNX6-204ENST00000555541 MALLQ13021 153 aa5.11□□□□□ -1.59
SNX6-204ENST00000555541 SF3B3Q15393 1217 aaKnown RBP5.11□□□□□ -1.59
SNX6-204ENST00000555541 VWA1Q6PCB0 445 aa5.11□□□□□ -1.59
SNX6-204ENST00000555541 DDX46Q7L014 1031 aaKnown RBP5.11□□□□□ -1.59
SNX6-204ENST00000555541 DPF1Q92782 380 aa5.11□□□□□ -1.59
SNX6-204ENST00000555541 UROC1Q96N76 676 aa5.11□□□□□ -1.59
SNX6-204ENST00000555541 FCER1AP12319 257 aa5.1□□□□□ -1.59
SNX6-204ENST00000555541 MTHFD2P13995 350 aa5.1□□□□□ -1.59
SNX6-204ENST00000555541 HOXB6P17509 224 aaKnown RBP5.1□□□□□ -1.59
SNX6-204ENST00000555541 WT1P19544 449 aaPredicted RBP5.1□□□□□ -1.59
SNX6-204ENST00000555541 SLC6A4P31645 630 aa5.1□□□□□ -1.59
SNX6-204ENST00000555541 MTNR1BP49286 362 aa5.1□□□□□ -1.59
SNX6-204ENST00000555541 GYS2P54840 703 aa5.1□□□□□ -1.59
SNX6-204ENST00000555541 SRSF2Q01130 221 aaKnown RBP5.1□□□□□ -1.59
SNX6-204ENST00000555541 SRSF4Q08170 494 aaKnown RBP5.1□□□□□ -1.59
SNX6-204ENST00000555541 STRN3Q13033 797 aa5.1□□□□□ -1.59
SNX6-204ENST00000555541 FOXR2Q6PJQ5 311 aa5.1□□□□□ -1.59
SNX6-204ENST00000555541 FAM180AQ6UWF9 173 aa5.1□□□□□ -1.59
SNX6-204ENST00000555541 NPM2Q86SE8 214 aaKnown RBP5.1□□□□□ -1.59
SNX6-204ENST00000555541 MED15Q96RN5 788 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms