RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 NRP1O14786 923 aa15.44■□□□□ 0.06
CHD8-208ENST00000555301 B4GALT3O60512 393 aa15.44■□□□□ 0.06
CHD8-208ENST00000555301 RB1P06400 928 aa15.44■□□□□ 0.06
CHD8-208ENST00000555301 LINC00271P0C7V0 271 aa15.44■□□□□ 0.06
CHD8-208ENST00000555301 GTF2H1P32780 548 aa15.44■□□□□ 0.06
CHD8-208ENST00000555301 CTNNB1P35222 781 aa15.44■□□□□ 0.06
CHD8-208ENST00000555301 BMPR1AP36894 532 aa15.44■□□□□ 0.06
CHD8-208ENST00000555301 SLC11A1P49279 550 aa15.44■□□□□ 0.06
CHD8-208ENST00000555301 ERVK-21P61565 698 aa15.44■□□□□ 0.06
CHD8-208ENST00000555301 SOX4Q06945 474 aaPredicted RBP15.44■□□□□ 0.06
CHD8-208ENST00000555301 UPP1Q16831 310 aa15.44■□□□□ 0.06
CHD8-208ENST00000555301 TCERG1LQ5VWI1 586 aa15.44■□□□□ 0.06
CHD8-208ENST00000555301 LMBRD2Q68DH5 695 aaPredicted RBP15.44■□□□□ 0.06
CHD8-208ENST00000555301 DCLRE1AQ6PJP8 1040 aa15.44■□□□□ 0.06
CHD8-208ENST00000555301 AOPEPQ8N6M6 819 aa15.44■□□□□ 0.06
CHD8-208ENST00000555301 POP1Q99575 1024 aaKnown RBP15.44■□□□□ 0.06
CHD8-208ENST00000555301 MTMR12Q9C0I1 747 aa15.44■□□□□ 0.06
CHD8-208ENST00000555301 TSPY26PQ9H489 355 aa15.44■□□□□ 0.06
CHD8-208ENST00000555301 GOLGA2P5Q9HBQ8 144 aa15.44■□□□□ 0.06
CHD8-208ENST00000555301 DPP3Q9NY33 737 aa15.44■□□□□ 0.06
CHD8-208ENST00000555301 PTPRJQ12913 1337 aa15.43■□□□□ 0.06
CHD8-208ENST00000555301 C5orf67F2Z3F1 127 aa15.43■□□□□ 0.06
CHD8-208ENST00000555301 PODXLO00592 558 aa15.43■□□□□ 0.06
CHD8-208ENST00000555301 ARHGEF15O94989 841 aa15.43■□□□□ 0.06
CHD8-208ENST00000555301 PAX3P23760 479 aa15.43■□□□□ 0.06
CHD8-208ENST00000555301 EEF1GP26641 437 aaKnown RBP15.43■□□□□ 0.06
CHD8-208ENST00000555301 CLCNKBP51801 687 aa15.43■□□□□ 0.06
CHD8-208ENST00000555301 DLG4P78352 724 aa15.43■□□□□ 0.06
CHD8-208ENST00000555301 DCAF17Q5H9S7 520 aaPredicted RBP15.43■□□□□ 0.06
CHD8-208ENST00000555301 TRAPPC11Q7Z392 1133 aa15.43■□□□□ 0.06
CHD8-208ENST00000555301 IRF2BP1Q8IU81 584 aa15.43■□□□□ 0.06
CHD8-208ENST00000555301 CREBRFQ8IUR6 639 aa15.43■□□□□ 0.06
CHD8-208ENST00000555301 TRIM59Q8IWR1 403 aa15.43■□□□□ 0.06
CHD8-208ENST00000555301 SLC39A11Q8N1S5 342 aa15.43■□□□□ 0.06
CHD8-208ENST00000555301 C1orf127Q8N9H9 656 aa15.43■□□□□ 0.06
CHD8-208ENST00000555301 OR5B17Q8NGF7 314 aa15.43■□□□□ 0.06
CHD8-208ENST00000555301 FAM200AQ8TCP9 573 aa15.43■□□□□ 0.06
CHD8-208ENST00000555301 C17orf80Q9BSJ5 609 aa15.43■□□□□ 0.06
CHD8-208ENST00000555301 SAMSN1Q9NSI8 373 aaKnown RBP15.43■□□□□ 0.06
CHD8-208ENST00000555301 SPG21Q9NZD8 308 aa15.43■□□□□ 0.06
CHD8-208ENST00000555301 STK39Q9UEW8 545 aa15.43■□□□□ 0.06
CHD8-208ENST00000555301 PRG3Q9Y2Y8 225 aaPredicted RBP15.43■□□□□ 0.06
CHD8-208ENST00000555301 TMEM189-UBE2V1I3L0A0 370 aa15.42■□□□□ 0.06
CHD8-208ENST00000555301 TADA2AO75478 443 aa15.42■□□□□ 0.06
CHD8-208ENST00000555301 B3GAT3O94766 335 aa15.42■□□□□ 0.06
CHD8-208ENST00000555301 C4BPAP04003 597 aaKnown RBP15.42■□□□□ 0.06
CHD8-208ENST00000555301 ITGB3P05106 788 aa15.42■□□□□ 0.06
CHD8-208ENST00000555301 TRIM49P0CI25 452 aa15.42■□□□□ 0.06
CHD8-208ENST00000555301 TRIM49CP0CI26 452 aa15.42■□□□□ 0.06
CHD8-208ENST00000555301 PBX3P40426 434 aa15.42■□□□□ 0.06
CHD8-208ENST00000555301 PNPLA4P41247 253 aa15.42■□□□□ 0.06
CHD8-208ENST00000555301 MTIF2P46199 727 aaKnown RBP15.42■□□□□ 0.06
CHD8-208ENST00000555301 GUCY2FP51841 1108 aa15.42■□□□□ 0.06
CHD8-208ENST00000555301 TPM4P67936 248 aa15.42■□□□□ 0.06
CHD8-208ENST00000555301 RBP5P82980 135 aa15.42■□□□□ 0.06
CHD8-208ENST00000555301 PLCB3Q01970 1234 aa15.42■□□□□ 0.06
CHD8-208ENST00000555301 KRT17Q04695 432 aa15.42■□□□□ 0.06
CHD8-208ENST00000555301 BIRC3Q13489 604 aa15.42■□□□□ 0.06
CHD8-208ENST00000555301 NCAPHQ15003 741 aa15.42■□□□□ 0.06
CHD8-208ENST00000555301 EPC2Q52LR7 807 aa15.42■□□□□ 0.06
CHD8-208ENST00000555301 C1orf220Q5T0J3 134 aa15.42■□□□□ 0.06
CHD8-208ENST00000555301 CDKAL1Q5VV42 579 aa15.42■□□□□ 0.06
CHD8-208ENST00000555301 C9orf57Q5W0N0 161 aa15.42■□□□□ 0.06
CHD8-208ENST00000555301 KRT39Q6A163 491 aa15.42■□□□□ 0.06
CHD8-208ENST00000555301 DHX40Q8IX18 779 aaKnown RBP15.42■□□□□ 0.06
CHD8-208ENST00000555301 ANKRD20A12PQ8NF67 263 aa15.42■□□□□ 0.06
CHD8-208ENST00000555301 ZNF516Q92618 1163 aa15.42■□□□□ 0.06
CHD8-208ENST00000555301 SLC35C1Q96A29 364 aa15.42■□□□□ 0.06
CHD8-208ENST00000555301 TMEM169Q96HH4 297 aa15.42■□□□□ 0.06
CHD8-208ENST00000555301 IGSF21Q96ID5 467 aa15.42■□□□□ 0.06
CHD8-208ENST00000555301 ZNF560Q96MR9 790 aa15.42■□□□□ 0.06
CHD8-208ENST00000555301 PAAF1Q9BRP4 392 aa15.42■□□□□ 0.06
CHD8-208ENST00000555301 C11orf84Q9BUA3 381 aaPredicted RBP15.42■□□□□ 0.06
CHD8-208ENST00000555301 CBX8Q9HC52 389 aa15.42■□□□□ 0.06
CHD8-208ENST00000555301 TMEM8AQ9HCN3 771 aa15.42■□□□□ 0.06
CHD8-208ENST00000555301 FANCLQ9NW38 375 aa15.42■□□□□ 0.06
CHD8-208ENST00000555301 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.42■□□□□ 0.06
CHD8-208ENST00000555301 PTPRSQ13332 1948 aa15.41■□□□□ 0.06
CHD8-208ENST00000555301 ANO9A1A5B4 782 aa15.41■□□□□ 0.06
CHD8-208ENST00000555301 KCNJ18B7U540 433 aa15.41■□□□□ 0.06
CHD8-208ENST00000555301 NT5C1B-RDH14C9J2C7 533 aa15.41■□□□□ 0.06
CHD8-208ENST00000555301 PIRO00625 290 aa15.41■□□□□ 0.06
CHD8-208ENST00000555301 PHACTR2O75167 634 aa15.41■□□□□ 0.06
CHD8-208ENST00000555301 KRT19P08727 400 aa15.41■□□□□ 0.06
CHD8-208ENST00000555301 GCLMP48507 274 aa15.41■□□□□ 0.06
CHD8-208ENST00000555301 PPP3CAQ08209 521 aa15.41■□□□□ 0.06
CHD8-208ENST00000555301 TRPC3Q13507 836 aa15.41■□□□□ 0.06
CHD8-208ENST00000555301 KCNJ12Q14500 433 aa15.41■□□□□ 0.06
CHD8-208ENST00000555301 IQCB1Q15051 598 aa15.41■□□□□ 0.06
CHD8-208ENST00000555301 ZACNQ401N2 412 aa15.41■□□□□ 0.06
CHD8-208ENST00000555301 TCP11X2Q5H9J9 407 aa15.41■□□□□ 0.06
CHD8-208ENST00000555301 HABP4Q5JVS0 413 aaKnown RBP15.41■□□□□ 0.06
CHD8-208ENST00000555301 SV2AQ7L0J3 742 aa15.41■□□□□ 0.06
CHD8-208ENST00000555301 LRRC52Q8N7C0 313 aa15.41■□□□□ 0.06
CHD8-208ENST00000555301 FBXO22Q8NEZ5 403 aa15.41■□□□□ 0.06
CHD8-208ENST00000555301 MARCH5Q9NX47 278 aa15.41■□□□□ 0.06
CHD8-208ENST00000555301 CACNG4Q9UBN1 327 aa15.41■□□□□ 0.06
CHD8-208ENST00000555301 PUF60Q9UHX1 559 aaKnown RBP15.41■□□□□ 0.06
CHD8-208ENST00000555301 ADAM28Q9UKQ2 775 aa15.41■□□□□ 0.06
CHD8-208ENST00000555301 MTUS1Q9ULD2 1270 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms