RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 CWH43Q9H720 699 aa17.77■□□□□ 0.43
SPTLC2-203ENST00000554901 TMEM8AQ9HCN3 771 aa17.77■□□□□ 0.43
SPTLC2-203ENST00000554901 DPP3Q9NY33 737 aa17.77■□□□□ 0.43
SPTLC2-203ENST00000554901 PTPRJQ12913 1337 aa17.76■□□□□ 0.43
SPTLC2-203ENST00000554901 PDCD11Q14690 1871 aaKnown RBP17.76■□□□□ 0.43
SPTLC2-203ENST00000554901 P4HA2O15460 535 aa17.76■□□□□ 0.43
SPTLC2-203ENST00000554901 C4BPAP04003 597 aaKnown RBP17.76■□□□□ 0.43
SPTLC2-203ENST00000554901 ALDH2P05091 517 aa17.76■□□□□ 0.43
SPTLC2-203ENST00000554901 TPM2P07951 284 aa17.76■□□□□ 0.43
SPTLC2-203ENST00000554901 CDK11BP21127 795 aaKnown RBP17.76■□□□□ 0.43
SPTLC2-203ENST00000554901 ALDH7A1P49419 539 aaKnown RBP17.76■□□□□ 0.43
SPTLC2-203ENST00000554901 SOX4Q06945 474 aaPredicted RBP17.76■□□□□ 0.43
SPTLC2-203ENST00000554901 ZACNQ401N2 412 aa17.76■□□□□ 0.43
SPTLC2-203ENST00000554901 KRT39Q6A163 491 aa17.76■□□□□ 0.43
SPTLC2-203ENST00000554901 C15orf39Q6ZRI6 1047 aa17.76■□□□□ 0.43
SPTLC2-203ENST00000554901 TRAPPC11Q7Z392 1133 aa17.76■□□□□ 0.43
SPTLC2-203ENST00000554901 OR5B17Q8NGF7 314 aa17.76■□□□□ 0.43
SPTLC2-203ENST00000554901 ZNF516Q92618 1163 aa17.76■□□□□ 0.43
SPTLC2-203ENST00000554901 C18orf25Q96B23 403 aaPredicted RBP17.76■□□□□ 0.43
SPTLC2-203ENST00000554901 SAMD11Q96NU1 681 aa17.76■□□□□ 0.43
SPTLC2-203ENST00000554901 TUBGCP2Q9BSJ2 902 aa17.76■□□□□ 0.43
SPTLC2-203ENST00000554901 PBX4Q9BYU1 374 aa17.76■□□□□ 0.43
SPTLC2-203ENST00000554901 TUBGCP4Q9UGJ1 667 aa17.76■□□□□ 0.43
SPTLC2-203ENST00000554901 LIMA1Q9UHB6 759 aaKnown RBP17.76■□□□□ 0.43
SPTLC2-203ENST00000554901 MRPL42Q9Y6G3 142 aaKnown RBP17.76■□□□□ 0.43
SPTLC2-203ENST00000554901 TDRD15B5MCY1 1934 aaKnown RBP17.75■□□□□ 0.43
SPTLC2-203ENST00000554901 TRIP11Q15643 1979 aa17.75■□□□□ 0.43
SPTLC2-203ENST00000554901 ANO9A1A5B4 782 aa17.75■□□□□ 0.43
SPTLC2-203ENST00000554901 GRXCR1A8MXD5 290 aa17.75■□□□□ 0.43
SPTLC2-203ENST00000554901 TMEM189-UBE2V1I3L0A0 370 aa17.75■□□□□ 0.43
SPTLC2-203ENST00000554901 ZC3H11AO75152 810 aaKnown RBP eCLIP17.75■□□□□ 0.43
SPTLC2-203ENST00000554901 AFPP02771 609 aaKnown RBP17.75■□□□□ 0.43
SPTLC2-203ENST00000554901 TRIM49P0CI25 452 aa17.75■□□□□ 0.43
SPTLC2-203ENST00000554901 TRIM49CP0CI26 452 aa17.75■□□□□ 0.43
SPTLC2-203ENST00000554901 PPM1AP35813 382 aa17.75■□□□□ 0.43
SPTLC2-203ENST00000554901 PNPLA4P41247 253 aa17.75■□□□□ 0.43
SPTLC2-203ENST00000554901 RABGGTBP53611 331 aa17.75■□□□□ 0.43
SPTLC2-203ENST00000554901 UPP1Q16831 310 aa17.75■□□□□ 0.43
SPTLC2-203ENST00000554901 DCLRE1AQ6PJP8 1040 aa17.75■□□□□ 0.43
SPTLC2-203ENST00000554901 SV2AQ7L0J3 742 aa17.75■□□□□ 0.43
SPTLC2-203ENST00000554901 CREBRFQ8IUR6 639 aa17.75■□□□□ 0.43
SPTLC2-203ENST00000554901 LRRC52Q8N7C0 313 aa17.75■□□□□ 0.43
SPTLC2-203ENST00000554901 C1orf127Q8N9H9 656 aa17.75■□□□□ 0.43
SPTLC2-203ENST00000554901 ZNF558Q96NG5 402 aa17.75■□□□□ 0.43
SPTLC2-203ENST00000554901 COLQQ9Y215 455 aaPredicted RBP17.75■□□□□ 0.43
SPTLC2-203ENST00000554901 R3HCC1Q9Y3T6 440 aaKnown RBP17.75■□□□□ 0.43
SPTLC2-203ENST00000554901 TULP1O00294 542 aaPredicted RBP17.74■□□□□ 0.43
SPTLC2-203ENST00000554901 PIRO00625 290 aa17.74■□□□□ 0.43
SPTLC2-203ENST00000554901 GALTP07902 379 aa17.74■□□□□ 0.43
SPTLC2-203ENST00000554901 MXI1P50539 228 aa17.74■□□□□ 0.43
SPTLC2-203ENST00000554901 RBP5P82980 135 aa17.74■□□□□ 0.43
SPTLC2-203ENST00000554901 PPP3CAQ08209 521 aa17.74■□□□□ 0.43
SPTLC2-203ENST00000554901 CETN1Q12798 172 aa17.74■□□□□ 0.43
SPTLC2-203ENST00000554901 KCNH2Q12809 1159 aa17.74■□□□□ 0.43
SPTLC2-203ENST00000554901 SPOUT1Q5T280 376 aaKnown RBP17.74■□□□□ 0.43
SPTLC2-203ENST00000554901 LMBRD2Q68DH5 695 aaPredicted RBP17.74■□□□□ 0.43
SPTLC2-203ENST00000554901 KCNT2Q6UVM3 1135 aa17.74■□□□□ 0.43
SPTLC2-203ENST00000554901 COLEC11Q9BWP8 271 aa17.74■□□□□ 0.43
SPTLC2-203ENST00000554901 PLVAPQ9BX97 442 aa17.74■□□□□ 0.43
SPTLC2-203ENST00000554901 DNAJB4Q9UDY4 337 aa17.74■□□□□ 0.43
SPTLC2-203ENST00000554901 STK39Q9UEW8 545 aa17.74■□□□□ 0.43
SPTLC2-203ENST00000554901 FAN1Q9Y2M0 1017 aa17.74■□□□□ 0.43
SPTLC2-203ENST00000554901 COQ4Q9Y3A0 265 aa17.74■□□□□ 0.43
SPTLC2-203ENST00000554901 PCDHB12Q9Y5F1 795 aa17.74■□□□□ 0.43
SPTLC2-203ENST00000554901 LCHNA4D1U4 455 aa17.73■□□□□ 0.43
SPTLC2-203ENST00000554901 LINC01553A4QN01 128 aa17.73■□□□□ 0.43
SPTLC2-203ENST00000554901 CASTOR2A6NHX0 329 aa17.73■□□□□ 0.43
SPTLC2-203ENST00000554901 PODXLO00592 558 aa17.73■□□□□ 0.43
SPTLC2-203ENST00000554901 B4GALT3O60512 393 aa17.73■□□□□ 0.43
SPTLC2-203ENST00000554901 PHACTR2O75167 634 aa17.73■□□□□ 0.43
SPTLC2-203ENST00000554901 ITGB3P05106 788 aa17.73■□□□□ 0.43
SPTLC2-203ENST00000554901 LINC00271P0C7V0 271 aa17.73■□□□□ 0.43
SPTLC2-203ENST00000554901 ATICP31939 592 aa17.73■□□□□ 0.43
SPTLC2-203ENST00000554901 GCLMP48507 274 aa17.73■□□□□ 0.43
SPTLC2-203ENST00000554901 FMO5P49326 533 aa17.73■□□□□ 0.43
SPTLC2-203ENST00000554901 BCAR1P56945 870 aa17.73■□□□□ 0.43
SPTLC2-203ENST00000554901 BIRC3Q13489 604 aa17.73■□□□□ 0.43
SPTLC2-203ENST00000554901 KRT31Q15323 416 aa17.73■□□□□ 0.43
SPTLC2-203ENST00000554901 VWA3BQ502W6 1294 aa17.73■□□□□ 0.43
SPTLC2-203ENST00000554901 HSP90AA4PQ58FG1 418 aa17.73■□□□□ 0.43
SPTLC2-203ENST00000554901 TDRD10Q5VZ19 366 aaKnown RBP17.73■□□□□ 0.43
SPTLC2-203ENST00000554901 C9orf57Q5W0N0 161 aa17.73■□□□□ 0.43
SPTLC2-203ENST00000554901 COLGALT1Q8NBJ5 622 aa17.73■□□□□ 0.43
SPTLC2-203ENST00000554901 CXorf38Q8TB03 319 aa17.73■□□□□ 0.43
SPTLC2-203ENST00000554901 ZNF560Q96MR9 790 aa17.73■□□□□ 0.43
SPTLC2-203ENST00000554901 NDST4Q9H3R1 872 aa17.73■□□□□ 0.43
SPTLC2-203ENST00000554901 GOLGA2P5Q9HBQ8 144 aa17.73■□□□□ 0.43
SPTLC2-203ENST00000554901 GTPBP10A4D1E9 387 aaKnown RBP17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 NRP1O14786 923 aa17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 STAU1O95793 577 aaKnown RBP17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 RB1P06400 928 aa17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 CA3P07451 260 aa17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 OR1G1P47890 313 aa17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 SLC11A1P49279 550 aa17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 CLCNKBP51801 687 aa17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 TRPC3Q13507 836 aa17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 FBXL13Q8NEE6 735 aa17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 TAF4BQ92750 862 aa17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 SIX4Q9UIU6 781 aa17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 YBX2Q9Y2T7 364 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms