RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 RSPH1Q8WYR4 309 aa16.62■□□□□ 0.25
SYNE3-203ENST00000554873 NAP1L4Q99733 375 aaKnown RBP16.62■□□□□ 0.25
SYNE3-203ENST00000554873 REEP2Q9BRK0 252 aa16.62■□□□□ 0.25
SYNE3-203ENST00000554873 BCAS3Q9H6U6 928 aa16.62■□□□□ 0.25
SYNE3-203ENST00000554873 ZFP69BQ9UJL9 534 aa16.62■□□□□ 0.25
SYNE3-203ENST00000554873 ANGPTL2Q9UKU9 493 aa16.62■□□□□ 0.25
SYNE3-203ENST00000554873 KRT13P13646 458 aa16.61■□□□□ 0.25
SYNE3-203ENST00000554873 CD97P48960 835 aa16.61■□□□□ 0.25
SYNE3-203ENST00000554873 CASP4P49662 377 aa16.61■□□□□ 0.25
SYNE3-203ENST00000554873 ITGA9Q13797 1035 aa16.61■□□□□ 0.25
SYNE3-203ENST00000554873 KBTBD12Q3ZCT8 623 aa16.61■□□□□ 0.25
SYNE3-203ENST00000554873 GPATCH4Q5T3I0 446 aaKnown RBP16.61■□□□□ 0.25
SYNE3-203ENST00000554873 DCAF12L1Q5VU92 463 aa16.61■□□□□ 0.25
SYNE3-203ENST00000554873 MAP7D3Q8IWC1 876 aa16.61■□□□□ 0.25
SYNE3-203ENST00000554873 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.61■□□□□ 0.25
SYNE3-203ENST00000554873 MAML3Q96JK9 1138 aa16.61■□□□□ 0.25
SYNE3-203ENST00000554873 OXCT2Q9BYC2 517 aaPredicted RBP16.61■□□□□ 0.25
SYNE3-203ENST00000554873 BRD8Q9H0E9 1235 aa16.61■□□□□ 0.25
SYNE3-203ENST00000554873 CYP3A7-CYP3A51PA0A087WV96 503 aa16.61■□□□□ 0.25
SYNE3-203ENST00000554873 PHF2O75151 1096 aa16.61■□□□□ 0.25
SYNE3-203ENST00000554873 CYP3A7P24462 503 aa16.61■□□□□ 0.25
SYNE3-203ENST00000554873 CHRNA3P32297 505 aa16.61■□□□□ 0.25
SYNE3-203ENST00000554873 JAM2P57087 298 aa16.61■□□□□ 0.25
SYNE3-203ENST00000554873 SPIRE1Q08AE8 756 aa16.61■□□□□ 0.25
SYNE3-203ENST00000554873 SLC44A4Q53GD3 710 aa16.61■□□□□ 0.25
SYNE3-203ENST00000554873 SLC45A4Q5BKX6 768 aa16.61■□□□□ 0.25
SYNE3-203ENST00000554873 TCERG1LQ5VWI1 586 aa16.61■□□□□ 0.25
SYNE3-203ENST00000554873 BTBD10Q9BSF8 475 aa16.61■□□□□ 0.25
SYNE3-203ENST00000554873 ANO3Q9BYT9 981 aa16.61■□□□□ 0.25
SYNE3-203ENST00000554873 EPB41L1Q9H4G0 881 aa16.61■□□□□ 0.25
SYNE3-203ENST00000554873 POLLQ9UGP5 575 aa16.61■□□□□ 0.25
SYNE3-203ENST00000554873 PDXKO00764 312 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 SPATA31C1P0DKV0 1188 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 SLURP2P0DP57 97 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 ANXA13P27216 316 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 IZUMO2Q6UXV1 221 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 C10orf82Q8WW14 230 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 RPGRQ92834 1020 aaKnown RBP16.6■□□□□ 0.25
SYNE3-203ENST00000554873 ART4Q93070 314 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 UNC45AQ9H3U1 944 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 SERPINB13Q9UIV8 391 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 CCNL1Q9UK58 526 aaPredicted RBP16.6■□□□□ 0.25
SYNE3-203ENST00000554873 ADGRA3Q8IWK6 1321 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 KDM4FA0A1W2PPD8 638 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 GSC2O15499 205 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 SLC26A4O43511 780 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 ZWINTO95229 277 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 SHMT1P34896 483 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 OXCT1P55809 520 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 QRICH1Q2TAL8 776 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 CCDC25Q86WR0 208 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 SCUBE1Q8IWY4 988 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 SYT2Q8N9I0 419 aaPredicted RBP16.6■□□□□ 0.25
SYNE3-203ENST00000554873 U2AF1L4Q8WU68 220 aaKnown RBP16.6■□□□□ 0.25
SYNE3-203ENST00000554873 SLC35C1Q96A29 364 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 NMD3Q96D46 503 aaKnown RBP16.6■□□□□ 0.25
SYNE3-203ENST00000554873 C18orf8Q96DM3 657 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 MBOAT7Q96N66 472 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 ECSITQ9BQ95 431 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 CDC42EP4Q9H3Q1 356 aaKnown RBP16.6■□□□□ 0.25
SYNE3-203ENST00000554873 PCYOX1Q9UHG3 505 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 DNM3Q9UQ16 869 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 PCDHA3Q9Y5H8 950 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 PCDHA1Q9Y5I3 950 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 FOXO6A8MYZ6 492 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 RSPH10B2B2RC85 870 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 CALUO43852 315 aaPredicted RBP16.6■□□□□ 0.25
SYNE3-203ENST00000554873 ASMTLO95671 621 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 RSPH10BP0C881 870 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 DNAJC3Q13217 504 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 CCDC125Q86Z20 511 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 SLFN12Q8IYM2 578 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 SNRNP27Q8WVK2 155 aaKnown RBP16.6■□□□□ 0.25
SYNE3-203ENST00000554873 C7orf43Q8WVR3 580 aa16.6■□□□□ 0.25
SYNE3-203ENST00000554873 P2RX7Q99572 595 aaKnown RBP16.6■□□□□ 0.25
SYNE3-203ENST00000554873 CLIC2O15247 247 aa16.59■□□□□ 0.25
SYNE3-203ENST00000554873 EXOC3O60645 756 aa16.59■□□□□ 0.25
SYNE3-203ENST00000554873 ACSL3O95573 720 aa16.59■□□□□ 0.25
SYNE3-203ENST00000554873 NR3C1P04150 777 aa16.59■□□□□ 0.25
SYNE3-203ENST00000554873 BCRP11274 1271 aa16.59■□□□□ 0.25
SYNE3-203ENST00000554873 FUT4P22083 530 aa16.59■□□□□ 0.25
SYNE3-203ENST00000554873 VARSP26640 1264 aaKnown RBP16.59■□□□□ 0.25
SYNE3-203ENST00000554873 GALCP54803 685 aa16.59■□□□□ 0.25
SYNE3-203ENST00000554873 GTF2IP78347 998 aa16.59■□□□□ 0.25
SYNE3-203ENST00000554873 KCNA1Q09470 495 aa16.59■□□□□ 0.25
SYNE3-203ENST00000554873 CYLC2Q14093 348 aaPredicted RBP16.59■□□□□ 0.25
SYNE3-203ENST00000554873 PRR16Q569H4 304 aa16.59■□□□□ 0.25
SYNE3-203ENST00000554873 VPS36Q86VN1 386 aa16.59■□□□□ 0.25
SYNE3-203ENST00000554873 ETNPPLQ8TBG4 499 aa16.59■□□□□ 0.25
SYNE3-203ENST00000554873 AGAP3Q96P47 875 aa16.59■□□□□ 0.25
SYNE3-203ENST00000554873 LBHD1Q9BQE6 289 aaPredicted RBP16.59■□□□□ 0.25
SYNE3-203ENST00000554873 ACTL7BQ9Y614 415 aa16.59■□□□□ 0.25
SYNE3-203ENST00000554873 WASF2Q9Y6W5 498 aa16.59■□□□□ 0.25
SYNE3-203ENST00000554873 A8MXQ7 604 aa16.59■□□□□ 0.25
SYNE3-203ENST00000554873 HSPA6P17066 643 aa16.59■□□□□ 0.25
SYNE3-203ENST00000554873 MLH1P40692 756 aa16.59■□□□□ 0.25
SYNE3-203ENST00000554873 PSMD7P51665 324 aa16.59■□□□□ 0.25
SYNE3-203ENST00000554873 MAP3K10Q02779 954 aa16.59■□□□□ 0.25
SYNE3-203ENST00000554873 RGS9BPQ6ZS82 235 aa16.59■□□□□ 0.25
SYNE3-203ENST00000554873 DGCR14Q96DF8 476 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms