RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 PPTC7Q8NI37 304 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 ERMNQ8TAM6 284 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 CXorf38Q8TB03 319 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 SCFD2Q8WU76 684 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 TMEM40Q8WWA1 233 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 SEPT1Q8WYJ6 367 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 SEMA4DQ92854 862 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 CDK5RAP3Q96JB5 506 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 SEC16BQ96JE7 1060 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 CEP170P1Q96L14 293 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 RNPC3Q96LT9 517 aaKnown RBP6.41□□□□□ -1.38
ATXN3-230ENST00000554673 FBXL18Q96ME1 805 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 PYM1Q9BRP8 204 aaKnown RBP6.41□□□□□ -1.38
ATXN3-230ENST00000554673 RAB34Q9BZG1 259 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 TRIM5Q9C035 493 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 ADAMTS10Q9H324 1103 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 THAP9Q9H5L6 903 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 IFT122Q9HBG6 1241 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 AGPAT5Q9NUQ2 364 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 SLC5A4Q9NY91 659 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 ZHX1Q9UKY1 873 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-230ENST00000554673 ODF2LQ9ULJ1 636 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 COL4A3BPQ9Y5P4 624 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 NLRC5Q86WI3 1866 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 VWA8A3KMH1 1905 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 TTC26A0AVF1 554 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 MBLAC1A4D2B0 266 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-230ENST00000554673 ASB14A6NK59 587 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 PDXKO00764 312 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 CDK2AP1O14519 115 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 EIF3DO15371 548 aaKnown RBP eCLIP6.4□□□□□ -1.38
ATXN3-230ENST00000554673 CPNE3O75131 537 aaKnown RBP6.4□□□□□ -1.38
ATXN3-230ENST00000554673 CLSTN1O94985 981 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 GCNT3O95395 438 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 PARNO95453 639 aaKnown RBP6.4□□□□□ -1.38
ATXN3-230ENST00000554673 CAVIN2O95810 425 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 GH1P01241 217 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 IL2RAP01589 272 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 PIGRP01833 764 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 TRIM49P0CI25 452 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 TRIM49CP0CI26 452 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 SLC9A1P19634 815 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 FGFR4P22455 802 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 PROZP22891 400 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 MSX1P28360 303 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 TNFSF9P41273 254 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 UBASH3AP57075 661 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 MBTD1Q05BQ5 628 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 NOGQ13253 232 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 NFIL3Q16649 462 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 TRIM71Q2Q1W2 868 aaKnown RBP6.4□□□□□ -1.38
ATXN3-230ENST00000554673 CT47A1Q5JQC4 288 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-230ENST00000554673 ODR4Q5SWX8 454 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 LCE3BQ5TA77 95 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 SH3PXD2AQ5TCZ1 1133 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 CDCA2Q69YH5 1023 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-230ENST00000554673 MIS18BP1Q6P0N0 1132 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 PLPPR4Q7Z2D5 763 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 DNAAF5Q86Y56 855 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 CCDC65Q8IXS2 484 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 KIAA0319LQ8IZA0 1049 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 MYCT1Q8N699 235 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 CSGALNACT2Q8N6G5 542 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 KLHDC9Q8NEP7 349 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 KIAA1524Q8TCG1 905 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 ZDHHC1Q8WTX9 485 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 ZNF296Q8WUU4 475 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-230ENST00000554673 TMEM174Q8WUU8 243 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 LMBR1Q8WVP7 490 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 PRPF31Q8WWY3 499 aaKnown RBP6.4□□□□□ -1.38
ATXN3-230ENST00000554673 KAT5Q92993 513 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 SAAL1Q96ER3 474 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 PPP1R16BQ96T49 567 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 CHP1Q99653 195 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 SYT11Q9BT88 431 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 TARS2Q9BW92 718 aaKnown RBP6.4□□□□□ -1.38
ATXN3-230ENST00000554673 ABHD16BQ9H3Z7 469 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 ZHX3Q9H4I2 956 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 PCIF1Q9H4Z3 704 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 PARVGQ9HBI0 331 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 ZFYVE28Q9HCC9 887 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 PTPRHQ9HD43 1115 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 PCDH12Q9NPG4 1184 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 SETD4Q9NVD3 440 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 RMND1Q9NWS8 449 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 TBX20Q9UMR3 447 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 NENFQ9UMX5 172 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 SAMM50Q9Y512 469 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 HRH3Q9Y5N1 445 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 STYXL1Q9Y6J8 313 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 LTBP2Q14767 1821 aa6.4□□□□□ -1.38
ATXN3-230ENST00000554673 CNTNAP2Q9UHC6 1331 aa6.4□□□□□ -1.39
ATXN3-230ENST00000554673 TDRD15B5MCY1 1934 aaKnown RBP6.4□□□□□ -1.39
ATXN3-230ENST00000554673 ATG2AQ2TAZ0 1938 aa6.4□□□□□ -1.39
ATXN3-230ENST00000554673 FNDC1Q4ZHG4 1894 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-230ENST00000554673 PTPRDP23468 1912 aa6.39□□□□□ -1.39
ATXN3-230ENST00000554673 MICAL3Q7RTP6 2002 aa6.39□□□□□ -1.39
ATXN3-230ENST00000554673 DENND3A2RUS2 1198 aa6.39□□□□□ -1.39
ATXN3-230ENST00000554673 K7ENM7 598 aa6.39□□□□□ -1.39
ATXN3-230ENST00000554673 DYNC1LI2O43237 492 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms