RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 SMIM28A0A1B0GU29 152 aa11.59□□□□□ -0.55
SHMT2-215ENST00000554656 B3GAT3O94766 335 aa11.59□□□□□ -0.55
SHMT2-215ENST00000554656 DCNP07585 359 aaKnown RBP11.59□□□□□ -0.55
SHMT2-215ENST00000554656 POU2F2P09086 479 aa11.59□□□□□ -0.55
SHMT2-215ENST00000554656 GLULP15104 373 aa11.59□□□□□ -0.55
SHMT2-215ENST00000554656 PROZP22891 400 aa11.59□□□□□ -0.55
SHMT2-215ENST00000554656 DNM1Q05193 864 aaKnown RBP11.59□□□□□ -0.55
SHMT2-215ENST00000554656 PDIA5Q14554 519 aa11.59□□□□□ -0.55
SHMT2-215ENST00000554656 ZNF568Q3ZCX4 644 aa11.59□□□□□ -0.55
SHMT2-215ENST00000554656 LIN9Q5TKA1 542 aa11.59□□□□□ -0.55
SHMT2-215ENST00000554656 C1orf186Q6ZWK4 172 aa11.59□□□□□ -0.55
SHMT2-215ENST00000554656 FGF13Q92913 245 aa11.59□□□□□ -0.55
SHMT2-215ENST00000554656 SNX27Q96L92 541 aa11.59□□□□□ -0.55
SHMT2-215ENST00000554656 TARS2Q9BW92 718 aaKnown RBP11.59□□□□□ -0.55
SHMT2-215ENST00000554656 FOXQ1Q9C009 403 aa11.59□□□□□ -0.55
SHMT2-215ENST00000554656 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.59□□□□□ -0.55
SHMT2-215ENST00000554656 DNMT3BQ9UBC3 853 aaKnown RBP11.59□□□□□ -0.55
SHMT2-215ENST00000554656 NOL7Q9UMY1 257 aaKnown RBP11.59□□□□□ -0.55
SHMT2-215ENST00000554656 CDY1Q9Y6F8 540 aa11.59□□□□□ -0.55
SHMT2-215ENST00000554656 TSC2P49815 1807 aa11.58□□□□□ -0.56
SHMT2-215ENST00000554656 CCDC169A6NNP5 214 aa11.58□□□□□ -0.56
SHMT2-215ENST00000554656 K7ERI5 159 aa11.58□□□□□ -0.56
SHMT2-215ENST00000554656 NRG2O14511 850 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-215ENST00000554656 TBC1D4O60343 1298 aa11.58□□□□□ -0.56
SHMT2-215ENST00000554656 LRRN2O75325 713 aa11.58□□□□□ -0.56
SHMT2-215ENST00000554656 OSTNP61366 133 aa11.58□□□□□ -0.56
SHMT2-215ENST00000554656 GPC5P78333 572 aa11.58□□□□□ -0.56
SHMT2-215ENST00000554656 GNL2Q13823 731 aaKnown RBP11.58□□□□□ -0.56
SHMT2-215ENST00000554656 SLC5A9Q2M3M2 681 aa11.58□□□□□ -0.56
SHMT2-215ENST00000554656 PHLDB3Q6NSJ2 640 aa11.58□□□□□ -0.56
SHMT2-215ENST00000554656 RINT1Q6NUQ1 792 aa11.58□□□□□ -0.56
SHMT2-215ENST00000554656 PDXDC1Q6P996 788 aa11.58□□□□□ -0.56
SHMT2-215ENST00000554656 DCLRE1AQ6PJP8 1040 aa11.58□□□□□ -0.56
SHMT2-215ENST00000554656 NPAS3Q8IXF0 933 aa11.58□□□□□ -0.56
SHMT2-215ENST00000554656 ING5Q8WYH8 240 aa11.58□□□□□ -0.56
SHMT2-215ENST00000554656 NKD2Q969F2 451 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-215ENST00000554656 C18orf25Q96B23 403 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-215ENST00000554656 ZBTB45Q96K62 511 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-215ENST00000554656 UROC1Q96N76 676 aa11.58□□□□□ -0.56
SHMT2-215ENST00000554656 PNMA5Q96PV4 448 aa11.58□□□□□ -0.56
SHMT2-215ENST00000554656 TMEM134Q9H6X4 195 aa11.58□□□□□ -0.56
SHMT2-215ENST00000554656 POLIQ9UNA4 740 aa11.58□□□□□ -0.56
SHMT2-215ENST00000554656 BACE2Q9Y5Z0 518 aa11.58□□□□□ -0.56
SHMT2-215ENST00000554656 ZFP37Q9Y6Q3 630 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-215ENST00000554656 TICRRQ7Z2Z1 1910 aa11.57□□□□□ -0.56
SHMT2-215ENST00000554656 WDR27A2RRH5 827 aa11.57□□□□□ -0.56
SHMT2-215ENST00000554656 SFI1A8K8P3 1242 aa11.57□□□□□ -0.56
SHMT2-215ENST00000554656 STK25O00506 426 aa11.57□□□□□ -0.56
SHMT2-215ENST00000554656 SLC16A4O15374 487 aa11.57□□□□□ -0.56
SHMT2-215ENST00000554656 XYLBO75191 536 aa11.57□□□□□ -0.56
SHMT2-215ENST00000554656 PRPF40AO75400 957 aaKnown RBP11.57□□□□□ -0.56
SHMT2-215ENST00000554656 PRPHP41219 470 aa11.57□□□□□ -0.56
SHMT2-215ENST00000554656 UBE2HP62256 183 aa11.57□□□□□ -0.56
SHMT2-215ENST00000554656 ROR1Q01973 937 aa11.57□□□□□ -0.56
SHMT2-215ENST00000554656 SPECC1Q5M775 1068 aa11.57□□□□□ -0.56
SHMT2-215ENST00000554656 MPZL3Q6UWV2 235 aa11.57□□□□□ -0.56
SHMT2-215ENST00000554656 PJA1Q8NG27 643 aa11.57□□□□□ -0.56
SHMT2-215ENST00000554656 LRRC15Q8TF66 581 aa11.57□□□□□ -0.56
SHMT2-215ENST00000554656 KXD1Q9BQD3 176 aa11.57□□□□□ -0.56
SHMT2-215ENST00000554656 CCDC94Q9BW85 323 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-215ENST00000554656 MRPL4Q9BYD3 311 aaKnown RBP11.57□□□□□ -0.56
SHMT2-215ENST00000554656 KMT5AQ9NQR1 393 aa11.57□□□□□ -0.56
SHMT2-215ENST00000554656 CNTN3Q9P232 1028 aa11.57□□□□□ -0.56
SHMT2-215ENST00000554656 RCOR1Q9UKL0 485 aa11.57□□□□□ -0.56
SHMT2-215ENST00000554656 DNM3Q9UQ16 869 aa11.57□□□□□ -0.56
SHMT2-215ENST00000554656 MORC2Q9Y6X9 1032 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-215ENST00000554656 GPR179Q6PRD1 2367 aa11.57□□□□□ -0.56
SHMT2-215ENST00000554656 CACNA1AO00555 2505 aa11.56□□□□□ -0.56
SHMT2-215ENST00000554656 PODXLO00592 558 aa11.56□□□□□ -0.56
SHMT2-215ENST00000554656 YEATS4O95619 227 aa11.56□□□□□ -0.56
SHMT2-215ENST00000554656 RHOP08100 348 aa11.56□□□□□ -0.56
SHMT2-215ENST00000554656 MCF2P10911 925 aa11.56□□□□□ -0.56
SHMT2-215ENST00000554656 HARSP12081 509 aaKnown RBP11.56□□□□□ -0.56
SHMT2-215ENST00000554656 KCNE1P15382 129 aa11.56□□□□□ -0.56
SHMT2-215ENST00000554656 CEBPBP17676 345 aa11.56□□□□□ -0.56
SHMT2-215ENST00000554656 GUCY2CP25092 1073 aa11.56□□□□□ -0.56
SHMT2-215ENST00000554656 STARD6P59095 220 aa11.56□□□□□ -0.56
SHMT2-215ENST00000554656 RAD51AP2Q09MP3 1159 aa11.56□□□□□ -0.56
SHMT2-215ENST00000554656 DMP1Q13316 513 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-215ENST00000554656 UVSSAQ2YD98 709 aa11.56□□□□□ -0.56
SHMT2-215ENST00000554656 PABPC1LQ4VXU2 614 aaKnown RBP11.56□□□□□ -0.56
SHMT2-215ENST00000554656 SEZ6Q53EL9 994 aa11.56□□□□□ -0.56
SHMT2-215ENST00000554656 VARS2Q5ST30 1063 aaKnown RBP11.56□□□□□ -0.56
SHMT2-215ENST00000554656 HYIQ5T013 277 aa11.56□□□□□ -0.56
SHMT2-215ENST00000554656 KRT79Q5XKE5 535 aa11.56□□□□□ -0.56
SHMT2-215ENST00000554656 SLC8B1Q6J4K2 584 aa11.56□□□□□ -0.56
SHMT2-215ENST00000554656 ANKS3Q6ZW76 656 aa11.56□□□□□ -0.56
SHMT2-215ENST00000554656 MAML2Q8IZL2 1156 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-215ENST00000554656 ADSSL1Q8N142 457 aa11.56□□□□□ -0.56
SHMT2-215ENST00000554656 TMEM161BQ8NDZ6 487 aa11.56□□□□□ -0.56
SHMT2-215ENST00000554656 LEO1Q8WVC0 666 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-215ENST00000554656 SPATA32Q96LK8 384 aa11.56□□□□□ -0.56
SHMT2-215ENST00000554656 DRC1Q96MC2 740 aa11.56□□□□□ -0.56
SHMT2-215ENST00000554656 DDX23Q9BUQ8 820 aaKnown RBP11.56□□□□□ -0.56
SHMT2-215ENST00000554656 PLA2G2FQ9BZM2 168 aa11.56□□□□□ -0.56
SHMT2-215ENST00000554656 HAPLN2Q9GZV7 340 aa11.56□□□□□ -0.56
SHMT2-215ENST00000554656 TOPORSQ9NS56 1045 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-215ENST00000554656 SIT1Q9Y3P8 196 aa11.56□□□□□ -0.56
SHMT2-215ENST00000554656 MTF2Q9Y483 593 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-215ENST00000554656 R4GN57 208 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms