RNA–Protein interactions for RNA: ENST00000554444.5

TUBB3-206, Transcript of tubulin beta 3 class III, humanhuman

TSL 2 BASIC

Gene TUBB3, Length 1,978 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-206ENST00000554444 GPS2Q13227 327 aa17.03■□□□□ 0.32
TUBB3-206ENST00000554444 BIRC3Q13489 604 aa17.03■□□□□ 0.32
TUBB3-206ENST00000554444 SMC1AQ14683 1233 aaKnown RBP17.03■□□□□ 0.32
TUBB3-206ENST00000554444 DUOXA2Q1HG44 320 aa17.03■□□□□ 0.32
TUBB3-206ENST00000554444 DEFB115Q30KQ5 88 aa17.03■□□□□ 0.32
TUBB3-206ENST00000554444 SCARA3Q6AZY7 606 aa17.03■□□□□ 0.32
TUBB3-206ENST00000554444 DNAAF5Q86Y56 855 aa17.03■□□□□ 0.32
TUBB3-206ENST00000554444 SLC20A1Q8WUM9 679 aa17.03■□□□□ 0.32
TUBB3-206ENST00000554444 APOBEC3GQ9HC16 384 aaKnown RBP17.03■□□□□ 0.32
TUBB3-206ENST00000554444 TSPAN1O60635 241 aa17.02■□□□□ 0.32
TUBB3-206ENST00000554444 CHRNB2P17787 502 aa17.02■□□□□ 0.32
TUBB3-206ENST00000554444 PIK3CAP42336 1068 aa17.02■□□□□ 0.32
TUBB3-206ENST00000554444 GJA9P57773 515 aa17.02■□□□□ 0.32
TUBB3-206ENST00000554444 NCOA4Q13772 614 aa17.02■□□□□ 0.32
TUBB3-206ENST00000554444 GLE1Q53GS7 698 aaKnown RBP17.02■□□□□ 0.32
TUBB3-206ENST00000554444 MFSD14CQ5VZR4 134 aa17.02■□□□□ 0.32
TUBB3-206ENST00000554444 NOP9Q86U38 636 aaKnown RBP17.02■□□□□ 0.32
TUBB3-206ENST00000554444 SLC47A2Q86VL8 602 aa17.02■□□□□ 0.32
TUBB3-206ENST00000554444 TMEM192Q8IY95 271 aa17.02■□□□□ 0.32
TUBB3-206ENST00000554444 LRRC57Q8N9N7 239 aa17.02■□□□□ 0.32
TUBB3-206ENST00000554444 VIPAS39Q9H9C1 493 aa17.02■□□□□ 0.32
TUBB3-206ENST00000554444 C1orf112Q9NSG2 853 aa17.02■□□□□ 0.32
TUBB3-206ENST00000554444 MYL3P08590 195 aa17.02■□□□□ 0.31
TUBB3-206ENST00000554444 CYP11B1P15538 503 aa17.02■□□□□ 0.31
TUBB3-206ENST00000554444 USP8P40818 1118 aa17.02■□□□□ 0.31
TUBB3-206ENST00000554444 GALCP54803 685 aa17.02■□□□□ 0.31
TUBB3-206ENST00000554444 NKX3-2P78367 333 aa17.02■□□□□ 0.31
TUBB3-206ENST00000554444 TMEM132AQ24JP5 1023 aa17.02■□□□□ 0.31
TUBB3-206ENST00000554444 KIZQ2M2Z5 673 aa17.02■□□□□ 0.31
TUBB3-206ENST00000554444 PALB2Q86YC2 1186 aa17.02■□□□□ 0.31
TUBB3-206ENST00000554444 PPP1R13LQ8WUF5 828 aa17.02■□□□□ 0.31
TUBB3-206ENST00000554444 DDX1Q92499 740 aaKnown RBP17.02■□□□□ 0.31
TUBB3-206ENST00000554444 DHX38Q92620 1227 aaKnown RBP17.02■□□□□ 0.31
TUBB3-206ENST00000554444 CPB2Q96IY4 423 aa17.02■□□□□ 0.31
TUBB3-206ENST00000554444 CAPNS2Q96L46 248 aa17.02■□□□□ 0.31
TUBB3-206ENST00000554444 KATNAL1Q9BW62 490 aa17.02■□□□□ 0.31
TUBB3-206ENST00000554444 ISCUQ9H1K1 167 aa17.02■□□□□ 0.31
TUBB3-206ENST00000554444 ACP6Q9NPH0 428 aa17.02■□□□□ 0.31
TUBB3-206ENST00000554444 NCANO14594 1321 aa17.01■□□□□ 0.31
TUBB3-206ENST00000554444 MEFVO15553 781 aaPredicted RBP17.01■□□□□ 0.31
TUBB3-206ENST00000554444 KPNA6O60684 536 aa17.01■□□□□ 0.31
TUBB3-206ENST00000554444 CLTAP09496 248 aa17.01■□□□□ 0.31
TUBB3-206ENST00000554444 CYP2C9P11712 490 aa17.01■□□□□ 0.31
TUBB3-206ENST00000554444 ACO1P21399 889 aaKnown RBP17.01■□□□□ 0.31
TUBB3-206ENST00000554444 PRKCZQ05513 592 aa17.01■□□□□ 0.31
TUBB3-206ENST00000554444 CASP8Q14790 479 aa17.01■□□□□ 0.31
TUBB3-206ENST00000554444 SPOPLQ6IQ16 392 aa17.01■□□□□ 0.31
TUBB3-206ENST00000554444 RUFY4Q6ZNE9 571 aa17.01■□□□□ 0.31
TUBB3-206ENST00000554444 SLFN11Q7Z7L1 901 aa17.01■□□□□ 0.31
TUBB3-206ENST00000554444 SYCE1Q8N0S2 351 aa17.01■□□□□ 0.31
TUBB3-206ENST00000554444 MTMR12Q9C0I1 747 aa17.01■□□□□ 0.31
TUBB3-206ENST00000554444 ACBD3Q9H3P7 528 aa17.01■□□□□ 0.31
TUBB3-206ENST00000554444 RPF1Q9H9Y2 349 aaKnown RBP17.01■□□□□ 0.31
TUBB3-206ENST00000554444 CDHR5Q9HBB8 845 aa17.01■□□□□ 0.31
TUBB3-206ENST00000554444 TAS2R14Q9NYV8 317 aa17.01■□□□□ 0.31
TUBB3-206ENST00000554444 CENPFP49454 3210 aa17.01■□□□□ 0.31
TUBB3-206ENST00000554444 PHACTR2O75167 634 aa17■□□□□ 0.31
TUBB3-206ENST00000554444 IL18RAPO95256 599 aa17■□□□□ 0.31
TUBB3-206ENST00000554444 FTCDO95954 541 aa17■□□□□ 0.31
TUBB3-206ENST00000554444 ASS1P00966 412 aaKnown RBP17■□□□□ 0.31
TUBB3-206ENST00000554444 TMEM253P0C7T8 217 aa17■□□□□ 0.31
TUBB3-206ENST00000554444 STAG3L1P0CL83 205 aa17■□□□□ 0.31
TUBB3-206ENST00000554444 HOXA11P31270 313 aaPredicted RBP17■□□□□ 0.31
TUBB3-206ENST00000554444 CXCR5P32302 372 aa17■□□□□ 0.31
TUBB3-206ENST00000554444 OSTNP61366 133 aa17■□□□□ 0.31
TUBB3-206ENST00000554444 TERF2Q15554 542 aa17■□□□□ 0.31
TUBB3-206ENST00000554444 EFCAB13Q8IY85 973 aa17■□□□□ 0.31
TUBB3-206ENST00000554444 RPUSD2Q8IZ73 545 aaKnown RBP17■□□□□ 0.31
TUBB3-206ENST00000554444 TPCN2Q8NHX9 752 aa17■□□□□ 0.31
TUBB3-206ENST00000554444 FAM212AQ96EL1 285 aa17■□□□□ 0.31
TUBB3-206ENST00000554444 CALR3Q96L12 384 aaKnown RBP17■□□□□ 0.31
TUBB3-206ENST00000554444 PCDHB18PQ96TA0 734 aa17■□□□□ 0.31
TUBB3-206ENST00000554444 CFHR5Q9BXR6 569 aa17■□□□□ 0.31
TUBB3-206ENST00000554444 FAM49AQ9H0Q0 323 aaPredicted RBP17■□□□□ 0.31
TUBB3-206ENST00000554444 CNTN6Q9UQ52 1028 aa17■□□□□ 0.31
TUBB3-206ENST00000554444 NUB1Q9Y5A7 615 aa17■□□□□ 0.31
TUBB3-206ENST00000554444 MYADML2A6NDP7 307 aa17■□□□□ 0.31
TUBB3-206ENST00000554444 TREHO43280 583 aa17■□□□□ 0.31
TUBB3-206ENST00000554444 GZMAP12544 262 aa17■□□□□ 0.31
TUBB3-206ENST00000554444 SP3Q02447 781 aa17■□□□□ 0.31
TUBB3-206ENST00000554444 DMTNQ08495 405 aa17■□□□□ 0.31
TUBB3-206ENST00000554444 CUL2Q13617 745 aa17■□□□□ 0.31
TUBB3-206ENST00000554444 PCBP1Q15365 356 aaKnown RBP eCLIP17■□□□□ 0.31
TUBB3-206ENST00000554444 RPS6KA1Q15418 735 aa17■□□□□ 0.31
TUBB3-206ENST00000554444 KYAT1Q16773 422 aa17■□□□□ 0.31
TUBB3-206ENST00000554444 CCNI2Q6ZMN8 369 aaPredicted RBP17■□□□□ 0.31
TUBB3-206ENST00000554444 UBE2Q2Q8WVN8 375 aa17■□□□□ 0.31
TUBB3-206ENST00000554444 TAF4BQ92750 862 aa17■□□□□ 0.31
TUBB3-206ENST00000554444 PBKQ96KB5 322 aa17■□□□□ 0.31
TUBB3-206ENST00000554444 GCOM2Q9BZD3 368 aaPredicted RBP17■□□□□ 0.31
TUBB3-206ENST00000554444 UPF3AQ9H1J1 476 aaKnown RBP17■□□□□ 0.31
TUBB3-206ENST00000554444 CREBZFQ9NS37 354 aa17■□□□□ 0.31
TUBB3-206ENST00000554444 ANKRD62A6NC57 917 aa16.99■□□□□ 0.31
TUBB3-206ENST00000554444 SEPT4O43236 478 aa16.99■□□□□ 0.31
TUBB3-206ENST00000554444 ERLIN2O94905 339 aa16.99■□□□□ 0.31
TUBB3-206ENST00000554444 KIF4AO95239 1232 aa16.99■□□□□ 0.31
TUBB3-206ENST00000554444 C6orf222P0C671 652 aaPredicted RBP16.99■□□□□ 0.31
TUBB3-206ENST00000554444 CXCL8P10145 99 aa16.99■□□□□ 0.31
TUBB3-206ENST00000554444 TNFRSF8P28908 595 aa16.99■□□□□ 0.31
TUBB3-206ENST00000554444 NOP2P46087 812 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms