RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 SUMF1Q8NBK3 374 aa6.68□□□□□ -1.34
ATXN3-226ENST00000554350 SEPT8Q92599 483 aa6.68□□□□□ -1.34
ATXN3-226ENST00000554350 PRDM14Q9GZV8 571 aa6.68□□□□□ -1.34
ATXN3-226ENST00000554350 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.68□□□□□ -1.34
ATXN3-226ENST00000554350 ACAD9Q9H845 621 aa6.68□□□□□ -1.34
ATXN3-226ENST00000554350 EPB41L4AQ9HCS5 686 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-226ENST00000554350 PARD6AQ9NPB6 346 aa6.68□□□□□ -1.34
ATXN3-226ENST00000554350 CRTAC1Q9NQ79 661 aa6.68□□□□□ -1.34
ATXN3-226ENST00000554350 ADAMTS1Q9UHI8 967 aa6.68□□□□□ -1.34
ATXN3-226ENST00000554350 CNOT6Q9ULM6 557 aaKnown RBP6.68□□□□□ -1.34
ATXN3-226ENST00000554350 KCTD3Q9Y597 815 aa6.68□□□□□ -1.34
ATXN3-226ENST00000554350 EMSYQ7Z589 1322 aa6.68□□□□□ -1.34
ATXN3-226ENST00000554350 GCN1Q92616 2671 aaKnown RBP6.68□□□□□ -1.34
ATXN3-226ENST00000554350 HRKO00198 91 aa6.67□□□□□ -1.34
ATXN3-226ENST00000554350 TRIM13O60858 407 aa6.67□□□□□ -1.34
ATXN3-226ENST00000554350 UQCRFS1P1P0C7P4 283 aa6.67□□□□□ -1.34
ATXN3-226ENST00000554350 DNAJB1P25685 340 aa6.67□□□□□ -1.34
ATXN3-226ENST00000554350 EPHB3P54753 998 aa6.67□□□□□ -1.34
ATXN3-226ENST00000554350 EXOSC9Q06265 439 aaKnown RBP6.67□□□□□ -1.34
ATXN3-226ENST00000554350 BTG3Q14201 252 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-226ENST00000554350 KIR3DS1Q14943 382 aa6.67□□□□□ -1.34
ATXN3-226ENST00000554350 PPP2R5BQ15173 497 aa6.67□□□□□ -1.34
ATXN3-226ENST00000554350 TTC39AQ5SRH9 613 aa6.67□□□□□ -1.34
ATXN3-226ENST00000554350 WDR63Q8IWG1 891 aa6.67□□□□□ -1.34
ATXN3-226ENST00000554350 C7orf31Q8N865 590 aa6.67□□□□□ -1.34
ATXN3-226ENST00000554350 TDRD5Q8NAT2 981 aaKnown RBP6.67□□□□□ -1.34
ATXN3-226ENST00000554350 PRPF38AQ8NAV1 312 aaKnown RBP6.67□□□□□ -1.34
ATXN3-226ENST00000554350 PANK1Q8TE04 598 aa6.67□□□□□ -1.34
ATXN3-226ENST00000554350 POF1BQ8WVV4 589 aa6.67□□□□□ -1.34
ATXN3-226ENST00000554350 ZNF512BQ96KM6 892 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-226ENST00000554350 ALG1Q9BT22 464 aa6.67□□□□□ -1.34
ATXN3-226ENST00000554350 CNTD2Q9H8S5 307 aa6.67□□□□□ -1.34
ATXN3-226ENST00000554350 ERVK-5Q9HDB9 667 aa6.67□□□□□ -1.34
ATXN3-226ENST00000554350 GPR108Q9NPR9 543 aa6.67□□□□□ -1.34
ATXN3-226ENST00000554350 MCM9Q9NXL9 1143 aa6.67□□□□□ -1.34
ATXN3-226ENST00000554350 ZMYM5Q9UJ78 669 aa6.67□□□□□ -1.34
ATXN3-226ENST00000554350 ADGRA3Q8IWK6 1321 aa6.67□□□□□ -1.34
ATXN3-226ENST00000554350 NAV2Q8IVL1 2488 aa6.67□□□□□ -1.34
ATXN3-226ENST00000554350 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-226ENST00000554350 RSPH10B2B2RC85 870 aa6.66□□□□□ -1.34
ATXN3-226ENST00000554350 SIGLEC6O43699 453 aa6.66□□□□□ -1.34
ATXN3-226ENST00000554350 IDH1O75874 414 aaKnown RBP6.66□□□□□ -1.34
ATXN3-226ENST00000554350 ITGB1P05556 798 aa6.66□□□□□ -1.34
ATXN3-226ENST00000554350 DCNP07585 359 aaKnown RBP6.66□□□□□ -1.34
ATXN3-226ENST00000554350 SYPP08247 313 aa6.66□□□□□ -1.34
ATXN3-226ENST00000554350 MMP3P08254 477 aa6.66□□□□□ -1.34
ATXN3-226ENST00000554350 CT47B1P0C2W7 299 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-226ENST00000554350 RSPH10BP0C881 870 aa6.66□□□□□ -1.34
ATXN3-226ENST00000554350 THPOP40225 353 aa6.66□□□□□ -1.34
ATXN3-226ENST00000554350 RBM25P49756 843 aaKnown RBP6.66□□□□□ -1.34
ATXN3-226ENST00000554350 PCBP3P57721 371 aaKnown RBP6.66□□□□□ -1.34
ATXN3-226ENST00000554350 YBX1P67809 324 aaKnown RBP6.66□□□□□ -1.34
ATXN3-226ENST00000554350 CLCQ05315 142 aa6.66□□□□□ -1.34
ATXN3-226ENST00000554350 CAMK1Q14012 370 aa6.66□□□□□ -1.34
ATXN3-226ENST00000554350 UNQ6494/PRO21346Q6UXR6 183 aa6.66□□□□□ -1.34
ATXN3-226ENST00000554350 CEP128Q6ZU80 1094 aa6.66□□□□□ -1.34
ATXN3-226ENST00000554350 CERS3Q8IU89 383 aa6.66□□□□□ -1.34
ATXN3-226ENST00000554350 COPS5Q92905 334 aa6.66□□□□□ -1.34
ATXN3-226ENST00000554350 DYNLL2Q96FJ2 89 aa6.66□□□□□ -1.34
ATXN3-226ENST00000554350 CTAGE1Q96RT6 745 aa6.66□□□□□ -1.34
ATXN3-226ENST00000554350 USP44Q9H0E7 712 aa6.66□□□□□ -1.34
ATXN3-226ENST00000554350 ANTXR1Q9H6X2 564 aa6.66□□□□□ -1.34
ATXN3-226ENST00000554350 A1CFQ9NQ94 594 aaKnown RBP6.66□□□□□ -1.34
ATXN3-226ENST00000554350 RNF146Q9NTX7 359 aa6.66□□□□□ -1.34
ATXN3-226ENST00000554350 CDH22Q9UJ99 828 aa6.66□□□□□ -1.34
ATXN3-226ENST00000554350 FRYLO94915 3013 aa6.66□□□□□ -1.34
ATXN3-226ENST00000554350 ASH1LQ9NR48 2969 aaKnown RBP6.65□□□□□ -1.34
ATXN3-226ENST00000554350 EIF4E1BA6NMX2 242 aaKnown RBP6.65□□□□□ -1.34
ATXN3-226ENST00000554350 FADS2P1A8MWK0 482 aa6.65□□□□□ -1.34
ATXN3-226ENST00000554350 SLC30A4O14863 429 aa6.65□□□□□ -1.34
ATXN3-226ENST00000554350 ATP2A1O14983 1001 aa6.65□□□□□ -1.34
ATXN3-226ENST00000554350 CYP2D6P10635 497 aa6.65□□□□□ -1.34
ATXN3-226ENST00000554350 ALAS1P13196 640 aa6.65□□□□□ -1.34
ATXN3-226ENST00000554350 PNLIPP16233 465 aa6.65□□□□□ -1.34
ATXN3-226ENST00000554350 BMP7P18075 431 aa6.65□□□□□ -1.34
ATXN3-226ENST00000554350 PI3P19957 117 aa6.65□□□□□ -1.34
ATXN3-226ENST00000554350 PMLP29590 882 aa6.65□□□□□ -1.34
ATXN3-226ENST00000554350 VIPR1P32241 457 aa6.65□□□□□ -1.34
ATXN3-226ENST00000554350 CTSKP43235 329 aa6.65□□□□□ -1.34
ATXN3-226ENST00000554350 SRSF3P84103 164 aaKnown RBP6.65□□□□□ -1.34
ATXN3-226ENST00000554350 GABPAQ06546 454 aa6.65□□□□□ -1.34
ATXN3-226ENST00000554350 RBL2Q08999 1139 aa6.65□□□□□ -1.34
ATXN3-226ENST00000554350 IKQ13123 557 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-226ENST00000554350 N4BP2L1Q5TBK1 243 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-226ENST00000554350 CES5AQ6NT32 575 aa6.65□□□□□ -1.34
ATXN3-226ENST00000554350 ANKRD54Q6NXT1 300 aa6.65□□□□□ -1.34
ATXN3-226ENST00000554350 NSMFQ6X4W1 530 aa6.65□□□□□ -1.34
ATXN3-226ENST00000554350 C1orf210Q8IVY1 113 aa6.65□□□□□ -1.34
ATXN3-226ENST00000554350 DHX37Q8IY37 1157 aaKnown RBP6.65□□□□□ -1.34
ATXN3-226ENST00000554350 VN1R2Q8NFZ6 395 aa6.65□□□□□ -1.34
ATXN3-226ENST00000554350 EXOC6Q8TAG9 804 aa6.65□□□□□ -1.34
ATXN3-226ENST00000554350 SPPL3Q8TCT6 385 aa6.65□□□□□ -1.34
ATXN3-226ENST00000554350 ATRIPQ8WXE1 791 aa6.65□□□□□ -1.34
ATXN3-226ENST00000554350 DACT3Q96B18 629 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-226ENST00000554350 POMKQ9H5K3 350 aa6.65□□□□□ -1.34
ATXN3-226ENST00000554350 PIH1D3Q9NQM4 214 aaKnown RBP6.65□□□□□ -1.34
ATXN3-226ENST00000554350 UBP1Q9NZI7 540 aa6.65□□□□□ -1.34
ATXN3-226ENST00000554350 HDAC6Q9UBN7 1215 aa6.65□□□□□ -1.34
ATXN3-226ENST00000554350 SWAP70Q9UH65 585 aa6.65□□□□□ -1.34
ATXN3-226ENST00000554350 GMEB2Q9UKD1 530 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms