RNA–Protein interactions for RNA: ENST00000554227.6

SNRPN-207, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

TSL 5 BASIC

Gene SNRPN, Length 1,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-207ENST00000554227 SIX4Q9UIU6 781 aa20.59■□□□□ 0.89
SNRPN-207ENST00000554227 PDCD11Q14690 1871 aaKnown RBP20.58■□□□□ 0.89
SNRPN-207ENST00000554227 ZC3H11AO75152 810 aaKnown RBP eCLIP20.58■□□□□ 0.89
SNRPN-207ENST00000554227 ABL1P00519 1130 aa20.58■□□□□ 0.89
SNRPN-207ENST00000554227 CYLC1P35663 651 aaPredicted RBP20.58■□□□□ 0.89
SNRPN-207ENST00000554227 USP8P40818 1118 aa20.58■□□□□ 0.89
SNRPN-207ENST00000554227 MFAP3P55082 362 aa20.58■□□□□ 0.89
SNRPN-207ENST00000554227 POU5F1Q01860 360 aaKnown RBP20.58■□□□□ 0.89
SNRPN-207ENST00000554227 GFPT1Q06210 699 aaPredicted RBP20.58■□□□□ 0.89
SNRPN-207ENST00000554227 MAPK8IP2Q13387 824 aaPredicted RBP20.58■□□□□ 0.89
SNRPN-207ENST00000554227 TMEM132DQ14C87 1099 aa20.58■□□□□ 0.89
SNRPN-207ENST00000554227 FBXO46Q6PJ61 603 aaPredicted RBP20.58■□□□□ 0.89
SNRPN-207ENST00000554227 SNX27Q96L92 541 aa20.58■□□□□ 0.89
SNRPN-207ENST00000554227 DEF6Q9H4E7 631 aa20.58■□□□□ 0.89
SNRPN-207ENST00000554227 ERVK-5Q9HDB9 667 aa20.58■□□□□ 0.89
SNRPN-207ENST00000554227 C1orf112Q9NSG2 853 aa20.58■□□□□ 0.89
SNRPN-207ENST00000554227 PARP2Q9UGN5 583 aa20.58■□□□□ 0.89
SNRPN-207ENST00000554227 EIF3CLB5ME19 914 aaKnown RBP20.57■□□□□ 0.88
SNRPN-207ENST00000554227 ZSCAN12O43309 604 aa20.57■□□□□ 0.88
SNRPN-207ENST00000554227 AKR1B10O60218 316 aa20.57■□□□□ 0.88
SNRPN-207ENST00000554227 MGEA5O60502 916 aa20.57■□□□□ 0.88
SNRPN-207ENST00000554227 KRT19P08727 400 aa20.57■□□□□ 0.88
SNRPN-207ENST00000554227 FERP16591 822 aa20.57■□□□□ 0.88
SNRPN-207ENST00000554227 ATN1P54259 1190 aaPredicted RBP20.57■□□□□ 0.88
SNRPN-207ENST00000554227 NOP14P78316 857 aaKnown RBP20.57■□□□□ 0.88
SNRPN-207ENST00000554227 TRPC3Q13507 836 aa20.57■□□□□ 0.88
SNRPN-207ENST00000554227 MBTPS1Q14703 1052 aa20.57■□□□□ 0.88
SNRPN-207ENST00000554227 GLRA4Q5JXX5 417 aa20.57■□□□□ 0.88
SNRPN-207ENST00000554227 U2AF1L4Q8WU68 220 aaKnown RBP20.57■□□□□ 0.88
SNRPN-207ENST00000554227 KIF12Q96FN5 646 aa20.57■□□□□ 0.88
SNRPN-207ENST00000554227 EIF3CQ99613 913 aaKnown RBP20.57■□□□□ 0.88
SNRPN-207ENST00000554227 ACP6Q9NPH0 428 aa20.57■□□□□ 0.88
SNRPN-207ENST00000554227 DAAM1Q9Y4D1 1078 aa20.57■□□□□ 0.88
SNRPN-207ENST00000554227 SSU72P8A0A1W2PR75 194 aa20.57■□□□□ 0.88
SNRPN-207ENST00000554227 MEIS3P2A8K0S8 358 aa20.57■□□□□ 0.88
SNRPN-207ENST00000554227 GPR182O15218 404 aa20.57■□□□□ 0.88
SNRPN-207ENST00000554227 ASS1P00966 412 aaKnown RBP20.57■□□□□ 0.88
SNRPN-207ENST00000554227 TFRCP02786 760 aaKnown RBP20.57■□□□□ 0.88
SNRPN-207ENST00000554227 ITGB3P05106 788 aa20.57■□□□□ 0.88
SNRPN-207ENST00000554227 PRKCIP41743 596 aa20.57■□□□□ 0.88
SNRPN-207ENST00000554227 YARSP54577 528 aaKnown RBP20.57■□□□□ 0.88
SNRPN-207ENST00000554227 PAK2Q13177 524 aa20.57■□□□□ 0.88
SNRPN-207ENST00000554227 ALKAL1Q6UXT8 129 aa20.57■□□□□ 0.88
SNRPN-207ENST00000554227 FAM126BQ8IXS8 530 aa20.57■□□□□ 0.88
SNRPN-207ENST00000554227 CXorf38Q8TB03 319 aa20.57■□□□□ 0.88
SNRPN-207ENST00000554227 SHC3Q92529 594 aa20.57■□□□□ 0.88
SNRPN-207ENST00000554227 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.57■□□□□ 0.88
SNRPN-207ENST00000554227 PCDHB2Q9Y5E7 798 aa20.57■□□□□ 0.88
SNRPN-207ENST00000554227 KIAA0100Q14667 2235 aaKnown RBP20.56■□□□□ 0.88
SNRPN-207ENST00000554227 A0A087X0T9 212 aa20.56■□□□□ 0.88
SNRPN-207ENST00000554227 SGPL1O95470 568 aa20.56■□□□□ 0.88
SNRPN-207ENST00000554227 CALCAP01258 141 aa20.56■□□□□ 0.88
SNRPN-207ENST00000554227 FAM228BP0C875 321 aa20.56■□□□□ 0.88
SNRPN-207ENST00000554227 HSPA1AP0DMV8 641 aaKnown RBP20.56■□□□□ 0.88
SNRPN-207ENST00000554227 HSPA1BP0DMV9 641 aaKnown RBP20.56■□□□□ 0.88
SNRPN-207ENST00000554227 GCNT1Q02742 428 aa20.56■□□□□ 0.88
SNRPN-207ENST00000554227 CRISPLD2Q9H0B8 497 aa20.56■□□□□ 0.88
SNRPN-207ENST00000554227 XYLT2Q9H1B5 865 aa20.56■□□□□ 0.88
SNRPN-207ENST00000554227 PLEKHA5Q9HAU0 1116 aa20.56■□□□□ 0.88
SNRPN-207ENST00000554227 LZTFL1Q9NQ48 299 aa20.56■□□□□ 0.88
SNRPN-207ENST00000554227 ADAMTS1Q9UHI8 967 aa20.56■□□□□ 0.88
SNRPN-207ENST00000554227 SCN1AP35498 2009 aa20.55■□□□□ 0.88
SNRPN-207ENST00000554227 CYP26A1O43174 497 aa20.55■□□□□ 0.88
SNRPN-207ENST00000554227 PQBP1O60828 265 aaKnown RBP20.55■□□□□ 0.88
SNRPN-207ENST00000554227 IBSPP21815 317 aaPredicted RBP20.55■□□□□ 0.88
SNRPN-207ENST00000554227 CLCN1P35523 988 aa20.55■□□□□ 0.88
SNRPN-207ENST00000554227 CUL2Q13617 745 aa20.55■□□□□ 0.88
SNRPN-207ENST00000554227 FAM71AQ8IYT1 594 aa20.55■□□□□ 0.88
SNRPN-207ENST00000554227 OLIG1Q8TAK6 271 aa20.55■□□□□ 0.88
SNRPN-207ENST00000554227 DIS3LQ8TF46 1054 aaKnown RBP20.55■□□□□ 0.88
SNRPN-207ENST00000554227 C18orf25Q96B23 403 aaPredicted RBP20.55■□□□□ 0.88
SNRPN-207ENST00000554227 CHST12Q9NRB3 414 aa20.55■□□□□ 0.88
SNRPN-207ENST00000554227 FAM105AQ9NUU6 356 aa20.55■□□□□ 0.88
SNRPN-207ENST00000554227 DPP3Q9NY33 737 aa20.55■□□□□ 0.88
SNRPN-207ENST00000554227 C2CD2Q9Y426 696 aa20.55■□□□□ 0.88
SNRPN-207ENST00000554227 FAM170AA1A519 330 aa20.54■□□□□ 0.88
SNRPN-207ENST00000554227 RCCD1A6NED2 376 aa20.54■□□□□ 0.88
SNRPN-207ENST00000554227 CD4P01730 458 aa20.54■□□□□ 0.88
SNRPN-207ENST00000554227 POLR2BP30876 1174 aaKnown RBP20.54■□□□□ 0.88
SNRPN-207ENST00000554227 SGSM1Q2NKQ1 1148 aa20.54■□□□□ 0.88
SNRPN-207ENST00000554227 NYAP1Q6ZVC0 841 aa20.54■□□□□ 0.88
SNRPN-207ENST00000554227 DNAAF5Q86Y56 855 aa20.54■□□□□ 0.88
SNRPN-207ENST00000554227 LPPQ93052 612 aa20.54■□□□□ 0.88
SNRPN-207ENST00000554227 TUBGCP4Q9UGJ1 667 aa20.54■□□□□ 0.88
SNRPN-207ENST00000554227 LCA5LO95447 670 aa20.54■□□□□ 0.88
SNRPN-207ENST00000554227 ZSCAN20P17040 1043 aaPredicted RBP20.54■□□□□ 0.88
SNRPN-207ENST00000554227 CD302Q8IX05 232 aa20.54■□□□□ 0.88
SNRPN-207ENST00000554227 SLC20A1Q8WUM9 679 aa20.54■□□□□ 0.88
SNRPN-207ENST00000554227 IMPG2Q9BZV3 1241 aa20.54■□□□□ 0.88
SNRPN-207ENST00000554227 CNTN3Q9P232 1028 aa20.54■□□□□ 0.88
SNRPN-207ENST00000554227 TRIM10Q9UDY6 481 aa20.54■□□□□ 0.88
SNRPN-207ENST00000554227 POLIQ9UNA4 740 aa20.54■□□□□ 0.88
SNRPN-207ENST00000554227 AGAP1Q9UPQ3 857 aa20.54■□□□□ 0.88
SNRPN-207ENST00000554227 BZW2Q9Y6E2 419 aaKnown RBP20.54■□□□□ 0.88
SNRPN-207ENST00000554227 SMIM28A0A1B0GU29 152 aa20.53■□□□□ 0.88
SNRPN-207ENST00000554227 PPEF2O14830 753 aa20.53■□□□□ 0.88
SNRPN-207ENST00000554227 CCP110O43303 1012 aa20.53■□□□□ 0.88
SNRPN-207ENST00000554227 CAND2O75155 1236 aa20.53■□□□□ 0.88
SNRPN-207ENST00000554227 KRT5P13647 590 aa20.53■□□□□ 0.88
SNRPN-207ENST00000554227 ACO1P21399 889 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms