RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 TRIM59Q8IWR1 403 aa19.95■□□□□ 0.78
PSEN1-210ENST00000554131 C1orf127Q8N9H9 656 aa19.95■□□□□ 0.78
PSEN1-210ENST00000554131 SLC35C1Q96A29 364 aa19.95■□□□□ 0.78
PSEN1-210ENST00000554131 MTMR12Q9C0I1 747 aa19.95■□□□□ 0.78
PSEN1-210ENST00000554131 SIX4Q9UIU6 781 aa19.95■□□□□ 0.78
PSEN1-210ENST00000554131 ANO9A1A5B4 782 aa19.94■□□□□ 0.78
PSEN1-210ENST00000554131 C5orf67F2Z3F1 127 aa19.94■□□□□ 0.78
PSEN1-210ENST00000554131 NRP1O14786 923 aa19.94■□□□□ 0.78
PSEN1-210ENST00000554131 PPEF2O14830 753 aa19.94■□□□□ 0.78
PSEN1-210ENST00000554131 IKBKBO14920 756 aa19.94■□□□□ 0.78
PSEN1-210ENST00000554131 EFEMP2O95967 443 aa19.94■□□□□ 0.78
PSEN1-210ENST00000554131 C4BPAP04003 597 aaKnown RBP19.94■□□□□ 0.78
PSEN1-210ENST00000554131 LAG3P18627 525 aa19.94■□□□□ 0.78
PSEN1-210ENST00000554131 BMPR1AP36894 532 aa19.94■□□□□ 0.78
PSEN1-210ENST00000554131 ZNF165P49910 485 aa19.94■□□□□ 0.78
PSEN1-210ENST00000554131 CLCNKBP51801 687 aa19.94■□□□□ 0.78
PSEN1-210ENST00000554131 TFAMQ00059 246 aaKnown RBP19.94■□□□□ 0.78
PSEN1-210ENST00000554131 PPP3CAQ08209 521 aa19.94■□□□□ 0.78
PSEN1-210ENST00000554131 C15orf39Q6ZRI6 1047 aa19.94■□□□□ 0.78
PSEN1-210ENST00000554131 SLC39A11Q8N1S5 342 aa19.94■□□□□ 0.78
PSEN1-210ENST00000554131 AOPEPQ8N6M6 819 aa19.94■□□□□ 0.78
PSEN1-210ENST00000554131 C3orf58Q8NDZ4 430 aa19.94■□□□□ 0.78
PSEN1-210ENST00000554131 RABGGTAQ92696 567 aa19.94■□□□□ 0.78
PSEN1-210ENST00000554131 TIFAQ96CG3 184 aa19.94■□□□□ 0.78
PSEN1-210ENST00000554131 CNOT6LQ96LI5 555 aaKnown RBP19.94■□□□□ 0.78
PSEN1-210ENST00000554131 METTL14Q9HCE5 456 aaKnown RBP19.94■□□□□ 0.78
PSEN1-210ENST00000554131 ARMCX3Q9UH62 379 aaPredicted RBP19.94■□□□□ 0.78
PSEN1-210ENST00000554131 COL4A4P53420 1690 aaPredicted RBP19.94■□□□□ 0.78
PSEN1-210ENST00000554131 CDH23Q9H251 3354 aa19.93■□□□□ 0.78
PSEN1-210ENST00000554131 NT5C1B-RDH14C9J2C7 533 aa19.93■□□□□ 0.78
PSEN1-210ENST00000554131 PIRO00625 290 aa19.93■□□□□ 0.78
PSEN1-210ENST00000554131 FGFR1OPO95684 399 aaKnown RBP19.93■□□□□ 0.78
PSEN1-210ENST00000554131 GNA14O95837 355 aa19.93■□□□□ 0.78
PSEN1-210ENST00000554131 ITGB1P05556 798 aa19.93■□□□□ 0.78
PSEN1-210ENST00000554131 ZNF18P17022 549 aa19.93■□□□□ 0.78
PSEN1-210ENST00000554131 BEST2Q8NFU1 509 aa19.93■□□□□ 0.78
PSEN1-210ENST00000554131 UROC1Q96N76 676 aa19.93■□□□□ 0.78
PSEN1-210ENST00000554131 ZNF558Q96NG5 402 aa19.93■□□□□ 0.78
PSEN1-210ENST00000554131 FAM193BQ96PV7 902 aaPredicted RBP19.93■□□□□ 0.78
PSEN1-210ENST00000554131 TGS1Q96RS0 853 aaKnown RBP19.93■□□□□ 0.78
PSEN1-210ENST00000554131 FNBP1Q96RU3 617 aa19.93■□□□□ 0.78
PSEN1-210ENST00000554131 NAT10Q9H0A0 1025 aaKnown RBP19.93■□□□□ 0.78
PSEN1-210ENST00000554131 CBX8Q9HC52 389 aa19.93■□□□□ 0.78
PSEN1-210ENST00000554131 FANCLQ9NW38 375 aa19.93■□□□□ 0.78
PSEN1-210ENST00000554131 DPP3Q9NY33 737 aa19.93■□□□□ 0.78
PSEN1-210ENST00000554131 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.93■□□□□ 0.78
PSEN1-210ENST00000554131 SCN1AP35498 2009 aa19.92■□□□□ 0.78
PSEN1-210ENST00000554131 TMEM189-UBE2V1I3L0A0 370 aa19.92■□□□□ 0.78
PSEN1-210ENST00000554131 PODXLO00592 558 aa19.92■□□□□ 0.78
PSEN1-210ENST00000554131 KIF4AO95239 1232 aa19.92■□□□□ 0.78
PSEN1-210ENST00000554131 KRT13P13646 458 aa19.92■□□□□ 0.78
PSEN1-210ENST00000554131 TNNI1P19237 187 aa19.92■□□□□ 0.78
PSEN1-210ENST00000554131 RPL9P32969 192 aaKnown RBP19.92■□□□□ 0.78
PSEN1-210ENST00000554131 DUOXA2Q1HG44 320 aa19.92■□□□□ 0.78
PSEN1-210ENST00000554131 CCDC40Q4G0X9 1142 aa19.92■□□□□ 0.78
PSEN1-210ENST00000554131 EPC2Q52LR7 807 aa19.92■□□□□ 0.78
PSEN1-210ENST00000554131 HABP4Q5JVS0 413 aaKnown RBP19.92■□□□□ 0.78
PSEN1-210ENST00000554131 TDRD10Q5VZ19 366 aaKnown RBP19.92■□□□□ 0.78
PSEN1-210ENST00000554131 C9orf57Q5W0N0 161 aa19.92■□□□□ 0.78
PSEN1-210ENST00000554131 PPP2R2DQ66LE6 453 aa19.92■□□□□ 0.78
PSEN1-210ENST00000554131 TRAPPC11Q7Z392 1133 aa19.92■□□□□ 0.78
PSEN1-210ENST00000554131 LRCH3Q96II8 777 aa19.92■□□□□ 0.78
PSEN1-210ENST00000554131 VN1R3Q9BXE9 311 aa19.92■□□□□ 0.78
PSEN1-210ENST00000554131 EPOPA6NHQ4 379 aa19.91■□□□□ 0.78
PSEN1-210ENST00000554131 XPOTO43592 962 aaKnown RBP19.91■□□□□ 0.78
PSEN1-210ENST00000554131 VNN1O95497 513 aa19.91■□□□□ 0.78
PSEN1-210ENST00000554131 ALDH2P05091 517 aa19.91■□□□□ 0.78
PSEN1-210ENST00000554131 TMEM191BP0C7N4 346 aa19.91■□□□□ 0.78
PSEN1-210ENST00000554131 OR1G1P47890 313 aa19.91■□□□□ 0.78
PSEN1-210ENST00000554131 TPD52L1Q16890 204 aaPredicted RBP19.91■□□□□ 0.78
PSEN1-210ENST00000554131 ZACNQ401N2 412 aa19.91■□□□□ 0.78
PSEN1-210ENST00000554131 HSP90AA4PQ58FG1 418 aa19.91■□□□□ 0.78
PSEN1-210ENST00000554131 SV2AQ7L0J3 742 aa19.91■□□□□ 0.78
PSEN1-210ENST00000554131 RNF168Q8IYW5 571 aaPredicted RBP19.91■□□□□ 0.78
PSEN1-210ENST00000554131 CACTINQ8WUQ7 758 aaKnown RBP19.91■□□□□ 0.78
PSEN1-210ENST00000554131 DDX27Q96GQ7 796 aaKnown RBP19.91■□□□□ 0.78
PSEN1-210ENST00000554131 IGSF21Q96ID5 467 aa19.91■□□□□ 0.78
PSEN1-210ENST00000554131 ANKRD36BP1Q96IX9 119 aa19.91■□□□□ 0.78
PSEN1-210ENST00000554131 SAMD11Q96NU1 681 aa19.91■□□□□ 0.78
PSEN1-210ENST00000554131 PLVAPQ9BX97 442 aa19.91■□□□□ 0.78
PSEN1-210ENST00000554131 TTYH1Q9H313 450 aaPredicted RBP19.91■□□□□ 0.78
PSEN1-210ENST00000554131 SLC28A3Q9HAS3 691 aa19.91■□□□□ 0.78
PSEN1-210ENST00000554131 ITGA11Q9UKX5 1188 aa19.91■□□□□ 0.78
PSEN1-210ENST00000554131 FAN1Q9Y2M0 1017 aa19.91■□□□□ 0.78
PSEN1-210ENST00000554131 PRG3Q9Y2Y8 225 aaPredicted RBP19.91■□□□□ 0.78
PSEN1-210ENST00000554131 RWDD3Q9Y3V2 267 aa19.91■□□□□ 0.78
PSEN1-210ENST00000554131 ATG2AQ2TAZ0 1938 aa19.91■□□□□ 0.78
PSEN1-210ENST00000554131 TRANK1O15050 2925 aa19.9■□□□□ 0.78
PSEN1-210ENST00000554131 CAVIN2O95810 425 aa19.9■□□□□ 0.78
PSEN1-210ENST00000554131 CST3P01034 146 aaPredicted RBP19.9■□□□□ 0.78
PSEN1-210ENST00000554131 ITGB3P05106 788 aa19.9■□□□□ 0.78
PSEN1-210ENST00000554131 GTF2H1P32780 548 aa19.9■□□□□ 0.78
PSEN1-210ENST00000554131 CTNNB1P35222 781 aa19.9■□□□□ 0.78
PSEN1-210ENST00000554131 GCLMP48507 274 aa19.9■□□□□ 0.78
PSEN1-210ENST00000554131 ALDH7A1P49419 539 aaKnown RBP19.9■□□□□ 0.78
PSEN1-210ENST00000554131 AARSP49588 968 aaKnown RBP eCLIP19.9■□□□□ 0.78
PSEN1-210ENST00000554131 AP3M2P53677 418 aa19.9■□□□□ 0.78
PSEN1-210ENST00000554131 PLCB3Q01970 1234 aa19.9■□□□□ 0.78
PSEN1-210ENST00000554131 CBWD6Q4V339 395 aa19.9■□□□□ 0.78
PSEN1-210ENST00000554131 TCP11X2Q5H9J9 407 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms