RNA–Protein interactions for RNA: ENST00000553660.5

CNIH1-203, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 2 BASIC

Gene CNIH1, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-203ENST00000553660 ZNF396Q96N95 335 aaPredicted RBP11.71□□□□□ -0.53
CNIH1-203ENST00000553660 USP28Q96RU2 1077 aa11.71□□□□□ -0.53
CNIH1-203ENST00000553660 ADPGKQ9BRR6 497 aa11.71□□□□□ -0.53
CNIH1-203ENST00000553660 EIF2AQ9BY44 585 aaKnown RBP11.71□□□□□ -0.53
CNIH1-203ENST00000553660 NRDE2Q9H7Z3 1164 aa11.71□□□□□ -0.53
CNIH1-203ENST00000553660 PRDM6Q9NQX0 595 aa11.71□□□□□ -0.53
CNIH1-203ENST00000553660 BLOC1S4Q9NUP1 217 aa11.71□□□□□ -0.53
CNIH1-203ENST00000553660 LARSQ9P2J5 1176 aaKnown RBP11.71□□□□□ -0.53
CNIH1-203ENST00000553660 STK17AQ9UEE5 414 aa11.71□□□□□ -0.53
CNIH1-203ENST00000553660 ZNF232Q9UNY5 417 aa11.71□□□□□ -0.53
CNIH1-203ENST00000553660 TNFSF13BQ9Y275 285 aa11.71□□□□□ -0.53
CNIH1-203ENST00000553660 IRAK3Q9Y616 596 aa11.71□□□□□ -0.53
CNIH1-203ENST00000553660 REV3LO60673 3130 aa11.71□□□□□ -0.54
CNIH1-203ENST00000553660 MEIS3P2A8K0S8 358 aa11.7□□□□□ -0.54
CNIH1-203ENST00000553660 BRD1O95696 1058 aa11.7□□□□□ -0.54
CNIH1-203ENST00000553660 ALDH2P05091 517 aa11.7□□□□□ -0.54
CNIH1-203ENST00000553660 ZSCAN22P10073 491 aaPredicted RBP11.7□□□□□ -0.54
CNIH1-203ENST00000553660 IBSPP21815 317 aaPredicted RBP11.7□□□□□ -0.54
CNIH1-203ENST00000553660 TXLNAP40222 546 aa11.7□□□□□ -0.54
CNIH1-203ENST00000553660 GRIN1Q05586 938 aa11.7□□□□□ -0.54
CNIH1-203ENST00000553660 RNASELQ05823 741 aaKnown RBP11.7□□□□□ -0.54
CNIH1-203ENST00000553660 DSC1Q08554 894 aa11.7□□□□□ -0.54
CNIH1-203ENST00000553660 GIT2Q14161 759 aa11.7□□□□□ -0.54
CNIH1-203ENST00000553660 BMS1Q14692 1282 aaKnown RBP11.7□□□□□ -0.54
CNIH1-203ENST00000553660 ARSHQ5FYA8 562 aa11.7□□□□□ -0.54
CNIH1-203ENST00000553660 TMEM164Q5U3C3 297 aa11.7□□□□□ -0.54
CNIH1-203ENST00000553660 ZPBP2Q6X784 338 aa11.7□□□□□ -0.54
CNIH1-203ENST00000553660 DDX53Q86TM3 631 aaKnown RBP11.7□□□□□ -0.54
CNIH1-203ENST00000553660 GPR65Q8IYL9 337 aa11.7□□□□□ -0.54
CNIH1-203ENST00000553660 PGBD3Q8N328 593 aa11.7□□□□□ -0.54
CNIH1-203ENST00000553660 EFHBQ8N7U6 833 aa11.7□□□□□ -0.54
CNIH1-203ENST00000553660 LINC00301Q8NCQ3 95 aa11.7□□□□□ -0.54
CNIH1-203ENST00000553660 LARP4BQ92615 738 aaKnown RBP11.7□□□□□ -0.54
CNIH1-203ENST00000553660 RAD54LQ92698 747 aa11.7□□□□□ -0.54
CNIH1-203ENST00000553660 TMEM169Q96HH4 297 aa11.7□□□□□ -0.54
CNIH1-203ENST00000553660 IGSF21Q96ID5 467 aa11.7□□□□□ -0.54
CNIH1-203ENST00000553660 MRPL4Q9BYD3 311 aaKnown RBP11.7□□□□□ -0.54
CNIH1-203ENST00000553660 NUCKS1Q9H1E3 243 aaKnown RBP11.7□□□□□ -0.54
CNIH1-203ENST00000553660 PDZD7Q9H5P4 517 aa11.7□□□□□ -0.54
CNIH1-203ENST00000553660 RUBCNLQ9H714 662 aa11.7□□□□□ -0.54
CNIH1-203ENST00000553660 PTPRHQ9HD43 1115 aa11.7□□□□□ -0.54
CNIH1-203ENST00000553660 KMT5AQ9NQR1 393 aa11.7□□□□□ -0.54
CNIH1-203ENST00000553660 CCDC39Q9UFE4 941 aa11.7□□□□□ -0.54
CNIH1-203ENST00000553660 ARL5CA6NH57 179 aa11.69□□□□□ -0.54
CNIH1-203ENST00000553660 PLCG1P19174 1290 aa11.69□□□□□ -0.54
CNIH1-203ENST00000553660 PROZP22891 400 aa11.69□□□□□ -0.54
CNIH1-203ENST00000553660 HYAL1Q12794 435 aa11.69□□□□□ -0.54
CNIH1-203ENST00000553660 GRIK3Q13003 919 aa11.69□□□□□ -0.54
CNIH1-203ENST00000553660 LBRQ14739 615 aaKnown RBP11.69□□□□□ -0.54
CNIH1-203ENST00000553660 KARSQ15046 597 aaKnown RBP11.69□□□□□ -0.54
CNIH1-203ENST00000553660 ZRSR1Q15695 479 aaKnown RBP11.69□□□□□ -0.54
CNIH1-203ENST00000553660 SH3PXD2AQ5TCZ1 1133 aa11.69□□□□□ -0.54
CNIH1-203ENST00000553660 NT5DC1Q5TFE4 455 aa11.69□□□□□ -0.54
CNIH1-203ENST00000553660 ATF7IP2Q5U623 682 aa11.69□□□□□ -0.54
CNIH1-203ENST00000553660 FAM173BQ6P4H8 233 aa11.69□□□□□ -0.54
CNIH1-203ENST00000553660 TMEM184AQ6ZMB5 413 aa11.69□□□□□ -0.54
CNIH1-203ENST00000553660 GPR161Q8N6U8 529 aaKnown RBP11.69□□□□□ -0.54
CNIH1-203ENST00000553660 MRPL43Q8N983 215 aaKnown RBP11.69□□□□□ -0.54
CNIH1-203ENST00000553660 TMEM161BQ8NDZ6 487 aa11.69□□□□□ -0.54
CNIH1-203ENST00000553660 GSTCDQ8NEC7 633 aa11.69□□□□□ -0.54
CNIH1-203ENST00000553660 GAD1Q99259 594 aa11.69□□□□□ -0.54
CNIH1-203ENST00000553660 CRISPLD1Q9H336 500 aa11.69□□□□□ -0.54
CNIH1-203ENST00000553660 NXF3Q9H4D5 531 aaKnown RBP11.69□□□□□ -0.54
CNIH1-203ENST00000553660 PARVGQ9HBI0 331 aa11.69□□□□□ -0.54
CNIH1-203ENST00000553660 KIAA1671Q9BY89 1806 aa11.68□□□□□ -0.54
CNIH1-203ENST00000553660 CCDC169A6NNP5 214 aa11.68□□□□□ -0.54
CNIH1-203ENST00000553660 SPTLC2O15270 562 aa11.68□□□□□ -0.54
CNIH1-203ENST00000553660 ZC3H11AO75152 810 aaKnown RBP eCLIP11.68□□□□□ -0.54
CNIH1-203ENST00000553660 DDHD2O94830 711 aa11.68□□□□□ -0.54
CNIH1-203ENST00000553660 NPTXRO95502 500 aa11.68□□□□□ -0.54
CNIH1-203ENST00000553660 EFEMP2O95967 443 aa11.68□□□□□ -0.54
CNIH1-203ENST00000553660 F13A1P00488 732 aa11.68□□□□□ -0.54
CNIH1-203ENST00000553660 C1RP00736 705 aa11.68□□□□□ -0.54
CNIH1-203ENST00000553660 MAPTP10636 758 aaKnown RBP11.68□□□□□ -0.54
CNIH1-203ENST00000553660 MARCKSP29966 332 aaPredicted RBP11.68□□□□□ -0.54
CNIH1-203ENST00000553660 IRS1P35568 1242 aa11.68□□□□□ -0.54
CNIH1-203ENST00000553660 MLH1P40692 756 aa11.68□□□□□ -0.54
CNIH1-203ENST00000553660 NCKAP1LP55160 1127 aa11.68□□□□□ -0.54
CNIH1-203ENST00000553660 ERVFC1P60507 584 aa11.68□□□□□ -0.54
CNIH1-203ENST00000553660 ADAM15Q13444 863 aa11.68□□□□□ -0.54
CNIH1-203ENST00000553660 KCNC3Q14003 757 aa11.68□□□□□ -0.54
CNIH1-203ENST00000553660 SMC1AQ14683 1233 aaKnown RBP11.68□□□□□ -0.54
CNIH1-203ENST00000553660 CCDC73Q6ZRK6 1079 aa11.68□□□□□ -0.54
CNIH1-203ENST00000553660 ZNF280BQ86YH2 543 aa11.68□□□□□ -0.54
CNIH1-203ENST00000553660 COLGALT2Q8IYK4 626 aa11.68□□□□□ -0.54
CNIH1-203ENST00000553660 RASSF8Q8NHQ8 419 aa11.68□□□□□ -0.54
CNIH1-203ENST00000553660 KCNG4Q8TDN1 519 aa11.68□□□□□ -0.54
CNIH1-203ENST00000553660 LRRC15Q8TF66 581 aa11.68□□□□□ -0.54
CNIH1-203ENST00000553660 EPSTI1Q96J88 318 aa11.68□□□□□ -0.54
CNIH1-203ENST00000553660 FAM193BQ96PV7 902 aaPredicted RBP11.68□□□□□ -0.54
CNIH1-203ENST00000553660 ACO2Q99798 780 aaKnown RBP11.68□□□□□ -0.54
CNIH1-203ENST00000553660 TCF25Q9BQ70 676 aa11.68□□□□□ -0.54
CNIH1-203ENST00000553660 KIFC3Q9BVG8 833 aa11.68□□□□□ -0.54
CNIH1-203ENST00000553660 COL25A1Q9BXS0 654 aaPredicted RBP11.68□□□□□ -0.54
CNIH1-203ENST00000553660 ST6GALNAC4Q9H4F1 302 aa11.68□□□□□ -0.54
CNIH1-203ENST00000553660 CFAP45Q9UL16 551 aa11.68□□□□□ -0.54
CNIH1-203ENST00000553660 FAM50BQ9Y247 325 aa11.68□□□□□ -0.54
CNIH1-203ENST00000553660 INPP5FQ9Y2H2 1132 aa11.68□□□□□ -0.54
CNIH1-203ENST00000553660 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.68□□□□□ -0.54
CNIH1-203ENST00000553660 TTC28Q96AY4 2481 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms