RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 NOC3LQ8WTT2 800 aaKnown RBP16.08■□□□□ 0.16
MTHFD1-204ENST00000553405 CCDC127Q96BQ5 260 aa16.08■□□□□ 0.16
MTHFD1-204ENST00000553405 FAM212AQ96EL1 285 aa16.08■□□□□ 0.16
MTHFD1-204ENST00000553405 SLC38A7Q9NVC3 462 aa16.08■□□□□ 0.16
MTHFD1-204ENST00000553405 SIX4Q9UIU6 781 aa16.08■□□□□ 0.16
MTHFD1-204ENST00000553405 FRMD4BQ9Y2L6 1034 aa16.08■□□□□ 0.16
MTHFD1-204ENST00000553405 REV3LO60673 3130 aa16.08■□□□□ 0.16
MTHFD1-204ENST00000553405 PLXNA4Q9HCM2 1894 aa16.08■□□□□ 0.16
MTHFD1-204ENST00000553405 SCN1AP35498 2009 aa16.07■□□□□ 0.16
MTHFD1-204ENST00000553405 SPTBN5Q9NRC6 3674 aaKnown RBP16.07■□□□□ 0.16
MTHFD1-204ENST00000553405 TMEM265A0A087WTH1 108 aa16.07■□□□□ 0.16
MTHFD1-204ENST00000553405 TMEM189-UBE2V1I3L0A0 370 aa16.07■□□□□ 0.16
MTHFD1-204ENST00000553405 PIRO00625 290 aa16.07■□□□□ 0.16
MTHFD1-204ENST00000553405 TRIM49P0CI25 452 aa16.07■□□□□ 0.16
MTHFD1-204ENST00000553405 TRIM49CP0CI26 452 aa16.07■□□□□ 0.16
MTHFD1-204ENST00000553405 CLCNKBP51801 687 aa16.07■□□□□ 0.16
MTHFD1-204ENST00000553405 RNASELQ05823 741 aaKnown RBP16.07■□□□□ 0.16
MTHFD1-204ENST00000553405 PPP3CAQ08209 521 aa16.07■□□□□ 0.16
MTHFD1-204ENST00000553405 IQCB1Q15051 598 aa16.07■□□□□ 0.16
MTHFD1-204ENST00000553405 SURF1Q15526 300 aa16.07■□□□□ 0.16
MTHFD1-204ENST00000553405 CDKAL1Q5VV42 579 aa16.07■□□□□ 0.16
MTHFD1-204ENST00000553405 PPP2R2DQ66LE6 453 aa16.07■□□□□ 0.16
MTHFD1-204ENST00000553405 FRMD5Q7Z6J6 570 aa16.07■□□□□ 0.16
MTHFD1-204ENST00000553405 TRIM59Q8IWR1 403 aa16.07■□□□□ 0.16
MTHFD1-204ENST00000553405 DHX40Q8IX18 779 aaKnown RBP16.07■□□□□ 0.16
MTHFD1-204ENST00000553405 RABGGTAQ92696 567 aa16.07■□□□□ 0.16
MTHFD1-204ENST00000553405 SLC35C1Q96A29 364 aa16.07■□□□□ 0.16
MTHFD1-204ENST00000553405 ZNF558Q96NG5 402 aa16.07■□□□□ 0.16
MTHFD1-204ENST00000553405 TGS1Q96RS0 853 aaKnown RBP16.07■□□□□ 0.16
MTHFD1-204ENST00000553405 MTMR12Q9C0I1 747 aa16.07■□□□□ 0.16
MTHFD1-204ENST00000553405 COL4A4P53420 1690 aaPredicted RBP16.07■□□□□ 0.16
MTHFD1-204ENST00000553405 ATG2AQ2TAZ0 1938 aa16.07■□□□□ 0.16
MTHFD1-204ENST00000553405 NT5C1B-RDH14C9J2C7 533 aa16.06■□□□□ 0.16
MTHFD1-204ENST00000553405 IKBKBO14920 756 aa16.06■□□□□ 0.16
MTHFD1-204ENST00000553405 LPXNO60711 386 aa16.06■□□□□ 0.16
MTHFD1-204ENST00000553405 KIF4AO95239 1232 aa16.06■□□□□ 0.16
MTHFD1-204ENST00000553405 C4BPAP04003 597 aaKnown RBP16.06■□□□□ 0.16
MTHFD1-204ENST00000553405 DLATP10515 647 aaKnown RBP16.06■□□□□ 0.16
MTHFD1-204ENST00000553405 EPB41P11171 864 aaKnown RBP16.06■□□□□ 0.16
MTHFD1-204ENST00000553405 ZNF18P17022 549 aa16.06■□□□□ 0.16
MTHFD1-204ENST00000553405 RPL9P32969 192 aaKnown RBP16.06■□□□□ 0.16
MTHFD1-204ENST00000553405 AARSP49588 968 aaKnown RBP eCLIP16.06■□□□□ 0.16
MTHFD1-204ENST00000553405 VAMP7P51809 220 aa16.06■□□□□ 0.16
MTHFD1-204ENST00000553405 ZNF445P59923 1031 aa16.06■□□□□ 0.16
MTHFD1-204ENST00000553405 CAMK1Q14012 370 aa16.06■□□□□ 0.16
MTHFD1-204ENST00000553405 C9orf57Q5W0N0 161 aa16.06■□□□□ 0.16
MTHFD1-204ENST00000553405 IGSF21Q96ID5 467 aa16.06■□□□□ 0.16
MTHFD1-204ENST00000553405 UROC1Q96N76 676 aa16.06■□□□□ 0.16
MTHFD1-204ENST00000553405 SAMD11Q96NU1 681 aa16.06■□□□□ 0.16
MTHFD1-204ENST00000553405 PLVAPQ9BX97 442 aa16.06■□□□□ 0.16
MTHFD1-204ENST00000553405 THAP9Q9H5L6 903 aa16.06■□□□□ 0.16
MTHFD1-204ENST00000553405 SLC28A3Q9HAS3 691 aa16.06■□□□□ 0.16
MTHFD1-204ENST00000553405 SAMSN1Q9NSI8 373 aaKnown RBP16.06■□□□□ 0.16
MTHFD1-204ENST00000553405 DPP3Q9NY33 737 aa16.06■□□□□ 0.16
MTHFD1-204ENST00000553405 NFE2L3Q9Y4A8 694 aa16.06■□□□□ 0.16
MTHFD1-204ENST00000553405 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.06■□□□□ 0.16
MTHFD1-204ENST00000553405 PODXLO00592 558 aa16.05■□□□□ 0.16
MTHFD1-204ENST00000553405 SPTLC1O15269 473 aa16.05■□□□□ 0.16
MTHFD1-204ENST00000553405 VNN1O95497 513 aa16.05■□□□□ 0.16
MTHFD1-204ENST00000553405 RB1P06400 928 aa16.05■□□□□ 0.16
MTHFD1-204ENST00000553405 DNAJB1P25685 340 aa16.05■□□□□ 0.16
MTHFD1-204ENST00000553405 CTNNB1P35222 781 aa16.05■□□□□ 0.16
MTHFD1-204ENST00000553405 FXR1P51114 621 aaKnown RBP eCLIP16.05■□□□□ 0.16
MTHFD1-204ENST00000553405 TFAMQ00059 246 aaKnown RBP16.05■□□□□ 0.16
MTHFD1-204ENST00000553405 PLCB3Q01970 1234 aa16.05■□□□□ 0.16
MTHFD1-204ENST00000553405 MYL5Q02045 173 aa16.05■□□□□ 0.16
MTHFD1-204ENST00000553405 DUOXA2Q1HG44 320 aa16.05■□□□□ 0.16
MTHFD1-204ENST00000553405 ZACNQ401N2 412 aa16.05■□□□□ 0.16
MTHFD1-204ENST00000553405 TDRD10Q5VZ19 366 aaKnown RBP16.05■□□□□ 0.16
MTHFD1-204ENST00000553405 GPR153Q6NV75 609 aa16.05■□□□□ 0.16
MTHFD1-204ENST00000553405 TRAPPC11Q7Z392 1133 aa16.05■□□□□ 0.16
MTHFD1-204ENST00000553405 KLHL23Q8NBE8 558 aa16.05■□□□□ 0.16
MTHFD1-204ENST00000553405 CNOT6LQ96LI5 555 aaKnown RBP16.05■□□□□ 0.16
MTHFD1-204ENST00000553405 ZNF576Q9H609 170 aa16.05■□□□□ 0.16
MTHFD1-204ENST00000553405 ARMCX3Q9UH62 379 aaPredicted RBP16.05■□□□□ 0.16
MTHFD1-204ENST00000553405 MTUS1Q9ULD2 1270 aa16.05■□□□□ 0.16
MTHFD1-204ENST00000553405 PRG3Q9Y2Y8 225 aaPredicted RBP16.05■□□□□ 0.16
MTHFD1-204ENST00000553405 RWDD3Q9Y3V2 267 aa16.05■□□□□ 0.16
MTHFD1-204ENST00000553405 VWA8A3KMH1 1905 aa16.05■□□□□ 0.16
MTHFD1-204ENST00000553405 H3BNC9 293 aa16.04■□□□□ 0.16
MTHFD1-204ENST00000553405 FGF18O76093 207 aa16.04■□□□□ 0.16
MTHFD1-204ENST00000553405 GNA14O95837 355 aa16.04■□□□□ 0.16
MTHFD1-204ENST00000553405 ALDH2P05091 517 aa16.04■□□□□ 0.16
MTHFD1-204ENST00000553405 OR1G1P47890 313 aa16.04■□□□□ 0.16
MTHFD1-204ENST00000553405 DCLRE1AQ6PJP8 1040 aa16.04■□□□□ 0.16
MTHFD1-204ENST00000553405 LRSAM1Q6UWE0 723 aa16.04■□□□□ 0.16
MTHFD1-204ENST00000553405 SV2AQ7L0J3 742 aa16.04■□□□□ 0.16
MTHFD1-204ENST00000553405 APTXQ7Z2E3 356 aaKnown RBP16.04■□□□□ 0.16
MTHFD1-204ENST00000553405 BEST2Q8NFU1 509 aa16.04■□□□□ 0.16
MTHFD1-204ENST00000553405 SPPL3Q8TCT6 385 aa16.04■□□□□ 0.16
MTHFD1-204ENST00000553405 DDX27Q96GQ7 796 aaKnown RBP16.04■□□□□ 0.16
MTHFD1-204ENST00000553405 FAM193BQ96PV7 902 aaPredicted RBP16.04■□□□□ 0.16
MTHFD1-204ENST00000553405 FNBP1Q96RU3 617 aa16.04■□□□□ 0.16
MTHFD1-204ENST00000553405 XYLT2Q9H1B5 865 aa16.04■□□□□ 0.16
MTHFD1-204ENST00000553405 CERS4Q9HA82 394 aa16.04■□□□□ 0.16
MTHFD1-204ENST00000553405 METTL14Q9HCE5 456 aaKnown RBP16.04■□□□□ 0.16
MTHFD1-204ENST00000553405 FANCLQ9NW38 375 aa16.04■□□□□ 0.16
MTHFD1-204ENST00000553405 SPG21Q9NZD8 308 aa16.04■□□□□ 0.16
MTHFD1-204ENST00000553405 ITGA11Q9UKX5 1188 aa16.04■□□□□ 0.16
MTHFD1-204ENST00000553405 FAN1Q9Y2M0 1017 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms