RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 SYN3O14994 580 aa14.12□□□□□ -0.15
ACTN1-207ENST00000553290 MEFVO15553 781 aaPredicted RBP14.12□□□□□ -0.15
ACTN1-207ENST00000553290 XPOTO43592 962 aaKnown RBP14.12□□□□□ -0.15
ACTN1-207ENST00000553290 PPP6R2O75170 966 aa14.12□□□□□ -0.15
ACTN1-207ENST00000553290 HNRNPA1P09651 372 aaKnown RBP eCLIP14.12□□□□□ -0.15
ACTN1-207ENST00000553290 CXCL8P10145 99 aa14.12□□□□□ -0.15
ACTN1-207ENST00000553290 GAP43P17677 238 aa14.12□□□□□ -0.15
ACTN1-207ENST00000553290 NMT1P30419 496 aaKnown RBP14.12□□□□□ -0.15
ACTN1-207ENST00000553290 OR1D2P34982 312 aa14.12□□□□□ -0.15
ACTN1-207ENST00000553290 BRCC3P46736 316 aa14.12□□□□□ -0.15
ACTN1-207ENST00000553290 PPP2R3AQ06190 1150 aa14.12□□□□□ -0.15
ACTN1-207ENST00000553290 RTL10Q7L3V2 364 aa14.12□□□□□ -0.15
ACTN1-207ENST00000553290 DYMQ7RTS9 669 aa14.12□□□□□ -0.15
ACTN1-207ENST00000553290 LINC00301Q8NCQ3 95 aa14.12□□□□□ -0.15
ACTN1-207ENST00000553290 DDX12PQ92771 950 aa14.12□□□□□ -0.15
ACTN1-207ENST00000553290 PBXIP1Q96AQ6 731 aa14.12□□□□□ -0.15
ACTN1-207ENST00000553290 HVCN1Q96D96 273 aa14.12□□□□□ -0.15
ACTN1-207ENST00000553290 KCNH6Q9H252 994 aa14.12□□□□□ -0.15
ACTN1-207ENST00000553290 NUB1Q9Y5A7 615 aa14.12□□□□□ -0.15
ACTN1-207ENST00000553290 CLUHO75153 1309 aa14.12□□□□□ -0.15
ACTN1-207ENST00000553290 A0A0B4J269 797 aa14.11□□□□□ -0.15
ACTN1-207ENST00000553290 MYMKA6NI61 221 aa14.11□□□□□ -0.15
ACTN1-207ENST00000553290 I3L4J1 428 aa14.11□□□□□ -0.15
ACTN1-207ENST00000553290 SPTLC2O15270 562 aa14.11□□□□□ -0.15
ACTN1-207ENST00000553290 ADAM12O43184 909 aa14.11□□□□□ -0.15
ACTN1-207ENST00000553290 CYP3A5P20815 502 aa14.11□□□□□ -0.15
ACTN1-207ENST00000553290 HOXA9P31269 272 aa14.11□□□□□ -0.15
ACTN1-207ENST00000553290 TNFSF9P41273 254 aa14.11□□□□□ -0.15
ACTN1-207ENST00000553290 STAT6P42226 847 aa14.11□□□□□ -0.15
ACTN1-207ENST00000553290 UVSSAQ2YD98 709 aa14.11□□□□□ -0.15
ACTN1-207ENST00000553290 PPM1LQ5SGD2 360 aa14.11□□□□□ -0.15
ACTN1-207ENST00000553290 SLFN12LQ6IEE8 588 aa14.11□□□□□ -0.15
ACTN1-207ENST00000553290 ZNF720Q7Z2F6 126 aa14.11□□□□□ -0.15
ACTN1-207ENST00000553290 SFR1Q86XK3 245 aa14.11□□□□□ -0.15
ACTN1-207ENST00000553290 CD302Q8IX05 232 aa14.11□□□□□ -0.15
ACTN1-207ENST00000553290 KIF12Q96FN5 646 aa14.11□□□□□ -0.15
ACTN1-207ENST00000553290 MSTO1Q9BUK6 570 aa14.11□□□□□ -0.15
ACTN1-207ENST00000553290 RPF1Q9H9Y2 349 aaKnown RBP14.11□□□□□ -0.15
ACTN1-207ENST00000553290 UBQLN1Q9UMX0 589 aaKnown RBP14.11□□□□□ -0.15
ACTN1-207ENST00000553290 CDY1Q9Y6F8 540 aa14.11□□□□□ -0.15
ACTN1-207ENST00000553290 LACTBL1A8MY62 500 aa14.1□□□□□ -0.15
ACTN1-207ENST00000553290 H7C4K7 107 aa14.1□□□□□ -0.15
ACTN1-207ENST00000553290 FAM189A1O60320 539 aa14.1□□□□□ -0.15
ACTN1-207ENST00000553290 YEATS4O95619 227 aa14.1□□□□□ -0.15
ACTN1-207ENST00000553290 ASGR2P07307 311 aa14.1□□□□□ -0.15
ACTN1-207ENST00000553290 C8AP07357 584 aa14.1□□□□□ -0.15
ACTN1-207ENST00000553290 ADRB2P07550 413 aa14.1□□□□□ -0.15
ACTN1-207ENST00000553290 LRPAP1P30533 357 aa14.1□□□□□ -0.15
ACTN1-207ENST00000553290 GBP2P32456 591 aaPredicted RBP14.1□□□□□ -0.15
ACTN1-207ENST00000553290 MCM4P33991 863 aa14.1□□□□□ -0.15
ACTN1-207ENST00000553290 ZBTB6Q15916 424 aa14.1□□□□□ -0.15
ACTN1-207ENST00000553290 ENOX2Q16206 610 aaKnown RBP14.1□□□□□ -0.15
ACTN1-207ENST00000553290 ZC2HC1CQ53FD0 456 aaPredicted RBP14.1□□□□□ -0.15
ACTN1-207ENST00000553290 VARS2Q5ST30 1063 aaKnown RBP14.1□□□□□ -0.15
ACTN1-207ENST00000553290 AXDND1Q5T1B0 1012 aaPredicted RBP14.1□□□□□ -0.15
ACTN1-207ENST00000553290 SLC39A4Q6P5W5 647 aa14.1□□□□□ -0.15
ACTN1-207ENST00000553290 APPL2Q8NEU8 664 aa14.1□□□□□ -0.15
ACTN1-207ENST00000553290 DNAJC19Q96DA6 116 aa14.1□□□□□ -0.15
ACTN1-207ENST00000553290 FAM122AQ96E09 287 aa14.1□□□□□ -0.15
ACTN1-207ENST00000553290 ASIC4Q96FT7 647 aa14.1□□□□□ -0.15
ACTN1-207ENST00000553290 SUSD3Q96L08 255 aa14.1□□□□□ -0.15
ACTN1-207ENST00000553290 PANK2Q9BZ23 570 aa14.1□□□□□ -0.15
ACTN1-207ENST00000553290 MRPL44Q9H9J2 332 aaKnown RBP14.1□□□□□ -0.15
ACTN1-207ENST00000553290 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.1□□□□□ -0.15
ACTN1-207ENST00000553290 TFIP11Q9UBB9 837 aaKnown RBP14.1□□□□□ -0.15
ACTN1-207ENST00000553290 TUBGCP4Q9UGJ1 667 aa14.1□□□□□ -0.15
ACTN1-207ENST00000553290 CPSF3Q9UKF6 684 aaKnown RBP14.1□□□□□ -0.15
ACTN1-207ENST00000553290 STYXL1Q9Y6J8 313 aa14.1□□□□□ -0.15
ACTN1-207ENST00000553290 A0A087X0B3 334 aa14.09□□□□□ -0.15
ACTN1-207ENST00000553290 N4BP1O75113 896 aaKnown RBP14.09□□□□□ -0.15
ACTN1-207ENST00000553290 XYLBO75191 536 aa14.09□□□□□ -0.15
ACTN1-207ENST00000553290 PPP1R37O75864 691 aa14.09□□□□□ -0.15
ACTN1-207ENST00000553290 POU2F2P09086 479 aa14.09□□□□□ -0.15
ACTN1-207ENST00000553290 ZSCAN22P10073 491 aaPredicted RBP14.09□□□□□ -0.15
ACTN1-207ENST00000553290 PLA2G5P39877 138 aa14.09□□□□□ -0.15
ACTN1-207ENST00000553290 POU5F1Q01860 360 aaKnown RBP14.09□□□□□ -0.15
ACTN1-207ENST00000553290 POSTNQ15063 836 aa14.09□□□□□ -0.15
ACTN1-207ENST00000553290 ADALQ6DHV7 355 aa14.09□□□□□ -0.15
ACTN1-207ENST00000553290 SLC8B1Q6J4K2 584 aa14.09□□□□□ -0.15
ACTN1-207ENST00000553290 RSPO2Q6UXX9 243 aaPredicted RBP14.09□□□□□ -0.15
ACTN1-207ENST00000553290 SUGP1Q8IWZ8 645 aaKnown RBP14.09□□□□□ -0.15
ACTN1-207ENST00000553290 FBXL6Q8N531 539 aa14.09□□□□□ -0.15
ACTN1-207ENST00000553290 ZNF461Q8TAF7 563 aa14.09□□□□□ -0.15
ACTN1-207ENST00000553290 STRA6Q9BX79 667 aa14.09□□□□□ -0.15
ACTN1-207ENST00000553290 LRRC27Q9C0I9 530 aa14.09□□□□□ -0.15
ACTN1-207ENST00000553290 OLFML3Q9NRN5 406 aa14.09□□□□□ -0.15
ACTN1-207ENST00000553290 IGSF9Q9P2J2 1179 aa14.09□□□□□ -0.15
ACTN1-207ENST00000553290 EPS15L1Q9UBC2 864 aa14.09□□□□□ -0.15
ACTN1-207ENST00000553290 AGO2Q9UKV8 859 aaKnown RBP14.09□□□□□ -0.15
ACTN1-207ENST00000553290 EXOC7Q9UPT5 735 aa14.09□□□□□ -0.15
ACTN1-207ENST00000553290 PCDHB13Q9Y5F0 798 aa14.09□□□□□ -0.15
ACTN1-207ENST00000553290 ANKRD63C9JTQ0 380 aa14.08□□□□□ -0.16
ACTN1-207ENST00000553290 TBC1D4O60343 1298 aa14.08□□□□□ -0.16
ACTN1-207ENST00000553290 CUTAO60888 179 aa14.08□□□□□ -0.16
ACTN1-207ENST00000553290 F13A1P00488 732 aa14.08□□□□□ -0.16
ACTN1-207ENST00000553290 IDEP14735 1019 aa14.08□□□□□ -0.16
ACTN1-207ENST00000553290 PAX3P23760 479 aa14.08□□□□□ -0.16
ACTN1-207ENST00000553290 SPAG1Q07617 926 aa14.08□□□□□ -0.16
ACTN1-207ENST00000553290 TDGQ13569 410 aa14.08□□□□□ -0.16
ACTN1-207ENST00000553290 ALCAMQ13740 583 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms