RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 AXDND1Q5T1B0 1012 aaPredicted RBP17.33■□□□□ 0.36
CDK4-215ENST00000553237 ANKS3Q6ZW76 656 aa17.33■□□□□ 0.36
CDK4-215ENST00000553237 GRASPQ7Z6J2 395 aaPredicted RBP17.33■□□□□ 0.36
CDK4-215ENST00000553237 KRI1Q8N9T8 703 aaKnown RBP17.33■□□□□ 0.36
CDK4-215ENST00000553237 FIZ1Q96SL8 496 aa17.33■□□□□ 0.36
CDK4-215ENST00000553237 ZSCAN16Q9H4T2 348 aaPredicted RBP17.33■□□□□ 0.36
CDK4-215ENST00000553237 POLIQ9UNA4 740 aa17.33■□□□□ 0.36
CDK4-215ENST00000553237 BACE2Q9Y5Z0 518 aa17.33■□□□□ 0.36
CDK4-215ENST00000553237 VWA8A3KMH1 1905 aa17.33■□□□□ 0.36
CDK4-215ENST00000553237 DENND4AQ7Z401 1863 aa17.33■□□□□ 0.36
CDK4-215ENST00000553237 ZDBF2Q9HCK1 2354 aa17.32■□□□□ 0.36
CDK4-215ENST00000553237 LACTBL1A8MY62 500 aa17.32■□□□□ 0.36
CDK4-215ENST00000553237 CCL16O15467 120 aa17.32■□□□□ 0.36
CDK4-215ENST00000553237 PAPLNO95428 1278 aa17.32■□□□□ 0.36
CDK4-215ENST00000553237 TXLNAP40222 546 aa17.32■□□□□ 0.36
CDK4-215ENST00000553237 VCPP55072 806 aaKnown RBP17.32■□□□□ 0.36
CDK4-215ENST00000553237 ARPP19P56211 112 aa17.32■□□□□ 0.36
CDK4-215ENST00000553237 TDGQ13569 410 aa17.32■□□□□ 0.36
CDK4-215ENST00000553237 SLC39A14Q15043 492 aa17.32■□□□□ 0.36
CDK4-215ENST00000553237 VARS2Q5ST30 1063 aaKnown RBP17.32■□□□□ 0.36
CDK4-215ENST00000553237 FOXD4L5Q5VV16 416 aaPredicted RBP17.32■□□□□ 0.36
CDK4-215ENST00000553237 GET4Q7L5D6 327 aaPredicted RBP17.32■□□□□ 0.36
CDK4-215ENST00000553237 ST13P5Q8NFI4 369 aaPredicted RBP17.32■□□□□ 0.36
CDK4-215ENST00000553237 SLC7A14Q8TBB6 771 aa17.32■□□□□ 0.36
CDK4-215ENST00000553237 RSAD2Q8WXG1 361 aa17.32■□□□□ 0.36
CDK4-215ENST00000553237 FOXD4L4Q8WXT5 416 aaPredicted RBP17.32■□□□□ 0.36
CDK4-215ENST00000553237 KCNN1Q92952 543 aa17.32■□□□□ 0.36
CDK4-215ENST00000553237 FAM212AQ96EL1 285 aa17.32■□□□□ 0.36
CDK4-215ENST00000553237 KIF12Q96FN5 646 aa17.32■□□□□ 0.36
CDK4-215ENST00000553237 PLEKHA5Q9HAU0 1116 aa17.32■□□□□ 0.36
CDK4-215ENST00000553237 STK17AQ9UEE5 414 aa17.32■□□□□ 0.36
CDK4-215ENST00000553237 MTCL1Q9Y4B5 1905 aaKnown RBP17.31■□□□□ 0.36
CDK4-215ENST00000553237 ZNF318Q5VUA4 2279 aa17.31■□□□□ 0.36
CDK4-215ENST00000553237 TTC26A0AVF1 554 aa17.31■□□□□ 0.36
CDK4-215ENST00000553237 MYMKA6NI61 221 aa17.31■□□□□ 0.36
CDK4-215ENST00000553237 ANKRD63C9JTQ0 380 aa17.31■□□□□ 0.36
CDK4-215ENST00000553237 OGTO15294 1046 aa17.31■□□□□ 0.36
CDK4-215ENST00000553237 PIGRP01833 764 aa17.31■□□□□ 0.36
CDK4-215ENST00000553237 HNRNPA1P09651 372 aaKnown RBP eCLIP17.31■□□□□ 0.36
CDK4-215ENST00000553237 MCM4P33991 863 aa17.31■□□□□ 0.36
CDK4-215ENST00000553237 GUCY2FP51841 1108 aa17.31■□□□□ 0.36
CDK4-215ENST00000553237 GTF2BQ00403 316 aa17.31■□□□□ 0.36
CDK4-215ENST00000553237 ENOX2Q16206 610 aaKnown RBP17.31■□□□□ 0.36
CDK4-215ENST00000553237 SLC39A4Q6P5W5 647 aa17.31■□□□□ 0.36
CDK4-215ENST00000553237 SV2BQ7L1I2 683 aa17.31■□□□□ 0.36
CDK4-215ENST00000553237 SFR1Q86XK3 245 aa17.31■□□□□ 0.36
CDK4-215ENST00000553237 DDX12PQ92771 950 aa17.31■□□□□ 0.36
CDK4-215ENST00000553237 MSTO1Q9BUK6 570 aa17.31■□□□□ 0.36
CDK4-215ENST00000553237 RPF1Q9H9Y2 349 aaKnown RBP17.31■□□□□ 0.36
CDK4-215ENST00000553237 TFIP11Q9UBB9 837 aaKnown RBP17.31■□□□□ 0.36
CDK4-215ENST00000553237 CITO14578 2027 aa17.31■□□□□ 0.36
CDK4-215ENST00000553237 A0A0B4J269 797 aa17.3■□□□□ 0.36
CDK4-215ENST00000553237 TISP43B9A030 160 aa17.3■□□□□ 0.36
CDK4-215ENST00000553237 SYN3O14994 580 aa17.3■□□□□ 0.36
CDK4-215ENST00000553237 HSP90AA1P07900 732 aaKnown RBP17.3■□□□□ 0.36
CDK4-215ENST00000553237 SCP2P22307 547 aa17.3■□□□□ 0.36
CDK4-215ENST00000553237 FSHRP23945 695 aa17.3■□□□□ 0.36
CDK4-215ENST00000553237 AVPR2P30518 371 aa17.3■□□□□ 0.36
CDK4-215ENST00000553237 PPP2R3AQ06190 1150 aa17.3■□□□□ 0.36
CDK4-215ENST00000553237 STK38Q15208 465 aa17.3■□□□□ 0.36
CDK4-215ENST00000553237 MAP4K3Q8IVH8 894 aa17.3■□□□□ 0.36
CDK4-215ENST00000553237 SUSD3Q96L08 255 aa17.3■□□□□ 0.36
CDK4-215ENST00000553237 KCNH6Q9H252 994 aa17.3■□□□□ 0.36
CDK4-215ENST00000553237 IKZF4Q9H2S9 585 aa17.3■□□□□ 0.36
CDK4-215ENST00000553237 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.3■□□□□ 0.36
CDK4-215ENST00000553237 TBC1D7Q9P0N9 293 aa17.3■□□□□ 0.36
CDK4-215ENST00000553237 IGSF9Q9P2J2 1179 aa17.3■□□□□ 0.36
CDK4-215ENST00000553237 EPS15L1Q9UBC2 864 aa17.3■□□□□ 0.36
CDK4-215ENST00000553237 A0A087X0B3 334 aa17.29■□□□□ 0.36
CDK4-215ENST00000553237 NARSO43776 548 aaKnown RBP17.29■□□□□ 0.36
CDK4-215ENST00000553237 FAM189A1O60320 539 aa17.29■□□□□ 0.36
CDK4-215ENST00000553237 XYLBO75191 536 aa17.29■□□□□ 0.36
CDK4-215ENST00000553237 LAMP2P13473 410 aa17.29■□□□□ 0.36
CDK4-215ENST00000553237 ACOT2P49753 483 aa17.29■□□□□ 0.36
CDK4-215ENST00000553237 ROR1Q01973 937 aa17.29■□□□□ 0.36
CDK4-215ENST00000553237 ZBTB6Q15916 424 aa17.29■□□□□ 0.36
CDK4-215ENST00000553237 KYAT1Q16773 422 aa17.29■□□□□ 0.36
CDK4-215ENST00000553237 UVSSAQ2YD98 709 aa17.29■□□□□ 0.36
CDK4-215ENST00000553237 CTXN3Q4LDR2 81 aa17.29■□□□□ 0.36
CDK4-215ENST00000553237 CCDC73Q6ZRK6 1079 aa17.29■□□□□ 0.36
CDK4-215ENST00000553237 ZNF720Q7Z2F6 126 aa17.29■□□□□ 0.36
CDK4-215ENST00000553237 PRSS33Q8NF86 280 aa17.29■□□□□ 0.36
CDK4-215ENST00000553237 HCFC1R1Q9NWW0 138 aa17.29■□□□□ 0.36
CDK4-215ENST00000553237 FBXL5Q9UKA1 691 aa17.29■□□□□ 0.36
CDK4-215ENST00000553237 UBQLN1Q9UMX0 589 aaKnown RBP17.29■□□□□ 0.36
CDK4-215ENST00000553237 WDR27A2RRH5 827 aa17.28■□□□□ 0.36
CDK4-215ENST00000553237 H7C4K7 107 aa17.28■□□□□ 0.36
CDK4-215ENST00000553237 TBC1D4O60343 1298 aa17.28■□□□□ 0.36
CDK4-215ENST00000553237 LRPAP1P30533 357 aa17.28■□□□□ 0.36
CDK4-215ENST00000553237 HOXA9P31269 272 aa17.28■□□□□ 0.36
CDK4-215ENST00000553237 ELF1P32519 619 aa17.28■□□□□ 0.36
CDK4-215ENST00000553237 STAT6P42226 847 aa17.28■□□□□ 0.36
CDK4-215ENST00000553237 NASPP49321 788 aaPredicted RBP17.28■□□□□ 0.36
CDK4-215ENST00000553237 NHLH1Q02575 133 aa17.28■□□□□ 0.36
CDK4-215ENST00000553237 MRPL58Q14197 206 aaKnown RBP17.28■□□□□ 0.36
CDK4-215ENST00000553237 FOXD4L6Q3SYB3 417 aaPredicted RBP17.28■□□□□ 0.36
CDK4-215ENST00000553237 ADALQ6DHV7 355 aa17.28■□□□□ 0.36
CDK4-215ENST00000553237 SLC8B1Q6J4K2 584 aa17.28■□□□□ 0.36
CDK4-215ENST00000553237 FOXD4L3Q6VB84 417 aaPredicted RBP17.28■□□□□ 0.36
CDK4-215ENST00000553237 PDILTQ8N807 584 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms