RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 MTMR9Q96QG7 549 aa9.55□□□□□ -0.88
TMEM116-217ENST00000552801 FZD8Q9H461 694 aa9.55□□□□□ -0.88
TMEM116-217ENST00000552801 SLC2A4RGQ9NR83 387 aa9.55□□□□□ -0.88
TMEM116-217ENST00000552801 CACNG4Q9UBN1 327 aa9.55□□□□□ -0.88
TMEM116-217ENST00000552801 LRWD1Q9UFC0 647 aa9.55□□□□□ -0.88
TMEM116-217ENST00000552801 MRPS17Q9Y2R5 130 aaKnown RBP9.55□□□□□ -0.88
TMEM116-217ENST00000552801 MRPS23Q9Y3D9 190 aaKnown RBP9.55□□□□□ -0.88
TMEM116-217ENST00000552801 R4GN57 208 aa9.55□□□□□ -0.88
TMEM116-217ENST00000552801 MIA3Q5JRA6 1907 aa9.55□□□□□ -0.88
TMEM116-217ENST00000552801 MYH15Q9Y2K3 1946 aa9.54□□□□□ -0.88
TMEM116-217ENST00000552801 ANHXE9PGG2 379 aa9.54□□□□□ -0.88
TMEM116-217ENST00000552801 H7C4K7 107 aa9.54□□□□□ -0.88
TMEM116-217ENST00000552801 SPATA31C1P0DKV0 1188 aa9.54□□□□□ -0.88
TMEM116-217ENST00000552801 MUTP22033 750 aa9.54□□□□□ -0.88
TMEM116-217ENST00000552801 MATR3P43243 847 aaKnown RBP eCLIP9.54□□□□□ -0.884e-7■■□□□ 13.3
TMEM116-217ENST00000552801 ARPP19P56211 112 aa9.54□□□□□ -0.88
TMEM116-217ENST00000552801 HMGN5P82970 282 aaKnown RBP9.54□□□□□ -0.88
TMEM116-217ENST00000552801 PRKCQQ04759 706 aa9.54□□□□□ -0.88
TMEM116-217ENST00000552801 SNW1Q13573 536 aaKnown RBP9.54□□□□□ -0.88
TMEM116-217ENST00000552801 MLF2Q15773 248 aaPredicted RBP9.54□□□□□ -0.88
TMEM116-217ENST00000552801 ZNF568Q3ZCX4 644 aa9.54□□□□□ -0.88
TMEM116-217ENST00000552801 GLRA4Q5JXX5 417 aa9.54□□□□□ -0.88
TMEM116-217ENST00000552801 TTC38Q5R3I4 469 aa9.54□□□□□ -0.88
TMEM116-217ENST00000552801 KRT79Q5XKE5 535 aa9.54□□□□□ -0.88
TMEM116-217ENST00000552801 LILRA6Q6PI73 481 aa9.54□□□□□ -0.88
TMEM116-217ENST00000552801 RTL10Q7L3V2 364 aa9.54□□□□□ -0.88
TMEM116-217ENST00000552801 KRI1Q8N9T8 703 aaKnown RBP9.54□□□□□ -0.88
TMEM116-217ENST00000552801 GSTCDQ8NEC7 633 aa9.54□□□□□ -0.88
TMEM116-217ENST00000552801 PJA1Q8NG27 643 aa9.54□□□□□ -0.88
TMEM116-217ENST00000552801 LNX1Q8TBB1 728 aaPredicted RBP9.54□□□□□ -0.88
TMEM116-217ENST00000552801 ATRIPQ8WXE1 791 aa9.54□□□□□ -0.88
TMEM116-217ENST00000552801 FGF13Q92913 245 aa9.54□□□□□ -0.88
TMEM116-217ENST00000552801 CLSTN3Q9BQT9 956 aa9.54□□□□□ -0.88
TMEM116-217ENST00000552801 PAAF1Q9BRP4 392 aa9.54□□□□□ -0.88
TMEM116-217ENST00000552801 MRPL4Q9BYD3 311 aaKnown RBP9.54□□□□□ -0.88
TMEM116-217ENST00000552801 TMEM60Q9H2L4 133 aa9.54□□□□□ -0.88
TMEM116-217ENST00000552801 BHMT2Q9H2M3 363 aa9.54□□□□□ -0.88
TMEM116-217ENST00000552801 FOXP1Q9H334 677 aaPredicted RBP9.54□□□□□ -0.88
TMEM116-217ENST00000552801 NCDNQ9UBB6 729 aa9.54□□□□□ -0.88
TMEM116-217ENST00000552801 DNM3Q9UQ16 869 aa9.54□□□□□ -0.88
TMEM116-217ENST00000552801 KIF3AQ9Y496 699 aa9.54□□□□□ -0.88
TMEM116-217ENST00000552801 CDY1Q9Y6F8 540 aa9.54□□□□□ -0.88
TMEM116-217ENST00000552801 PTPRZ1P23471 2315 aaPredicted RBP9.54□□□□□ -0.88
TMEM116-217ENST00000552801 DOCK8Q8NF50 2099 aa9.54□□□□□ -0.88
TMEM116-217ENST00000552801 CACNA1HO95180 2353 aa9.54□□□□□ -0.88
TMEM116-217ENST00000552801 ZFHX2Q9C0A1 2572 aaPredicted RBP9.54□□□□□ -0.88
TMEM116-217ENST00000552801 KANSL1LA0AUZ9 987 aa9.53□□□□□ -0.88
TMEM116-217ENST00000552801 RCCD1A6NED2 376 aa9.53□□□□□ -0.88
TMEM116-217ENST00000552801 LARGE1O95461 756 aa9.53□□□□□ -0.88
TMEM116-217ENST00000552801 HARSP12081 509 aaKnown RBP9.53□□□□□ -0.88
TMEM116-217ENST00000552801 MARCKSP29966 332 aaPredicted RBP9.53□□□□□ -0.88
TMEM116-217ENST00000552801 MAGEA9P43362 315 aa9.53□□□□□ -0.88
TMEM116-217ENST00000552801 CLCNKBP51801 687 aa9.53□□□□□ -0.88
TMEM116-217ENST00000552801 OSTNP61366 133 aa9.53□□□□□ -0.88
TMEM116-217ENST00000552801 GPC5P78333 572 aa9.53□□□□□ -0.88
TMEM116-217ENST00000552801 NTHL1P78549 312 aa9.53□□□□□ -0.88
TMEM116-217ENST00000552801 STRN3Q13033 797 aa9.53□□□□□ -0.88
TMEM116-217ENST00000552801 RAB33AQ14088 237 aa9.53□□□□□ -0.88
TMEM116-217ENST00000552801 PPP2R5DQ14738 602 aa9.53□□□□□ -0.88
TMEM116-217ENST00000552801 ZRSR1Q15695 479 aaKnown RBP9.53□□□□□ -0.88
TMEM116-217ENST00000552801 SLC44A4Q53GD3 710 aa9.53□□□□□ -0.88
TMEM116-217ENST00000552801 IQCEQ6IPM2 695 aa9.53□□□□□ -0.88
TMEM116-217ENST00000552801 PARM1Q6UWI2 310 aa9.53□□□□□ -0.88
TMEM116-217ENST00000552801 CCDC83Q8IWF9 413 aa9.53□□□□□ -0.88
TMEM116-217ENST00000552801 KIAA2013Q8IYS2 634 aa9.53□□□□□ -0.88
TMEM116-217ENST00000552801 SNX29Q8TEQ0 813 aa9.53□□□□□ -0.88
TMEM116-217ENST00000552801 ING5Q8WYH8 240 aa9.53□□□□□ -0.88
TMEM116-217ENST00000552801 DRC1Q96MC2 740 aa9.53□□□□□ -0.88
TMEM116-217ENST00000552801 KXD1Q9BQD3 176 aa9.53□□□□□ -0.88
TMEM116-217ENST00000552801 LLPHQ9BRT6 129 aaKnown RBP9.53□□□□□ -0.88
TMEM116-217ENST00000552801 KIFC3Q9BVG8 833 aa9.53□□□□□ -0.88
TMEM116-217ENST00000552801 FOXQ1Q9C009 403 aa9.53□□□□□ -0.88
TMEM116-217ENST00000552801 KMT5AQ9NQR1 393 aa9.53□□□□□ -0.88
TMEM116-217ENST00000552801 MTRRQ9UBK8 725 aa9.53□□□□□ -0.88
TMEM116-217ENST00000552801 KCNG1Q9UIX4 513 aa9.53□□□□□ -0.88
TMEM116-217ENST00000552801 KCNH3Q9ULD8 1083 aa9.53□□□□□ -0.88
TMEM116-217ENST00000552801 LIMCH1Q9UPQ0 1083 aa9.53□□□□□ -0.88
TMEM116-217ENST00000552801 KIAA1024Q9UPX6 916 aa9.53□□□□□ -0.88
TMEM116-217ENST00000552801 FAM170BA6NMN3 283 aa9.52□□□□□ -0.88
TMEM116-217ENST00000552801 TMEM189-UBE2V1I3L0A0 370 aa9.52□□□□□ -0.88
TMEM116-217ENST00000552801 PTGESO14684 152 aa9.52□□□□□ -0.88
TMEM116-217ENST00000552801 ZNF197O14709 1029 aa9.52□□□□□ -0.88
TMEM116-217ENST00000552801 EFEMP2O95967 443 aa9.52□□□□□ -0.88
TMEM116-217ENST00000552801 SP9P0CG40 484 aa9.52□□□□□ -0.88
TMEM116-217ENST00000552801 PTPN2P17706 415 aa9.52□□□□□ -0.88
TMEM116-217ENST00000552801 FGFR3P22607 806 aa9.52□□□□□ -0.88
TMEM116-217ENST00000552801 TRAPPC10P48553 1259 aa9.52□□□□□ -0.88
TMEM116-217ENST00000552801 SMTNP53814 917 aa9.52□□□□□ -0.88
TMEM116-217ENST00000552801 PEX3P56589 373 aa9.52□□□□□ -0.88
TMEM116-217ENST00000552801 ZBTB41Q5SVQ8 909 aa9.52□□□□□ -0.88
TMEM116-217ENST00000552801 SWT1Q5T5J6 900 aaKnown RBP9.52□□□□□ -0.88
TMEM116-217ENST00000552801 CYP4A22Q5TCH4 519 aa9.52□□□□□ -0.88
TMEM116-217ENST00000552801 RSPO2Q6UXX9 243 aaPredicted RBP9.52□□□□□ -0.88
TMEM116-217ENST00000552801 PDZD4Q76G19 769 aaPredicted RBP9.52□□□□□ -0.88
TMEM116-217ENST00000552801 METTL3Q86U44 580 aaKnown RBP9.52□□□□□ -0.88
TMEM116-217ENST00000552801 ITFG1Q8TB96 612 aa9.52□□□□□ -0.88
TMEM116-217ENST00000552801 BSNDQ8WZ55 320 aa9.52□□□□□ -0.88
TMEM116-217ENST00000552801 RUBCNQ92622 972 aa9.52□□□□□ -0.88
TMEM116-217ENST00000552801 FGF14Q92915 247 aa9.52□□□□□ -0.88
TMEM116-217ENST00000552801 SNX21Q969T3 373 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms