RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 ARL8BQ9NVJ2 186 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 NOCTQ9UK39 431 aaKnown RBP5.16□□□□□ -1.58
LIMA1-214ENST00000552783 ADGRA3Q8IWK6 1321 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 POC1B-GALNT4F8VUJ3 575 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 ZBTB5O15062 677 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 MSH4O15457 936 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 CYP3A4P08684 503 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 AMPD1P23109 780 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 CALRP27797 417 aaKnown RBP5.16□□□□□ -1.58
LIMA1-214ENST00000552783 ADCY8P40145 1251 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 SSR1P43307 286 aaKnown RBP5.16□□□□□ -1.58
LIMA1-214ENST00000552783 ARHGAP4P98171 946 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 MYL7Q01449 175 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 CCDC15Q0P6D6 951 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 LAMB3Q13751 1172 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 SLC10A5Q5PT55 438 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 MTHFD1LQ6UB35 978 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 CYFIP1Q7L576 1253 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 HS2ST1Q7LGA3 356 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 TEX9Q8N6V9 391 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 ZNF564Q8TBZ8 553 aaPredicted RBP5.16□□□□□ -1.58
LIMA1-214ENST00000552783 EPS8L1Q8TE68 723 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 CRYGNQ8WXF5 182 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 EZH1Q92800 747 aaPredicted RBP5.16□□□□□ -1.58
LIMA1-214ENST00000552783 KREMEN1Q96MU8 473 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 KLF6Q99612 283 aaPredicted RBP5.16□□□□□ -1.58
LIMA1-214ENST00000552783 MAK16Q9BXY0 300 aaKnown RBP5.16□□□□□ -1.58
LIMA1-214ENST00000552783 STMN4Q9H169 189 aaPredicted RBP5.16□□□□□ -1.58
LIMA1-214ENST00000552783 TDRD3Q9H7E2 651 aaKnown RBP5.16□□□□□ -1.58
LIMA1-214ENST00000552783 METTL14Q9HCE5 456 aaKnown RBP5.16□□□□□ -1.58
LIMA1-214ENST00000552783 KIAA1586Q9HCI6 787 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 AGPAT3Q9NRZ7 376 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 KRT82Q9NSB4 513 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 TXLNGQ9NUQ3 528 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 VAV3Q9UKW4 847 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 NEU2Q9Y3R4 380 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 LAMB2P55268 1798 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 MYH11P35749 1972 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 EMSYQ7Z589 1322 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 FAM47DPA6NHR8 397 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 GOLGA8RI6L899 631 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 CAPN9O14815 690 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 NVLO15381 856 aaKnown RBP5.16□□□□□ -1.58
LIMA1-214ENST00000552783 SLC16A3O15427 465 aaKnown RBP5.16□□□□□ -1.58
LIMA1-214ENST00000552783 SORBS3O60504 671 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 EDF1O60869 148 aaKnown RBP5.16□□□□□ -1.58
LIMA1-214ENST00000552783 BBOX1O75936 387 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 ACADSP16219 412 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 ANXA13P27216 316 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 SMARCA1P28370 1054 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 ALDH3A1P30838 453 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 CPA2P48052 419 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 MRPS35P82673 323 aaKnown RBP5.16□□□□□ -1.58
LIMA1-214ENST00000552783 FMO1Q01740 532 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 PPP2R5EQ16537 467 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 SGSM1Q2NKQ1 1148 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 RINLQ6ZS11 566 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 CLNKQ7Z7G1 428 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 TRABD2AQ86V40 505 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 ZC3H18Q86VM9 953 aaKnown RBP5.16□□□□□ -1.58
LIMA1-214ENST00000552783 FBXO11Q86XK2 927 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 MFN1Q8IWA4 741 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 SEPT12Q8IYM1 358 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 ZNF276Q8N554 614 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 RBBP8NLQ8NC74 664 aaPredicted RBP5.16□□□□□ -1.58
LIMA1-214ENST00000552783 SEMA4DQ92854 862 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 RUNDC3BQ96NL0 473 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 RAB3IPQ96QF0 476 aaPredicted RBP5.16□□□□□ -1.58
LIMA1-214ENST00000552783 EIF2AK1Q9BQI3 630 aaKnown RBP5.16□□□□□ -1.58
LIMA1-214ENST00000552783 FHDC1Q9C0D6 1143 aaPredicted RBP5.16□□□□□ -1.58
LIMA1-214ENST00000552783 CYLDQ9NQC7 956 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 LRRC4BQ9NT99 713 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 KLHL11Q9NVR0 708 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 NKIRAS1Q9NYS0 192 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 LMCD1Q9NZU5 365 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 PARP2Q9UGN5 583 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 ANAPC5Q9UJX4 755 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 STARD13Q9Y3M8 1113 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 PCDHAC2Q9Y5I4 1007 aa5.16□□□□□ -1.58
LIMA1-214ENST00000552783 ATP8B3O60423 1300 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 SPATA31A6Q5VVP1 1343 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 NHSQ6T4R5 1651 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 KAT6AQ92794 2004 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 CFAP69A5D8W1 941 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 MIF4GDA9UHW6 222 aaKnown RBP5.15□□□□□ -1.58
LIMA1-214ENST00000552783 FSCN2O14926 492 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 EXOC3O60645 756 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 ZBED4O75132 1171 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 EYA4O95677 639 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 GH2P01242 217 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 BMP3P12645 472 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 TCF4P15884 667 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 ADRA1DP25100 572 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 RPL13P26373 211 aaKnown RBP5.15□□□□□ -1.58
LIMA1-214ENST00000552783 PIK3CAP42336 1068 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 GCLCP48506 637 aaPredicted RBP5.15□□□□□ -1.58
LIMA1-214ENST00000552783 CACNA2D1P54289 1103 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 HADHBP55084 474 aaKnown RBP5.15□□□□□ -1.58
LIMA1-214ENST00000552783 STRN3Q13033 797 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 MTMR2Q13614 643 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms