RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 SCARA3Q6AZY7 606 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 LLGL2Q6P1M3 1020 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 RSRC2Q7L4I2 434 aaKnown RBP8.76□□□□□ -1.01
CHPT1-208ENST00000552215 TRIM59Q8IWR1 403 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 SPIRE2Q8WWL2 714 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 SEMA4DQ92854 862 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 C17orf75Q9HAS0 396 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 ABI2Q9NYB9 513 aaPredicted RBP8.76□□□□□ -1.01
CHPT1-208ENST00000552215 TSPAN1O60635 241 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 THP07101 528 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 SLC8A3P57103 927 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 ATP11AP98196 1134 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 MBTD1Q05BQ5 628 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 SLC39A4Q6P5W5 647 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 RAD9BQ6WBX8 426 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.75□□□□□ -1.01
CHPT1-208ENST00000552215 ZNF467Q7Z7K2 595 aaPredicted RBP8.75□□□□□ -1.01
CHPT1-208ENST00000552215 EHBP1Q8NDI1 1231 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 SPATA20Q8TB22 786 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 ACSF2Q96CM8 615 aaPredicted RBP8.75□□□□□ -1.01
CHPT1-208ENST00000552215 BTBD6Q96KE9 485 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 BPIFA3Q9BQP9 254 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 CXCL16Q9H2A7 254 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 HCSTQ9UBK5 93 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 IPPQ9Y573 584 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 ANKRD62A6NC57 917 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 PPEF2O14830 753 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 NCK2O43639 380 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 SRGAP2O75044 1071 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 LYPLA2O95372 231 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 GTF2H1P32780 548 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 VPS41P49754 854 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 BTG3Q14201 252 aaPredicted RBP8.75□□□□□ -1.01
CHPT1-208ENST00000552215 FAM182AQ5T1J6 154 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 RBM23Q86U06 439 aaKnown RBP8.75□□□□□ -1.01
CHPT1-208ENST00000552215 C12orf29Q8N999 325 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 TC2NQ8N9U0 490 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 URGCPQ8TCY9 931 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 SEPT8Q92599 483 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 TIPINQ9BVW5 301 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 PACSIN1Q9BY11 444 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 SMYD3Q9H7B4 428 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 APEX2Q9UBZ4 518 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 PCSK1NQ9UHG2 260 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 XPOTO43592 962 aaKnown RBP8.75□□□□□ -1.01
CHPT1-208ENST00000552215 NDUFA10O95299 355 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 FTLP02792 175 aaPredicted RBP8.75□□□□□ -1.01
CHPT1-208ENST00000552215 H2AFZP0C0S5 128 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 OR4Q2P0C623 313 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 ALDH7A1P49419 539 aaKnown RBP8.75□□□□□ -1.01
CHPT1-208ENST00000552215 WNT7BP56706 349 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 KLHDC7AQ5VTJ3 777 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 TDRD10Q5VZ19 366 aaKnown RBP8.75□□□□□ -1.01
CHPT1-208ENST00000552215 H2AFVQ71UI9 128 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 TAS1R3Q7RTX0 852 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 RBBP8NLQ8NC74 664 aaPredicted RBP8.75□□□□□ -1.01
CHPT1-208ENST00000552215 SEPT5Q99719 369 aaPredicted RBP8.75□□□□□ -1.01
CHPT1-208ENST00000552215 IFT122Q9HBG6 1241 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 KIAA1586Q9HCI6 787 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 FAM105AQ9NUU6 356 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 WBP1LQ9NX94 342 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 ARHGAP28Q9P2N2 729 aa8.75□□□□□ -1.01
CHPT1-208ENST00000552215 KPNA6O60684 536 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 HOXC6P09630 235 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 CLCN1P35523 988 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 GJA9P57773 515 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 RTP1P59025 263 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 DYNLT1P63172 113 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 FAM193AP78312 1265 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 RBP5P82980 135 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 LRRC8DQ7L1W4 858 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 FAM228AQ86W67 206 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 CCDC33Q8N5R6 958 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 GDAP1L1Q96MZ0 367 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 ALS2CR12Q96Q35 445 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 PDZD7Q9H5P4 517 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 RSAD1Q9HA92 442 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 NGRNQ9NPE2 291 aaKnown RBP8.74□□□□□ -1.01
CHPT1-208ENST00000552215 TRAF3IP3Q9Y228 551 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 PCDHA2Q9Y5H9 948 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 TACC1O75410 805 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 HMBSP08397 361 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 RHOXF2BP0C7M4 288 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 PHLDB3Q6NSJ2 640 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 METTL23Q86XA0 190 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 REM2Q8IYK8 340 aaPredicted RBP8.74□□□□□ -1.01
CHPT1-208ENST00000552215 RHOXF2Q9BQY4 288 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 TMEM8AQ9HCN3 771 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 IMPACTQ9P2X3 320 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 PHLPP2Q6ZVD8 1323 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 ARVCFO00192 962 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 CYB561D2O14569 222 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 CEP104O60308 925 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 MMEP08473 750 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 RPL17P18621 184 aaKnown RBP8.74□□□□□ -1.01
CHPT1-208ENST00000552215 NCKAP1LP55160 1127 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 MIIPQ5JXC2 388 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 FAM171A1Q5VUB5 890 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 SRGAP1Q7Z6B7 1085 aa8.74□□□□□ -1.01
CHPT1-208ENST00000552215 PALB2Q86YC2 1186 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms