RNA–Protein interactions for RNA: ENST00000550929.5

LETMD1-228, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LETMD1, Length 1,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-228ENST00000550929 TMX3Q96JJ7 454 aa9.92□□□□□ -0.82
LETMD1-228ENST00000550929 ZMAT2Q96NC0 199 aaKnown RBP9.92□□□□□ -0.82
LETMD1-228ENST00000550929 MRPL4Q9BYD3 311 aaKnown RBP9.92□□□□□ -0.82
LETMD1-228ENST00000550929 TMEM134Q9H6X4 195 aa9.92□□□□□ -0.82
LETMD1-228ENST00000550929 HCFC1R1Q9NWW0 138 aa9.92□□□□□ -0.82
LETMD1-228ENST00000550929 EPS15L1Q9UBC2 864 aa9.92□□□□□ -0.82
LETMD1-228ENST00000550929 CDY1Q9Y6F8 540 aa9.92□□□□□ -0.82
LETMD1-228ENST00000550929 PHLPP2Q6ZVD8 1323 aa9.91□□□□□ -0.82
LETMD1-228ENST00000550929 C2orf16Q68DN1 1984 aa9.91□□□□□ -0.82
LETMD1-228ENST00000550929 VWA3AA6NCI4 1184 aa9.91□□□□□ -0.82
LETMD1-228ENST00000550929 H3BQV1 296 aa9.91□□□□□ -0.82
LETMD1-228ENST00000550929 RRP9O43818 475 aaKnown RBP9.91□□□□□ -0.82
LETMD1-228ENST00000550929 AOC1P19801 751 aa9.91□□□□□ -0.82
LETMD1-228ENST00000550929 PRPHP41219 470 aa9.91□□□□□ -0.82
LETMD1-228ENST00000550929 DMP1Q13316 513 aaPredicted RBP9.91□□□□□ -0.82
LETMD1-228ENST00000550929 RAB33AQ14088 237 aa9.91□□□□□ -0.82
LETMD1-228ENST00000550929 DHX8Q14562 1220 aaKnown RBP9.91□□□□□ -0.82
LETMD1-228ENST00000550929 RABEP1Q15276 862 aa9.91□□□□□ -0.82
LETMD1-228ENST00000550929 UPP1Q16831 310 aa9.91□□□□□ -0.82
LETMD1-228ENST00000550929 SPECC1Q5M775 1068 aa9.91□□□□□ -0.82
LETMD1-228ENST00000550929 AXDND1Q5T1B0 1012 aaPredicted RBP9.91□□□□□ -0.82
LETMD1-228ENST00000550929 PARM1Q6UWI2 310 aa9.91□□□□□ -0.82
LETMD1-228ENST00000550929 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.91□□□□□ -0.82
LETMD1-228ENST00000550929 ASCL5Q7RTU5 278 aa9.91□□□□□ -0.82
LETMD1-228ENST00000550929 APBB1IPQ7Z5R6 666 aaPredicted RBP9.91□□□□□ -0.82
LETMD1-228ENST00000550929 ING5Q8WYH8 240 aa9.91□□□□□ -0.82
LETMD1-228ENST00000550929 C18orf25Q96B23 403 aaPredicted RBP9.91□□□□□ -0.82
LETMD1-228ENST00000550929 DRC1Q96MC2 740 aa9.91□□□□□ -0.82
LETMD1-228ENST00000550929 ACAP3Q96P50 834 aa9.91□□□□□ -0.82
LETMD1-228ENST00000550929 RHOBTB2Q9BYZ6 727 aa9.91□□□□□ -0.82
LETMD1-228ENST00000550929 IRF2BPLQ9H1B7 796 aa9.91□□□□□ -0.82
LETMD1-228ENST00000550929 PTPRHQ9HD43 1115 aa9.91□□□□□ -0.82
LETMD1-228ENST00000550929 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.91□□□□□ -0.82
LETMD1-228ENST00000550929 ARHGAP28Q9P2N2 729 aa9.91□□□□□ -0.82
LETMD1-228ENST00000550929 NUMBLQ9Y6R0 609 aa9.91□□□□□ -0.82
LETMD1-228ENST00000550929 DENND4AQ7Z401 1863 aa9.91□□□□□ -0.82
LETMD1-228ENST00000550929 PPP1R3GB7ZBB8 358 aa9.9□□□□□ -0.82
LETMD1-228ENST00000550929 LAD1O00515 517 aa9.9□□□□□ -0.82
LETMD1-228ENST00000550929 PODXLO00592 558 aa9.9□□□□□ -0.82
LETMD1-228ENST00000550929 ABLIM1O14639 778 aa9.9□□□□□ -0.82
LETMD1-228ENST00000550929 MEFVO15553 781 aaPredicted RBP9.9□□□□□ -0.82
LETMD1-228ENST00000550929 C1RP00736 705 aa9.9□□□□□ -0.82
LETMD1-228ENST00000550929 DCNP07585 359 aaKnown RBP9.9□□□□□ -0.82
LETMD1-228ENST00000550929 SRFP11831 508 aa9.9□□□□□ -0.82
LETMD1-228ENST00000550929 MATR3P43243 847 aaKnown RBP eCLIP9.9□□□□□ -0.82
LETMD1-228ENST00000550929 GPC5P78333 572 aa9.9□□□□□ -0.82
LETMD1-228ENST00000550929 ATP2C1P98194 919 aaPredicted RBP9.9□□□□□ -0.82
LETMD1-228ENST00000550929 SPAG1Q07617 926 aa9.9□□□□□ -0.82
LETMD1-228ENST00000550929 HTR4Q13639 388 aa9.9□□□□□ -0.82
LETMD1-228ENST00000550929 MPZL3Q6UWV2 235 aa9.9□□□□□ -0.82
LETMD1-228ENST00000550929 ALKAL1Q6UXT8 129 aa9.9□□□□□ -0.82
LETMD1-228ENST00000550929 FRMD5Q7Z6J6 570 aa9.9□□□□□ -0.82
LETMD1-228ENST00000550929 DTWD2Q8NBA8 298 aa9.9□□□□□ -0.82
LETMD1-228ENST00000550929 FGF14Q92915 247 aa9.9□□□□□ -0.82
LETMD1-228ENST00000550929 CDK5RAP3Q96JB5 506 aa9.9□□□□□ -0.82
LETMD1-228ENST00000550929 SNX27Q96L92 541 aa9.9□□□□□ -0.82
LETMD1-228ENST00000550929 UROC1Q96N76 676 aa9.9□□□□□ -0.82
LETMD1-228ENST00000550929 TBC1D17Q9HA65 648 aa9.9□□□□□ -0.82
LETMD1-228ENST00000550929 TOPORSQ9NS56 1045 aaPredicted RBP9.9□□□□□ -0.82
LETMD1-228ENST00000550929 ANKFY1Q9P2R3 1169 aa9.9□□□□□ -0.82
LETMD1-228ENST00000550929 DNMT3BQ9UBC3 853 aaKnown RBP9.9□□□□□ -0.82
LETMD1-228ENST00000550929 MTRRQ9UBK8 725 aa9.9□□□□□ -0.82
LETMD1-228ENST00000550929 WNT16Q9UBV4 365 aa9.9□□□□□ -0.82
LETMD1-228ENST00000550929 CDH7Q9ULB5 785 aa9.9□□□□□ -0.82
LETMD1-228ENST00000550929 KIF3AQ9Y496 699 aa9.9□□□□□ -0.82
LETMD1-228ENST00000550929 ANHXE9PGG2 379 aa9.89□□□□□ -0.83
LETMD1-228ENST00000550929 TMEM189-UBE2V1I3L0A0 370 aa9.89□□□□□ -0.83
LETMD1-228ENST00000550929 TRAPPC3O43617 180 aa9.89□□□□□ -0.83
LETMD1-228ENST00000550929 XYLBO75191 536 aa9.89□□□□□ -0.83
LETMD1-228ENST00000550929 PAPLNO95428 1278 aa9.89□□□□□ -0.83
LETMD1-228ENST00000550929 HNRNPA1P09651 372 aaKnown RBP eCLIP9.89□□□□□ -0.83
LETMD1-228ENST00000550929 PLA2G4BP0C869 781 aa9.89□□□□□ -0.83
LETMD1-228ENST00000550929 MCF2P10911 925 aa9.89□□□□□ -0.83
LETMD1-228ENST00000550929 PLS3P13797 630 aa9.89□□□□□ -0.83
LETMD1-228ENST00000550929 PROZP22891 400 aa9.89□□□□□ -0.83
LETMD1-228ENST00000550929 GUCY2CP25092 1073 aa9.89□□□□□ -0.83
LETMD1-228ENST00000550929 STRN3Q13033 797 aa9.89□□□□□ -0.83
LETMD1-228ENST00000550929 SLC10A6Q3KNW5 377 aa9.89□□□□□ -0.83
LETMD1-228ENST00000550929 RILPL1Q5EBL4 403 aa9.89□□□□□ -0.83
LETMD1-228ENST00000550929 XKR4Q5GH76 650 aa9.89□□□□□ -0.83
LETMD1-228ENST00000550929 PDXDC1Q6P996 788 aa9.89□□□□□ -0.83
LETMD1-228ENST00000550929 THSD4Q6ZMP0 1018 aa9.89□□□□□ -0.83
LETMD1-228ENST00000550929 ANKS3Q6ZW76 656 aa9.89□□□□□ -0.83
LETMD1-228ENST00000550929 SYT2Q8N9I0 419 aaPredicted RBP9.89□□□□□ -0.83
LETMD1-228ENST00000550929 TMEM161BQ8NDZ6 487 aa9.89□□□□□ -0.83
LETMD1-228ENST00000550929 FGF13Q92913 245 aa9.89□□□□□ -0.83
LETMD1-228ENST00000550929 NXPE3Q969Y0 559 aa9.89□□□□□ -0.83
LETMD1-228ENST00000550929 MCRS1Q96EZ8 462 aa9.89□□□□□ -0.83
LETMD1-228ENST00000550929 KXD1Q9BQD3 176 aa9.89□□□□□ -0.83
LETMD1-228ENST00000550929 RTP3Q9BQQ7 232 aa9.89□□□□□ -0.83
LETMD1-228ENST00000550929 SMC3Q9UQE7 1217 aa9.89□□□□□ -0.83
LETMD1-228ENST00000550929 NUB1Q9Y5A7 615 aa9.89□□□□□ -0.83
LETMD1-228ENST00000550929 LRRN2O75325 713 aa9.88□□□□□ -0.83
LETMD1-228ENST00000550929 SEC24AO95486 1093 aa9.88□□□□□ -0.83
LETMD1-228ENST00000550929 MAPTP10636 758 aaKnown RBP9.88□□□□□ -0.83
LETMD1-228ENST00000550929 KCNE1P15382 129 aa9.88□□□□□ -0.83
LETMD1-228ENST00000550929 ELF1P32519 619 aa9.88□□□□□ -0.83
LETMD1-228ENST00000550929 SLC12A3P55017 1021 aa9.88□□□□□ -0.83
LETMD1-228ENST00000550929 ROR1Q01973 937 aa9.88□□□□□ -0.83
LETMD1-228ENST00000550929 GRIN1Q05586 938 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms