RNA–Protein interactions for RNA: ENST00000550755.5

LETMD1-226, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-226ENST00000550755 CHMP4CQ96CF2 233 aa6.88□□□□□ -1.31
LETMD1-226ENST00000550755 CLPTM1LQ96KA5 538 aa6.88□□□□□ -1.31
LETMD1-226ENST00000550755 MLST8Q9BVC4 326 aa6.88□□□□□ -1.31
LETMD1-226ENST00000550755 GSTO2Q9H4Y5 243 aa6.88□□□□□ -1.31
LETMD1-226ENST00000550755 KLHL11Q9NVR0 708 aa6.88□□□□□ -1.31
LETMD1-226ENST00000550755 FBXO34Q9NWN3 711 aa6.88□□□□□ -1.31
LETMD1-226ENST00000550755 RNF181Q9P0P0 153 aa6.88□□□□□ -1.31
LETMD1-226ENST00000550755 HS3ST4Q9Y661 456 aa6.88□□□□□ -1.31
LETMD1-226ENST00000550755 CENPVL1A0A0U1RR11 272 aa6.87□□□□□ -1.31
LETMD1-226ENST00000550755 A0A1B0GTW7 788 aa6.87□□□□□ -1.31
LETMD1-226ENST00000550755 B3GALT2O43825 422 aa6.87□□□□□ -1.31
LETMD1-226ENST00000550755 DTNBO60941 627 aa6.87□□□□□ -1.31
LETMD1-226ENST00000550755 CFIP05156 583 aa6.87□□□□□ -1.31
LETMD1-226ENST00000550755 CKBP12277 381 aa6.87□□□□□ -1.31
LETMD1-226ENST00000550755 GCSHP23434 173 aa6.87□□□□□ -1.31
LETMD1-226ENST00000550755 SLC6A2P23975 617 aa6.87□□□□□ -1.31
LETMD1-226ENST00000550755 ZFP36P26651 326 aaKnown RBP6.87□□□□□ -1.31
LETMD1-226ENST00000550755 TARDBPQ13148 414 aaKnown RBP eCLIP6.87□□□□□ -1.31
LETMD1-226ENST00000550755 C3orf36Q3SXR2 165 aa6.87□□□□□ -1.31
LETMD1-226ENST00000550755 TTC7BQ86TV6 843 aa6.87□□□□□ -1.31
LETMD1-226ENST00000550755 ARHGEF19Q8IW93 802 aa6.87□□□□□ -1.31
LETMD1-226ENST00000550755 LCORLQ8N3X6 602 aa6.87□□□□□ -1.31
LETMD1-226ENST00000550755 CHFRQ96EP1 664 aa6.87□□□□□ -1.31
LETMD1-226ENST00000550755 NEU1Q99519 415 aa6.87□□□□□ -1.31
LETMD1-226ENST00000550755 TTPALQ9BTX7 342 aa6.87□□□□□ -1.31
LETMD1-226ENST00000550755 TYW1Q9NV66 732 aaKnown RBP6.87□□□□□ -1.31
LETMD1-226ENST00000550755 MAP3K2Q9Y2U5 619 aa6.87□□□□□ -1.31
LETMD1-226ENST00000550755 MTO1Q9Y2Z2 717 aaKnown RBP6.87□□□□□ -1.31
LETMD1-226ENST00000550755 LUC7L2Q9Y383 392 aaKnown RBP6.87□□□□□ -1.31
LETMD1-226ENST00000550755 A0A087X1B8 175 aa6.86□□□□□ -1.31
LETMD1-226ENST00000550755 LPXNO60711 386 aa6.86□□□□□ -1.31
LETMD1-226ENST00000550755 HAUS5O94927 633 aa6.86□□□□□ -1.31
LETMD1-226ENST00000550755 GPANK1O95872 356 aa6.86□□□□□ -1.31
LETMD1-226ENST00000550755 EDNRBP24530 442 aa6.86□□□□□ -1.31
LETMD1-226ENST00000550755 USP14P54578 494 aa6.86□□□□□ -1.31
LETMD1-226ENST00000550755 TAP1Q03518 808 aa6.86□□□□□ -1.31
LETMD1-226ENST00000550755 PABPC1LQ4VXU2 614 aaKnown RBP6.86□□□□□ -1.31
LETMD1-226ENST00000550755 RPUSD2Q8IZ73 545 aaKnown RBP6.86□□□□□ -1.31
LETMD1-226ENST00000550755 TBC1D15Q8TC07 691 aa6.86□□□□□ -1.31
LETMD1-226ENST00000550755 IFI44Q8TCB0 444 aa6.86□□□□□ -1.31
LETMD1-226ENST00000550755 NUP133Q8WUM0 1156 aa6.86□□□□□ -1.31
LETMD1-226ENST00000550755 KAT5Q92993 513 aa6.86□□□□□ -1.31
LETMD1-226ENST00000550755 PACSIN1Q9BY11 444 aa6.86□□□□□ -1.31
LETMD1-226ENST00000550755 KRTAP4-5Q9BYR2 181 aa6.86□□□□□ -1.31
LETMD1-226ENST00000550755 CALCOCO1Q9P1Z2 691 aa6.86□□□□□ -1.31
LETMD1-226ENST00000550755 ANKFY1Q9P2R3 1169 aa6.86□□□□□ -1.31
LETMD1-226ENST00000550755 CDHR4A6H8M9 788 aa6.85□□□□□ -1.31
LETMD1-226ENST00000550755 UNC119BA6NIH7 251 aa6.85□□□□□ -1.31
LETMD1-226ENST00000550755 GRM6O15303 877 aa6.85□□□□□ -1.31
LETMD1-226ENST00000550755 ERN1O75460 977 aaKnown RBP6.85□□□□□ -1.31
LETMD1-226ENST00000550755 CDKL5O76039 1030 aa6.85□□□□□ -1.31
LETMD1-226ENST00000550755 IL33O95760 270 aa6.85□□□□□ -1.31
LETMD1-226ENST00000550755 FOSP01100 380 aaPredicted RBP6.85□□□□□ -1.31
LETMD1-226ENST00000550755 FSTL1Q12841 308 aa6.85□□□□□ -1.31
LETMD1-226ENST00000550755 VRK3Q8IV63 474 aa6.85□□□□□ -1.31
LETMD1-226ENST00000550755 FAM43AQ8N2R8 423 aa6.85□□□□□ -1.31
LETMD1-226ENST00000550755 TMEM132CQ8N3T6 1108 aa6.85□□□□□ -1.31
LETMD1-226ENST00000550755 AOPEPQ8N6M6 819 aa6.85□□□□□ -1.31
LETMD1-226ENST00000550755 RNF31Q96EP0 1072 aa6.85□□□□□ -1.31
LETMD1-226ENST00000550755 PNKPQ96T60 521 aa6.85□□□□□ -1.31
LETMD1-226ENST00000550755 ZSWIM1Q9BR11 485 aa6.85□□□□□ -1.31
LETMD1-226ENST00000550755 WDR11Q9BZH6 1224 aa6.85□□□□□ -1.31
LETMD1-226ENST00000550755 SERHL2Q9H4I8 314 aa6.85□□□□□ -1.31
LETMD1-226ENST00000550755 AASDHPPTQ9NRN7 309 aa6.85□□□□□ -1.31
LETMD1-226ENST00000550755 SERPINB13Q9UIV8 391 aa6.85□□□□□ -1.31
LETMD1-226ENST00000550755 FOXN1O15353 648 aa6.84□□□□□ -1.31
LETMD1-226ENST00000550755 RHOBTB3O94955 611 aa6.84□□□□□ -1.31
LETMD1-226ENST00000550755 CD1AP06126 327 aa6.84□□□□□ -1.31
LETMD1-226ENST00000550755 VCAM1P19320 739 aa6.84□□□□□ -1.31
LETMD1-226ENST00000550755 SMARCA1P28370 1054 aa6.84□□□□□ -1.31
LETMD1-226ENST00000550755 AVPR1BP47901 424 aa6.84□□□□□ -1.31
LETMD1-226ENST00000550755 NEK2P51955 445 aa6.84□□□□□ -1.31
LETMD1-226ENST00000550755 BLOC1S1P78537 153 aa6.84□□□□□ -1.31
LETMD1-226ENST00000550755 HSD11B2P80365 405 aa6.84□□□□□ -1.31
LETMD1-226ENST00000550755 OCA2Q04671 838 aa6.84□□□□□ -1.31
LETMD1-226ENST00000550755 TMEM240Q5SV17 173 aa6.84□□□□□ -1.31
LETMD1-226ENST00000550755 THEMIS2Q5TEJ8 643 aa6.84□□□□□ -1.31
LETMD1-226ENST00000550755 LDLRAD3Q86YD5 345 aa6.84□□□□□ -1.31
LETMD1-226ENST00000550755 SUPT20HQ8NEM7 779 aa6.84□□□□□ -1.31
LETMD1-226ENST00000550755 ALOXE3Q9BYJ1 711 aa6.84□□□□□ -1.31
LETMD1-226ENST00000550755 IKZF4Q9H2S9 585 aa6.84□□□□□ -1.31
LETMD1-226ENST00000550755 PCDHB1Q9Y5F3 818 aa6.84□□□□□ -1.31
LETMD1-226ENST00000550755 CT47B1P0C2W7 299 aaPredicted RBP6.83□□□□□ -1.32
LETMD1-226ENST00000550755 FGFR4P22455 802 aa6.83□□□□□ -1.32
LETMD1-226ENST00000550755 ZEB1P37275 1124 aaPredicted RBP6.83□□□□□ -1.32
LETMD1-226ENST00000550755 ZNF280AP59817 542 aaPredicted RBP6.83□□□□□ -1.32
LETMD1-226ENST00000550755 PURAQ00577 322 aaKnown RBP6.83□□□□□ -1.32
LETMD1-226ENST00000550755 ABHD17BQ5VST6 288 aa6.83□□□□□ -1.32
LETMD1-226ENST00000550755 NOL8Q76FK4 1167 aaKnown RBP6.83□□□□□ -1.32
LETMD1-226ENST00000550755 CMTR2Q8IYT2 770 aaKnown RBP6.83□□□□□ -1.32
LETMD1-226ENST00000550755 CPA6Q8N4T0 437 aa6.83□□□□□ -1.32
LETMD1-226ENST00000550755 DCBLD1Q8N8Z6 715 aa6.83□□□□□ -1.32
LETMD1-226ENST00000550755 IL17RDQ8NFM7 739 aa6.83□□□□□ -1.32
LETMD1-226ENST00000550755 HSPBAP1Q96EW2 488 aa6.83□□□□□ -1.32
LETMD1-226ENST00000550755 MARS2Q96GW9 593 aaKnown RBP6.83□□□□□ -1.32
LETMD1-226ENST00000550755 MRGPRX4Q96LA9 322 aa6.83□□□□□ -1.32
LETMD1-226ENST00000550755 MED15Q96RN5 788 aa6.83□□□□□ -1.32
LETMD1-226ENST00000550755 GALNT9Q9HCQ5 603 aa6.83□□□□□ -1.32
LETMD1-226ENST00000550755 GNL3LQ9NVN8 582 aaKnown RBP6.83□□□□□ -1.32
LETMD1-226ENST00000550755 TESQ9UGI8 421 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms