RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 AGAP11Q8TF27 550 aa10.97□□□□□ -0.65
ERBB3-214ENST00000550070 CCDC127Q96BQ5 260 aa10.97□□□□□ -0.65
ERBB3-214ENST00000550070 MIEF2Q96C03 454 aa10.97□□□□□ -0.65
ERBB3-214ENST00000550070 SNF8Q96H20 258 aa10.97□□□□□ -0.65
ERBB3-214ENST00000550070 CSRNP1Q96S65 589 aa10.97□□□□□ -0.65
ERBB3-214ENST00000550070 RIT2Q99578 217 aa10.97□□□□□ -0.65
ERBB3-214ENST00000550070 GPRC5CQ9NQ84 441 aa10.97□□□□□ -0.65
ERBB3-214ENST00000550070 PRKAG3Q9UGI9 489 aa10.97□□□□□ -0.65
ERBB3-214ENST00000550070 RABL2BQ9UNT1 228 aa10.97□□□□□ -0.65
ERBB3-214ENST00000550070 RBM47A0AV96 593 aaKnown RBP10.96□□□□□ -0.65
ERBB3-214ENST00000550070 MAPK13O15264 365 aa10.96□□□□□ -0.65
ERBB3-214ENST00000550070 TIMM44O43615 452 aa10.96□□□□□ -0.65
ERBB3-214ENST00000550070 GJB6O95452 261 aa10.96□□□□□ -0.65
ERBB3-214ENST00000550070 P4HBP07237 508 aaKnown RBP10.96□□□□□ -0.65
ERBB3-214ENST00000550070 ALADP13716 330 aa10.96□□□□□ -0.65
ERBB3-214ENST00000550070 BRAFP15056 766 aa10.96□□□□□ -0.65
ERBB3-214ENST00000550070 ADSSP30520 456 aa10.96□□□□□ -0.65
ERBB3-214ENST00000550070 INHBEP58166 350 aa10.96□□□□□ -0.65
ERBB3-214ENST00000550070 COPS2P61201 443 aa10.96□□□□□ -0.65
ERBB3-214ENST00000550070 TRAF1Q13077 416 aa10.96□□□□□ -0.65
ERBB3-214ENST00000550070 ALCAMQ13740 583 aa10.96□□□□□ -0.65
ERBB3-214ENST00000550070 CGB2Q6NT52 195 aa10.96□□□□□ -0.65
ERBB3-214ENST00000550070 SEPT14Q6ZU15 432 aa10.96□□□□□ -0.65
ERBB3-214ENST00000550070 TRMT1LQ7Z2T5 733 aaKnown RBP10.96□□□□□ -0.65
ERBB3-214ENST00000550070 SPATA21Q7Z572 469 aa10.96□□□□□ -0.65
ERBB3-214ENST00000550070 TRIM74Q86UV6 250 aa10.96□□□□□ -0.65
ERBB3-214ENST00000550070 TRIM73Q86UV7 250 aa10.96□□□□□ -0.65
ERBB3-214ENST00000550070 KIF2BQ8N4N8 673 aa10.96□□□□□ -0.65
ERBB3-214ENST00000550070 FITM2Q8N6M3 262 aa10.96□□□□□ -0.65
ERBB3-214ENST00000550070 SREK1Q8WXA9 508 aaKnown RBP10.96□□□□□ -0.65
ERBB3-214ENST00000550070 PRCCQ92733 491 aaPredicted RBP10.96□□□□□ -0.65
ERBB3-214ENST00000550070 SAAL1Q96ER3 474 aa10.96□□□□□ -0.65
ERBB3-214ENST00000550070 EHMT1Q9H9B1 1298 aa10.96□□□□□ -0.65
ERBB3-214ENST00000550070 KCNH7Q9NS40 1196 aa10.96□□□□□ -0.65
ERBB3-214ENST00000550070 NINJ2Q9NZG7 142 aa10.96□□□□□ -0.65
ERBB3-214ENST00000550070 TBK1Q9UHD2 729 aa10.96□□□□□ -0.65
ERBB3-214ENST00000550070 ANAPC7Q9UJX3 599 aa10.96□□□□□ -0.65
ERBB3-214ENST00000550070 ZBTB21Q9ULJ3 1066 aa10.96□□□□□ -0.65
ERBB3-214ENST00000550070 MRPL11Q9Y3B7 192 aaKnown RBP10.96□□□□□ -0.65
ERBB3-214ENST00000550070 ATRNL1Q5VV63 1379 aa10.96□□□□□ -0.66
ERBB3-214ENST00000550070 A8MUI8 341 aa10.96□□□□□ -0.66
ERBB3-214ENST00000550070 DHX15O43143 795 aaKnown RBP10.96□□□□□ -0.66
ERBB3-214ENST00000550070 ALDH1B1P30837 517 aa10.96□□□□□ -0.66
ERBB3-214ENST00000550070 PEX3P56589 373 aa10.96□□□□□ -0.66
ERBB3-214ENST00000550070 ADCY1Q08828 1119 aa10.96□□□□□ -0.66
ERBB3-214ENST00000550070 MGAT5Q09328 741 aa10.96□□□□□ -0.66
ERBB3-214ENST00000550070 MYO1EQ12965 1108 aa10.96□□□□□ -0.66
ERBB3-214ENST00000550070 PTK6Q13882 451 aa10.96□□□□□ -0.66
ERBB3-214ENST00000550070 TNIP1Q15025 636 aa10.96□□□□□ -0.66
ERBB3-214ENST00000550070 SNRNP35Q16560 246 aaKnown RBP10.96□□□□□ -0.66
ERBB3-214ENST00000550070 PHLDB2Q86SQ0 1253 aa10.96□□□□□ -0.66
ERBB3-214ENST00000550070 KIRREL3Q8IZU9 778 aa10.96□□□□□ -0.66
ERBB3-214ENST00000550070 C7orf43Q8WVR3 580 aa10.96□□□□□ -0.66
ERBB3-214ENST00000550070 L3MBTL3Q96JM7 780 aaPredicted RBP10.96□□□□□ -0.66
ERBB3-214ENST00000550070 RMDN2Q96LZ7 410 aa10.96□□□□□ -0.66
ERBB3-214ENST00000550070 DCLK3Q9C098 648 aa10.96□□□□□ -0.66
ERBB3-214ENST00000550070 TOPORSQ9NS56 1045 aaPredicted RBP10.96□□□□□ -0.66
ERBB3-214ENST00000550070 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.96□□□□□ -0.66
ERBB3-214ENST00000550070 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.96□□□□□ -0.66
ERBB3-214ENST00000550070 TRIM33Q9UPN9 1127 aa10.96□□□□□ -0.66
ERBB3-214ENST00000550070 R3HDM2Q9Y2K5 976 aaKnown RBP10.96□□□□□ -0.66
ERBB3-214ENST00000550070 ARL2BPQ9Y2Y0 163 aa10.96□□□□□ -0.66
ERBB3-214ENST00000550070 TMX2Q9Y320 296 aa10.96□□□□□ -0.66
ERBB3-214ENST00000550070 ZNF646O15015 1829 aaPredicted RBP10.95□□□□□ -0.66
ERBB3-214ENST00000550070 THAP12O43422 761 aa10.95□□□□□ -0.66
ERBB3-214ENST00000550070 ANP32DO95626 131 aa10.95□□□□□ -0.66
ERBB3-214ENST00000550070 KRT16P08779 473 aa10.95□□□□□ -0.66
ERBB3-214ENST00000550070 ATP5DP30049 168 aa10.95□□□□□ -0.66
ERBB3-214ENST00000550070 MAPK4P31152 587 aa10.95□□□□□ -0.66
ERBB3-214ENST00000550070 ABL2P42684 1182 aa10.95□□□□□ -0.66
ERBB3-214ENST00000550070 VPS41P49754 854 aa10.95□□□□□ -0.66
ERBB3-214ENST00000550070 SPP2Q13103 211 aa10.95□□□□□ -0.66
ERBB3-214ENST00000550070 ZYXQ15942 572 aaKnown RBP10.95□□□□□ -0.66
ERBB3-214ENST00000550070 DAB2IPQ5VWQ8 1189 aa10.95□□□□□ -0.66
ERBB3-214ENST00000550070 KRT39Q6A163 491 aa10.95□□□□□ -0.66
ERBB3-214ENST00000550070 LDHDQ86WU2 507 aa10.95□□□□□ -0.66
ERBB3-214ENST00000550070 LSM14AQ8ND56 463 aaKnown RBP10.95□□□□□ -0.66
ERBB3-214ENST00000550070 TAS1R2Q8TE23 839 aa10.95□□□□□ -0.66
ERBB3-214ENST00000550070 PARD3BQ8TEW8 1205 aa10.95□□□□□ -0.66
ERBB3-214ENST00000550070 NSMCE1Q8WV22 266 aa10.95□□□□□ -0.66
ERBB3-214ENST00000550070 KLHL29Q96CT2 875 aa10.95□□□□□ -0.66
ERBB3-214ENST00000550070 PRMT6Q96LA8 375 aaPredicted RBP10.95□□□□□ -0.66
ERBB3-214ENST00000550070 PLVAPQ9BX97 442 aa10.95□□□□□ -0.66
ERBB3-214ENST00000550070 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.95□□□□□ -0.66
ERBB3-214ENST00000550070 SERPINA10Q9UK55 444 aa10.95□□□□□ -0.66
ERBB3-214ENST00000550070 MROH7Q68CQ1 1323 aa10.95□□□□□ -0.66
ERBB3-214ENST00000550070 ECE2O60344 883 aa10.95□□□□□ -0.66
ERBB3-214ENST00000550070 ENTPD3O75355 529 aa10.95□□□□□ -0.66
ERBB3-214ENST00000550070 TGFB3P10600 412 aa10.95□□□□□ -0.66
ERBB3-214ENST00000550070 GBP2P32456 591 aaPredicted RBP10.95□□□□□ -0.66
ERBB3-214ENST00000550070 GPC3P51654 580 aa10.95□□□□□ -0.66
ERBB3-214ENST00000550070 CLNS1AP54105 237 aaKnown RBP10.95□□□□□ -0.66
ERBB3-214ENST00000550070 CLEC16AQ2KHT3 1053 aa10.95□□□□□ -0.66
ERBB3-214ENST00000550070 LLGL2Q6P1M3 1020 aa10.95□□□□□ -0.66
ERBB3-214ENST00000550070 IL31RAQ8NI17 732 aa10.95□□□□□ -0.66
ERBB3-214ENST00000550070 THOC1Q96FV9 657 aaKnown RBP10.95□□□□□ -0.66
ERBB3-214ENST00000550070 TGS1Q96RS0 853 aaKnown RBP10.95□□□□□ -0.66
ERBB3-214ENST00000550070 FAM118BQ9BPY3 351 aa10.95□□□□□ -0.66
ERBB3-214ENST00000550070 ARHGEF3Q9NR81 526 aa10.95□□□□□ -0.66
ERBB3-214ENST00000550070 FBXO28Q9NVF7 368 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms