RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 PRKCBP05771 671 aa10.84□□□□□ -0.67
TRAFD1-207ENST00000550051 RHOP08100 348 aa10.84□□□□□ -0.67
TRAFD1-207ENST00000550051 TGM1P22735 817 aa10.84□□□□□ -0.67
TRAFD1-207ENST00000550051 CLCNKBP51801 687 aa10.84□□□□□ -0.67
TRAFD1-207ENST00000550051 ANAPC15P60006 121 aa10.84□□□□□ -0.67
TRAFD1-207ENST00000550051 SLC5A9Q2M3M2 681 aa10.84□□□□□ -0.67
TRAFD1-207ENST00000550051 DCAF4L1Q3SXM0 396 aa10.84□□□□□ -0.67
TRAFD1-207ENST00000550051 NT5DC1Q5TFE4 455 aa10.84□□□□□ -0.67
TRAFD1-207ENST00000550051 TANGO2Q6ICL3 276 aa10.84□□□□□ -0.67
TRAFD1-207ENST00000550051 PADI6Q6TGC4 694 aa10.84□□□□□ -0.67
TRAFD1-207ENST00000550051 TPRG1Q6ZUI0 275 aa10.84□□□□□ -0.67
TRAFD1-207ENST00000550051 APBB1IPQ7Z5R6 666 aaPredicted RBP10.84□□□□□ -0.67
TRAFD1-207ENST00000550051 DIS3L2Q8IYB7 885 aaKnown RBP10.84□□□□□ -0.67
TRAFD1-207ENST00000550051 DEPTORQ8TB45 409 aa10.84□□□□□ -0.67
TRAFD1-207ENST00000550051 DNASE1L2Q92874 299 aa10.84□□□□□ -0.67
TRAFD1-207ENST00000550051 TMEM60Q9H2L4 133 aa10.84□□□□□ -0.67
TRAFD1-207ENST00000550051 PRMT8Q9NR22 394 aaPredicted RBP10.84□□□□□ -0.67
TRAFD1-207ENST00000550051 USP20Q9Y2K6 914 aa10.84□□□□□ -0.67
TRAFD1-207ENST00000550051 GDAQ9Y2T3 454 aa10.84□□□□□ -0.67
TRAFD1-207ENST00000550051 SMIM28A0A1B0GU29 152 aa10.83□□□□□ -0.68
TRAFD1-207ENST00000550051 ARHGEF35A5YM69 484 aa10.83□□□□□ -0.68
TRAFD1-207ENST00000550051 K7ERI5 159 aa10.83□□□□□ -0.68
TRAFD1-207ENST00000550051 MAN2B1O00754 1011 aa10.83□□□□□ -0.68
TRAFD1-207ENST00000550051 ZNF197O14709 1029 aa10.83□□□□□ -0.68
TRAFD1-207ENST00000550051 ATMINO43313 823 aaPredicted RBP10.83□□□□□ -0.68
TRAFD1-207ENST00000550051 EDN1P05305 212 aa10.83□□□□□ -0.68
TRAFD1-207ENST00000550051 ATF2P15336 505 aa10.83□□□□□ -0.68
TRAFD1-207ENST00000550051 TKTP29401 623 aaKnown RBP10.83□□□□□ -0.68
TRAFD1-207ENST00000550051 ATXN1P54253 815 aaKnown RBP10.83□□□□□ -0.68
TRAFD1-207ENST00000550051 NRLP54845 237 aa10.83□□□□□ -0.68
TRAFD1-207ENST00000550051 MLLT6P55198 1093 aaPredicted RBP10.83□□□□□ -0.68
TRAFD1-207ENST00000550051 MRPL58Q14197 206 aaKnown RBP10.83□□□□□ -0.68
TRAFD1-207ENST00000550051 ME3Q16798 604 aa10.83□□□□□ -0.68
TRAFD1-207ENST00000550051 TMEM132AQ24JP5 1023 aa10.83□□□□□ -0.68
TRAFD1-207ENST00000550051 PRSS36Q5K4E3 855 aa10.83□□□□□ -0.68
TRAFD1-207ENST00000550051 ATF7IP2Q5U623 682 aa10.83□□□□□ -0.68
TRAFD1-207ENST00000550051 TCEAL8Q8IYN2 117 aa10.83□□□□□ -0.68
TRAFD1-207ENST00000550051 NECAB1Q8N987 351 aa10.83□□□□□ -0.68
TRAFD1-207ENST00000550051 ERMNQ8TAM6 284 aa10.83□□□□□ -0.68
TRAFD1-207ENST00000550051 ING5Q8WYH8 240 aa10.83□□□□□ -0.68
TRAFD1-207ENST00000550051 IER2Q9BTL4 223 aa10.83□□□□□ -0.68
TRAFD1-207ENST00000550051 ZFP14Q9HCL3 533 aa10.83□□□□□ -0.68
TRAFD1-207ENST00000550051 HEBP1Q9NRV9 189 aa10.83□□□□□ -0.68
TRAFD1-207ENST00000550051 MAFFQ9ULX9 164 aa10.83□□□□□ -0.68
TRAFD1-207ENST00000550051 TNFSF13BQ9Y275 285 aa10.83□□□□□ -0.68
TRAFD1-207ENST00000550051 GPR179Q6PRD1 2367 aa10.82□□□□□ -0.68
TRAFD1-207ENST00000550051 SYN3O14994 580 aa10.82□□□□□ -0.68
TRAFD1-207ENST00000550051 LRG1P02750 347 aa10.82□□□□□ -0.68
TRAFD1-207ENST00000550051 TDGF1P13385 188 aa10.82□□□□□ -0.68
TRAFD1-207ENST00000550051 FCARP24071 287 aa10.82□□□□□ -0.68
TRAFD1-207ENST00000550051 ELF1P32519 619 aa10.82□□□□□ -0.68
TRAFD1-207ENST00000550051 RPL9P32969 192 aaKnown RBP10.82□□□□□ -0.68
TRAFD1-207ENST00000550051 MCM7P33993 719 aa10.82□□□□□ -0.68
TRAFD1-207ENST00000550051 GRM5P41594 1212 aa10.82□□□□□ -0.68
TRAFD1-207ENST00000550051 BRCC3P46736 316 aa10.82□□□□□ -0.68
TRAFD1-207ENST00000550051 ROR1Q01973 937 aa10.82□□□□□ -0.68
TRAFD1-207ENST00000550051 LMNB2Q03252 620 aa10.82□□□□□ -0.68
TRAFD1-207ENST00000550051 MTAPQ13126 283 aa10.82□□□□□ -0.68
TRAFD1-207ENST00000550051 ORC2Q13416 577 aaPredicted RBP10.82□□□□□ -0.68
TRAFD1-207ENST00000550051 TRIM29Q14134 588 aa10.82□□□□□ -0.68
TRAFD1-207ENST00000550051 FAM78AQ5JUQ0 283 aa10.82□□□□□ -0.68
TRAFD1-207ENST00000550051 TPGS2Q68CL5 300 aa10.82□□□□□ -0.68
TRAFD1-207ENST00000550051 MAP4K3Q8IVH8 894 aa10.82□□□□□ -0.68
TRAFD1-207ENST00000550051 CELF5Q8N6W0 485 aaKnown RBP10.82□□□□□ -0.68
TRAFD1-207ENST00000550051 C3orf58Q8NDZ4 430 aa10.82□□□□□ -0.68
TRAFD1-207ENST00000550051 NSUN7Q8NE18 718 aaKnown RBP10.82□□□□□ -0.68
TRAFD1-207ENST00000550051 KIFAP3Q92845 792 aa10.82□□□□□ -0.68
TRAFD1-207ENST00000550051 IRF7Q92985 503 aa10.82□□□□□ -0.68
TRAFD1-207ENST00000550051 GTF3C6Q969F1 213 aa10.82□□□□□ -0.68
TRAFD1-207ENST00000550051 IFT74Q96LB3 600 aa10.82□□□□□ -0.68
TRAFD1-207ENST00000550051 TRMT61BQ9BVS5 477 aaKnown RBP10.82□□□□□ -0.68
TRAFD1-207ENST00000550051 CHRDQ9H2X0 955 aa10.82□□□□□ -0.68
TRAFD1-207ENST00000550051 TRPV4Q9HBA0 871 aa10.82□□□□□ -0.68
TRAFD1-207ENST00000550051 PTPRHQ9HD43 1115 aa10.82□□□□□ -0.68
TRAFD1-207ENST00000550051 TOPORSQ9NS56 1045 aaPredicted RBP10.82□□□□□ -0.68
TRAFD1-207ENST00000550051 SLC38A7Q9NVC3 462 aa10.82□□□□□ -0.68
TRAFD1-207ENST00000550051 SMG5Q9UPR3 1016 aaKnown RBP10.82□□□□□ -0.68
TRAFD1-207ENST00000550051 WDR27A2RRH5 827 aa10.81□□□□□ -0.68
TRAFD1-207ENST00000550051 H7C4K7 107 aa10.81□□□□□ -0.68
TRAFD1-207ENST00000550051 I3L4J1 428 aa10.81□□□□□ -0.68
TRAFD1-207ENST00000550051 PRRG1O14668 218 aa10.81□□□□□ -0.68
TRAFD1-207ENST00000550051 SEC24AO95486 1093 aa10.81□□□□□ -0.68
TRAFD1-207ENST00000550051 KCNE1P15382 129 aa10.81□□□□□ -0.68
TRAFD1-207ENST00000550051 CEBPBP17676 345 aa10.81□□□□□ -0.68
TRAFD1-207ENST00000550051 SOX4Q06945 474 aaPredicted RBP10.81□□□□□ -0.68
TRAFD1-207ENST00000550051 PPP2R5DQ14738 602 aa10.81□□□□□ -0.68
TRAFD1-207ENST00000550051 GLRA4Q5JXX5 417 aa10.81□□□□□ -0.68
TRAFD1-207ENST00000550051 CYP4A22Q5TCH4 519 aa10.81□□□□□ -0.68
TRAFD1-207ENST00000550051 TSSK4Q6SA08 328 aa10.81□□□□□ -0.68
TRAFD1-207ENST00000550051 ASB16Q96NS5 453 aa10.81□□□□□ -0.68
TRAFD1-207ENST00000550051 ACO2Q99798 780 aaKnown RBP10.81□□□□□ -0.68
TRAFD1-207ENST00000550051 CORO1BQ9BR76 489 aa10.81□□□□□ -0.68
TRAFD1-207ENST00000550051 RTKNQ9BST9 563 aa10.81□□□□□ -0.68
TRAFD1-207ENST00000550051 CCDC94Q9BW85 323 aaPredicted RBP10.81□□□□□ -0.68
TRAFD1-207ENST00000550051 TMEM134Q9H6X4 195 aa10.81□□□□□ -0.68
TRAFD1-207ENST00000550051 BRD9Q9H8M2 597 aa10.81□□□□□ -0.68
TRAFD1-207ENST00000550051 GOLGA2P5Q9HBQ8 144 aa10.81□□□□□ -0.68
TRAFD1-207ENST00000550051 ZNF334Q9HCZ1 680 aaPredicted RBP10.81□□□□□ -0.68
TRAFD1-207ENST00000550051 F5P12259 2224 aa10.81□□□□□ -0.68
TRAFD1-207ENST00000550051 CITO14578 2027 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms