RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.31□□□□□ -1.56
SCAF11-212ENST00000549162 AMACRQ9UHK6 382 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 ZNF215Q9UL58 517 aaPredicted RBP5.31□□□□□ -1.56
SCAF11-212ENST00000549162 SLC27A5Q9Y2P5 690 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 NEU2Q9Y3R4 380 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 PCDHA5Q9Y5H7 936 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 NUP210LQ5VU65 1888 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 MYH10P35580 1976 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 CCL15-CCL14A0A0B4J2E2 113 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 FAM221BA6H8Z2 402 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 FKTNO75072 461 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 TOM1L1O75674 476 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 DARSP14868 501 aaKnown RBP5.31□□□□□ -1.56
SCAF11-212ENST00000549162 CD9P21926 228 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 ADSSP30520 456 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 CCL15Q16663 113 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 MPZL3Q6UWV2 235 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 C4orf22Q6V702 233 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 TC2NQ8N9U0 490 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 PIBF1Q8WXW3 757 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 SLC10A4Q96EP9 437 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 MYRFLQ96LU7 910 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 ZNF302Q9NR11 478 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 SNTG2Q9NY99 539 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 FLRT1Q9NZU1 646 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 CKAP5Q14008 2032 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 SYN3O14994 580 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 SH3BP5O60239 455 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 MFAP3LO75121 409 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 ADORA2AP29274 412 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 HOXA11P31270 313 aaPredicted RBP5.31□□□□□ -1.56
SCAF11-212ENST00000549162 UBASH3AP57075 661 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 HAND2P61296 217 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 IRX1P78414 480 aaPredicted RBP5.31□□□□□ -1.56
SCAF11-212ENST00000549162 PTK2Q05397 1052 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 PTPN14Q15678 1187 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 PLPP4Q5VZY2 271 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 PM20D1Q6GTS8 502 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 NFXL1Q6ZNB6 911 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 PIK3AP1Q6ZUJ8 805 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 USP37Q86T82 979 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 MYOCDQ8IZQ8 938 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 FSIP1Q8NA03 581 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 KDM1BQ8NB78 822 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 KIAA1524Q8TCG1 905 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 HNRNPLLQ8WVV9 542 aaKnown RBP5.31□□□□□ -1.56
SCAF11-212ENST00000549162 RMDN3Q96TC7 470 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 REEP2Q9BRK0 252 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 NFKBIL1Q9UBC1 381 aaPredicted RBP5.31□□□□□ -1.56
SCAF11-212ENST00000549162 DSEQ9UL01 958 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 PRKAB1Q9Y478 270 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 TRPV2Q9Y5S1 764 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 USP3Q9Y6I4 520 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 A0A0G2JS52 829 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 TARSL2A2RTX5 802 aaKnown RBP5.3□□□□□ -1.56
SCAF11-212ENST00000549162 ESPNB1AK53 854 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 AP5Z1O43299 807 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 OAZ2O95190 189 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 FGF19O95750 216 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 ASS1P00966 412 aaKnown RBP5.3□□□□□ -1.56
SCAF11-212ENST00000549162 GUCY2DQ02846 1103 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 BAATQ14032 418 aaPredicted RBP5.3□□□□□ -1.56
SCAF11-212ENST00000549162 TNFAIP8L3Q5GJ75 292 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 RALGPS1Q5JS13 557 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 ZNF783Q6ZMS7 281 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 ATCAYQ86WG3 371 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 CNGA4Q8IV77 575 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 MREGQ8N565 214 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 CEP120Q8N960 986 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 LRRC57Q8N9N7 239 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 EHBP1Q8NDI1 1231 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 CCDC47Q96A33 483 aaKnown RBP5.3□□□□□ -1.56
SCAF11-212ENST00000549162 TRIM47Q96LD4 638 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 AIFM3Q96NN9 605 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 LXNQ9BS40 222 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 SERTAD1Q9UHV2 236 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 GPSM3Q9Y4H4 160 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 FANCMQ8IYD8 2048 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 KAT6AQ92794 2004 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 A0A0A0MRY4 1105 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 H3BQV1 296 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 TSPAN1O60635 241 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 PSEN2P49810 448 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 GRIN1Q05586 938 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 PPP2R5EQ16537 467 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 INF2Q27J81 1249 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 TBC1D10BQ4KMP7 808 aaPredicted RBP5.3□□□□□ -1.56
SCAF11-212ENST00000549162 IFFO2Q5TF58 517 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 TMTC1Q8IUR5 882 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 FUBP3Q96I24 572 aaKnown RBP eCLIP5.3□□□□□ -1.56
SCAF11-212ENST00000549162 SLC2A13Q96QE2 648 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 TMEM109Q9BVC6 243 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 TRIM62Q9BVG3 475 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 SRRTQ9BXP5 876 aaKnown RBP5.3□□□□□ -1.56
SCAF11-212ENST00000549162 PDZD7Q9H5P4 517 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 C12orf49Q9H741 205 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 PTCH2Q9Y6C5 1203 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 AK5Q9Y6K8 562 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 CCDC85CA6NKD9 419 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 ADCY6O43306 1168 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms