RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 UROC1Q96N76 676 aa22.81■■□□□ 1.24
CACNB3-210ENST00000548874 MTMR12Q9C0I1 747 aa22.81■■□□□ 1.24
CACNB3-210ENST00000548874 HSD3B7Q9H2F3 369 aa22.81■■□□□ 1.24
CACNB3-210ENST00000548874 CBX8Q9HC52 389 aa22.81■■□□□ 1.24
CACNB3-210ENST00000548874 FANCLQ9NW38 375 aa22.81■■□□□ 1.24
CACNB3-210ENST00000548874 TRIOBPQ9H2D6 2365 aa22.81■■□□□ 1.24
CACNB3-210ENST00000548874 CARNS1A5YM72 827 aa22.8■■□□□ 1.24
CACNB3-210ENST00000548874 CASTOR2A6NHX0 329 aa22.8■■□□□ 1.24
CACNB3-210ENST00000548874 SMTNL1A8MU46 457 aa22.8■■□□□ 1.24
CACNB3-210ENST00000548874 TMEM191BP0C7N4 346 aa22.8■■□□□ 1.24
CACNB3-210ENST00000548874 RPL9P32969 192 aaKnown RBP22.8■■□□□ 1.24
CACNB3-210ENST00000548874 AP3M2P53677 418 aa22.8■■□□□ 1.24
CACNB3-210ENST00000548874 BCAR1P56945 870 aa22.8■■□□□ 1.24
CACNB3-210ENST00000548874 DUOXA2Q1HG44 320 aa22.8■■□□□ 1.24
CACNB3-210ENST00000548874 KCNT2Q6UVM3 1135 aa22.8■■□□□ 1.24
CACNB3-210ENST00000548874 C15orf39Q6ZRI6 1047 aa22.8■■□□□ 1.24
CACNB3-210ENST00000548874 C1orf127Q8N9H9 656 aa22.8■■□□□ 1.24
CACNB3-210ENST00000548874 CXorf38Q8TB03 319 aa22.8■■□□□ 1.24
CACNB3-210ENST00000548874 FAM200AQ8TCP9 573 aa22.8■■□□□ 1.24
CACNB3-210ENST00000548874 DDX27Q96GQ7 796 aaKnown RBP22.8■■□□□ 1.24
CACNB3-210ENST00000548874 ANKRD36BP1Q96IX9 119 aa22.8■■□□□ 1.24
CACNB3-210ENST00000548874 ZNF558Q96NG5 402 aa22.8■■□□□ 1.24
CACNB3-210ENST00000548874 PAAF1Q9BRP4 392 aa22.8■■□□□ 1.24
CACNB3-210ENST00000548874 DPP3Q9NY33 737 aa22.8■■□□□ 1.24
CACNB3-210ENST00000548874 CACNG4Q9UBN1 327 aa22.8■■□□□ 1.24
CACNB3-210ENST00000548874 RWDD3Q9Y3V2 267 aa22.8■■□□□ 1.24
CACNB3-210ENST00000548874 ANO9A1A5B4 782 aa22.79■■□□□ 1.24
CACNB3-210ENST00000548874 NRP1O14786 923 aa22.79■■□□□ 1.24
CACNB3-210ENST00000548874 ALDH2P05091 517 aa22.79■■□□□ 1.24
CACNB3-210ENST00000548874 ZNF18P17022 549 aa22.79■■□□□ 1.24
CACNB3-210ENST00000548874 GTF2H1P32780 548 aa22.79■■□□□ 1.24
CACNB3-210ENST00000548874 CLCNKBP51801 687 aa22.79■■□□□ 1.24
CACNB3-210ENST00000548874 ERVK-21P61565 698 aa22.79■■□□□ 1.24
CACNB3-210ENST00000548874 PPP3CAQ08209 521 aa22.79■■□□□ 1.24
CACNB3-210ENST00000548874 UPP1Q16831 310 aa22.79■■□□□ 1.24
CACNB3-210ENST00000548874 SPOUT1Q5T280 376 aaKnown RBP22.79■■□□□ 1.24
CACNB3-210ENST00000548874 SPRED2Q7Z698 418 aa22.79■■□□□ 1.24
CACNB3-210ENST00000548874 TIFAQ96CG3 184 aa22.79■■□□□ 1.24
CACNB3-210ENST00000548874 AAASQ9NRG9 546 aa22.79■■□□□ 1.24
CACNB3-210ENST00000548874 TMEM189-UBE2V1I3L0A0 370 aa22.78■■□□□ 1.24
CACNB3-210ENST00000548874 TULP1O00294 542 aaPredicted RBP22.78■■□□□ 1.24
CACNB3-210ENST00000548874 PODXLO00592 558 aa22.78■■□□□ 1.24
CACNB3-210ENST00000548874 TNNC2P02585 160 aa22.78■■□□□ 1.24
CACNB3-210ENST00000548874 C4BPAP04003 597 aaKnown RBP22.78■■□□□ 1.24
CACNB3-210ENST00000548874 EEF1GP26641 437 aaKnown RBP22.78■■□□□ 1.24
CACNB3-210ENST00000548874 BMPR1AP36894 532 aa22.78■■□□□ 1.24
CACNB3-210ENST00000548874 PBX3P40426 434 aa22.78■■□□□ 1.24
CACNB3-210ENST00000548874 OR1G1P47890 313 aa22.78■■□□□ 1.24
CACNB3-210ENST00000548874 ALDH7A1P49419 539 aaKnown RBP22.78■■□□□ 1.24
CACNB3-210ENST00000548874 ZACNQ401N2 412 aa22.78■■□□□ 1.24
CACNB3-210ENST00000548874 PPP2R2DQ66LE6 453 aa22.78■■□□□ 1.24
CACNB3-210ENST00000548874 TRAPPC11Q7Z392 1133 aa22.78■■□□□ 1.24
CACNB3-210ENST00000548874 SLC39A11Q8N1S5 342 aa22.78■■□□□ 1.24
CACNB3-210ENST00000548874 SAMD11Q96NU1 681 aa22.78■■□□□ 1.24
CACNB3-210ENST00000548874 TGS1Q96RS0 853 aaKnown RBP22.78■■□□□ 1.24
CACNB3-210ENST00000548874 C17orf80Q9BSJ5 609 aa22.78■■□□□ 1.24
CACNB3-210ENST00000548874 SLC28A3Q9HAS3 691 aa22.78■■□□□ 1.24
CACNB3-210ENST00000548874 MARCH5Q9NX47 278 aa22.78■■□□□ 1.24
CACNB3-210ENST00000548874 SIX4Q9UIU6 781 aa22.78■■□□□ 1.24
CACNB3-210ENST00000548874 ITGA11Q9UKX5 1188 aa22.78■■□□□ 1.24
CACNB3-210ENST00000548874 FAN1Q9Y2M0 1017 aa22.78■■□□□ 1.24
CACNB3-210ENST00000548874 NLRC5Q86WI3 1866 aa22.77■■□□□ 1.24
CACNB3-210ENST00000548874 KCNJ18B7U540 433 aa22.77■■□□□ 1.24
CACNB3-210ENST00000548874 C5orf67F2Z3F1 127 aa22.77■■□□□ 1.24
CACNB3-210ENST00000548874 PIRO00625 290 aa22.77■■□□□ 1.24
CACNB3-210ENST00000548874 STX10O60499 249 aa22.77■■□□□ 1.24
CACNB3-210ENST00000548874 KCNJ12Q14500 433 aa22.77■■□□□ 1.24
CACNB3-210ENST00000548874 HSP90AA4PQ58FG1 418 aa22.77■■□□□ 1.24
CACNB3-210ENST00000548874 TCP11X2Q5H9J9 407 aa22.77■■□□□ 1.24
CACNB3-210ENST00000548874 DCAF17Q5H9S7 520 aaPredicted RBP22.77■■□□□ 1.24
CACNB3-210ENST00000548874 TCERG1LQ5VWI1 586 aa22.77■■□□□ 1.24
CACNB3-210ENST00000548874 TDRD10Q5VZ19 366 aaKnown RBP22.77■■□□□ 1.24
CACNB3-210ENST00000548874 C9orf57Q5W0N0 161 aa22.77■■□□□ 1.24
CACNB3-210ENST00000548874 SCARA3Q6AZY7 606 aa22.77■■□□□ 1.24
CACNB3-210ENST00000548874 DCLRE1AQ6PJP8 1040 aa22.77■■□□□ 1.24
CACNB3-210ENST00000548874 CD300LGQ6UXG3 332 aa22.77■■□□□ 1.24
CACNB3-210ENST00000548874 SV2AQ7L0J3 742 aa22.77■■□□□ 1.24
CACNB3-210ENST00000548874 LUZP1Q86V48 1076 aa22.77■■□□□ 1.24
CACNB3-210ENST00000548874 TMEM173Q86WV6 379 aaPredicted RBP22.77■■□□□ 1.24
CACNB3-210ENST00000548874 C3orf58Q8NDZ4 430 aa22.77■■□□□ 1.24
CACNB3-210ENST00000548874 BCL7CQ8WUZ0 217 aaPredicted RBP22.77■■□□□ 1.24
CACNB3-210ENST00000548874 RABGGTAQ92696 567 aa22.77■■□□□ 1.24
CACNB3-210ENST00000548874 PLVAPQ9BX97 442 aa22.77■■□□□ 1.24
CACNB3-210ENST00000548874 TMEM8AQ9HCN3 771 aa22.77■■□□□ 1.24
CACNB3-210ENST00000548874 MAGEC2Q9UBF1 373 aaPredicted RBP22.77■■□□□ 1.24
CACNB3-210ENST00000548874 PRG3Q9Y2Y8 225 aaPredicted RBP22.77■■□□□ 1.24
CACNB3-210ENST00000548874 PCDHB12Q9Y5F1 795 aa22.77■■□□□ 1.24
CACNB3-210ENST00000548874 BECN2A8MW95 431 aa22.76■■□□□ 1.23
CACNB3-210ENST00000548874 NT5C1B-RDH14C9J2C7 533 aa22.76■■□□□ 1.23
CACNB3-210ENST00000548874 F8W810 466 aa22.76■■□□□ 1.23
CACNB3-210ENST00000548874 SOX1O00570 391 aaPredicted RBP22.76■■□□□ 1.23
CACNB3-210ENST00000548874 PPEF2O14830 753 aa22.76■■□□□ 1.23
CACNB3-210ENST00000548874 KIF4AO95239 1232 aa22.76■■□□□ 1.23
CACNB3-210ENST00000548874 ITGB3P05106 788 aa22.76■■□□□ 1.23
CACNB3-210ENST00000548874 CTNNB1P35222 781 aa22.76■■□□□ 1.23
CACNB3-210ENST00000548874 PPM1AP35813 382 aa22.76■■□□□ 1.23
CACNB3-210ENST00000548874 GCLMP48507 274 aa22.76■■□□□ 1.23
CACNB3-210ENST00000548874 EPC2Q52LR7 807 aa22.76■■□□□ 1.23
CACNB3-210ENST00000548874 IGSF21Q96ID5 467 aa22.76■■□□□ 1.23
CACNB3-210ENST00000548874 ANP32EQ9BTT0 268 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms