RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 NEK4P51957 841 aa18.07■□□□□ 0.48
SSH1-208ENST00000548522 EFNA5P52803 228 aa18.07■□□□□ 0.48
SSH1-208ENST00000548522 ZNF568Q3ZCX4 644 aa18.07■□□□□ 0.48
SSH1-208ENST00000548522 ZBTB41Q5SVQ8 909 aa18.07■□□□□ 0.48
SSH1-208ENST00000548522 ALKAL1Q6UXT8 129 aa18.07■□□□□ 0.48
SSH1-208ENST00000548522 C18orf25Q96B23 403 aaPredicted RBP18.07■□□□□ 0.48
SSH1-208ENST00000548522 CLDN23Q96B33 292 aa18.07■□□□□ 0.48
SSH1-208ENST00000548522 CORO1BQ9BR76 489 aa18.07■□□□□ 0.48
SSH1-208ENST00000548522 PTPRHQ9HD43 1115 aa18.07■□□□□ 0.48
SSH1-208ENST00000548522 GDE1Q9NZC3 331 aa18.07■□□□□ 0.48
SSH1-208ENST00000548522 NCDNQ9UBB6 729 aa18.07■□□□□ 0.48
SSH1-208ENST00000548522 SMG5Q9UPR3 1016 aaKnown RBP18.07■□□□□ 0.48
SSH1-208ENST00000548522 TNFSF13BQ9Y275 285 aa18.07■□□□□ 0.48
SSH1-208ENST00000548522 PCDHGA2Q9Y5H1 932 aa18.07■□□□□ 0.48
SSH1-208ENST00000548522 PHLPP2Q6ZVD8 1323 aa18.06■□□□□ 0.48
SSH1-208ENST00000548522 PRRG1O14668 218 aa18.06■□□□□ 0.48
SSH1-208ENST00000548522 TBC1D4O60343 1298 aa18.06■□□□□ 0.48
SSH1-208ENST00000548522 ABLIM3O94929 683 aa18.06■□□□□ 0.48
SSH1-208ENST00000548522 LRG1P02750 347 aa18.06■□□□□ 0.48
SSH1-208ENST00000548522 NPTX2P47972 431 aa18.06■□□□□ 0.48
SSH1-208ENST00000548522 PEX3P56589 373 aa18.06■□□□□ 0.48
SSH1-208ENST00000548522 MTAPQ13126 283 aa18.06■□□□□ 0.48
SSH1-208ENST00000548522 XKR4Q5GH76 650 aa18.06■□□□□ 0.48
SSH1-208ENST00000548522 FAM78AQ5JUQ0 283 aa18.06■□□□□ 0.48
SSH1-208ENST00000548522 TTC38Q5R3I4 469 aa18.06■□□□□ 0.48
SSH1-208ENST00000548522 HAUS3Q68CZ6 603 aa18.06■□□□□ 0.48
SSH1-208ENST00000548522 ZNF687Q8N1G0 1237 aa18.06■□□□□ 0.48
SSH1-208ENST00000548522 C4orf32Q8N8J7 132 aa18.06■□□□□ 0.48
SSH1-208ENST00000548522 ZBTB44Q8NCP5 570 aa18.06■□□□□ 0.48
SSH1-208ENST00000548522 ZNF461Q8TAF7 563 aa18.06■□□□□ 0.48
SSH1-208ENST00000548522 KIFAP3Q92845 792 aa18.06■□□□□ 0.48
SSH1-208ENST00000548522 ACO2Q99798 780 aaKnown RBP18.06■□□□□ 0.48
SSH1-208ENST00000548522 TARS2Q9BW92 718 aaKnown RBP18.06■□□□□ 0.48
SSH1-208ENST00000548522 CYP4F11Q9HBI6 524 aa18.06■□□□□ 0.48
SSH1-208ENST00000548522 PRMT8Q9NR22 394 aaPredicted RBP18.06■□□□□ 0.48
SSH1-208ENST00000548522 DDX19AQ9NUU7 478 aaKnown RBP18.06■□□□□ 0.48
SSH1-208ENST00000548522 KIAA1024Q9UPX6 916 aa18.06■□□□□ 0.48
SSH1-208ENST00000548522 CCDC169A6NNP5 214 aa18.05■□□□□ 0.48
SSH1-208ENST00000548522 PP2D1A8MPX8 630 aa18.05■□□□□ 0.48
SSH1-208ENST00000548522 K7ERI5 159 aa18.05■□□□□ 0.48
SSH1-208ENST00000548522 ABLIM1O14639 778 aa18.05■□□□□ 0.48
SSH1-208ENST00000548522 TRAPPC3O43617 180 aa18.05■□□□□ 0.48
SSH1-208ENST00000548522 HARSP12081 509 aaKnown RBP18.05■□□□□ 0.48
SSH1-208ENST00000548522 SAFBQ15424 915 aaKnown RBP eCLIP18.05■□□□□ 0.48
SSH1-208ENST00000548522 CCDC83Q8IWF9 413 aa18.05■□□□□ 0.48
SSH1-208ENST00000548522 HS6ST3Q8IZP7 471 aa18.05■□□□□ 0.48
SSH1-208ENST00000548522 ATRIPQ8WXE1 791 aa18.05■□□□□ 0.48
SSH1-208ENST00000548522 NELL1Q92832 810 aa18.05■□□□□ 0.48
SSH1-208ENST00000548522 ELSPBP1Q96BH3 223 aa18.05■□□□□ 0.48
SSH1-208ENST00000548522 C8orf76Q96K31 380 aa18.05■□□□□ 0.48
SSH1-208ENST00000548522 ZSWIM3Q96MP5 696 aa18.05■□□□□ 0.48
SSH1-208ENST00000548522 RUSC1Q9BVN2 902 aa18.05■□□□□ 0.48
SSH1-208ENST00000548522 CCDC94Q9BW85 323 aaPredicted RBP18.05■□□□□ 0.48
SSH1-208ENST00000548522 AVENQ9NQS1 362 aaPredicted RBP18.05■□□□□ 0.48
SSH1-208ENST00000548522 ZSCAN32Q9NX65 697 aa18.05■□□□□ 0.48
SSH1-208ENST00000548522 FBXL5Q9UKA1 691 aa18.05■□□□□ 0.48
SSH1-208ENST00000548522 NDRG2Q9UN36 371 aaKnown RBP18.05■□□□□ 0.48
SSH1-208ENST00000548522 INSL5Q9Y5Q6 135 aa18.05■□□□□ 0.48
SSH1-208ENST00000548522 COL4A2P08572 1712 aa18.04■□□□□ 0.48
SSH1-208ENST00000548522 E9PMD0 336 aa18.04■□□□□ 0.48
SSH1-208ENST00000548522 LILRB5O75023 590 aa18.04■□□□□ 0.48
SSH1-208ENST00000548522 ATF2P15336 505 aa18.04■□□□□ 0.48
SSH1-208ENST00000548522 GJA1P17302 382 aa18.04■□□□□ 0.48
SSH1-208ENST00000548522 PTPN2P17706 415 aa18.04■□□□□ 0.48
SSH1-208ENST00000548522 FXR2P51116 673 aaKnown RBP eCLIP18.04■□□□□ 0.48
SSH1-208ENST00000548522 YARSP54577 528 aaKnown RBP18.04■□□□□ 0.48
SSH1-208ENST00000548522 SEZ6Q53EL9 994 aa18.04■□□□□ 0.48
SSH1-208ENST00000548522 ZNF852Q6ZMS4 543 aa18.04■□□□□ 0.48
SSH1-208ENST00000548522 RTL10Q7L3V2 364 aa18.04■□□□□ 0.48
SSH1-208ENST00000548522 SNX29Q8TEQ0 813 aa18.04■□□□□ 0.48
SSH1-208ENST00000548522 EPC1Q9H2F5 836 aa18.04■□□□□ 0.48
SSH1-208ENST00000548522 TOPORSQ9NS56 1045 aaPredicted RBP18.04■□□□□ 0.48
SSH1-208ENST00000548522 ARHGAP28Q9P2N2 729 aa18.04■□□□□ 0.48
SSH1-208ENST00000548522 LRWD1Q9UFC0 647 aa18.04■□□□□ 0.48
SSH1-208ENST00000548522 F5P12259 2224 aa18.03■□□□□ 0.48
SSH1-208ENST00000548522 HIP1RO75146 1068 aa18.03■□□□□ 0.48
SSH1-208ENST00000548522 MOSPD3O75425 235 aa18.03■□□□□ 0.48
SSH1-208ENST00000548522 TDGF1P13385 188 aa18.03■□□□□ 0.48
SSH1-208ENST00000548522 PROZP22891 400 aa18.03■□□□□ 0.48
SSH1-208ENST00000548522 ELF1P32519 619 aa18.03■□□□□ 0.48
SSH1-208ENST00000548522 MAGEA9P43362 315 aa18.03■□□□□ 0.48
SSH1-208ENST00000548522 RPS9P46781 194 aaKnown RBP18.03■□□□□ 0.48
SSH1-208ENST00000548522 ADCY1Q08828 1119 aa18.03■□□□□ 0.48
SSH1-208ENST00000548522 MAPK7Q13164 816 aa18.03■□□□□ 0.48
SSH1-208ENST00000548522 ORC2Q13416 577 aaPredicted RBP18.03■□□□□ 0.48
SSH1-208ENST00000548522 VITQ6UXI7 678 aa18.03■□□□□ 0.48
SSH1-208ENST00000548522 KCNK18Q7Z418 384 aa18.03■□□□□ 0.48
SSH1-208ENST00000548522 TCEAL8Q8IYN2 117 aa18.03■□□□□ 0.48
SSH1-208ENST00000548522 DNASE1L2Q92874 299 aa18.03■□□□□ 0.48
SSH1-208ENST00000548522 ZBTB45Q96K62 511 aaPredicted RBP18.03■□□□□ 0.48
SSH1-208ENST00000548522 ASB16Q96NS5 453 aa18.03■□□□□ 0.48
SSH1-208ENST00000548522 MRPL4Q9BYD3 311 aaKnown RBP18.03■□□□□ 0.48
SSH1-208ENST00000548522 FOXP1Q9H334 677 aaPredicted RBP18.03■□□□□ 0.48
SSH1-208ENST00000548522 BRD9Q9H8M2 597 aa18.03■□□□□ 0.48
SSH1-208ENST00000548522 CEP72Q9P209 647 aa18.03■□□□□ 0.48
SSH1-208ENST00000548522 CNTN3Q9P232 1028 aa18.03■□□□□ 0.48
SSH1-208ENST00000548522 TUBGCP4Q9UGJ1 667 aa18.03■□□□□ 0.48
SSH1-208ENST00000548522 TRIP11Q15643 1979 aa18.02■□□□□ 0.48
SSH1-208ENST00000548522 SYN3O14994 580 aa18.02■□□□□ 0.48
SSH1-208ENST00000548522 EIF5BO60841 1220 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms