RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 C18orf25Q96B23 403 aaPredicted RBP11.9□□□□□ -0.5
GCN1-202ENST00000547263 TIGD1Q96MW7 591 aa11.9□□□□□ -0.5
GCN1-202ENST00000547263 CBWD1Q9BRT8 395 aa11.9□□□□□ -0.5
GCN1-202ENST00000547263 MSTO1Q9BUK6 570 aa11.9□□□□□ -0.5
GCN1-202ENST00000547263 RHOBTB2Q9BYZ6 727 aa11.9□□□□□ -0.5
GCN1-202ENST00000547263 S1PR5Q9H228 398 aa11.9□□□□□ -0.5
GCN1-202ENST00000547263 RPF1Q9H9Y2 349 aaKnown RBP11.9□□□□□ -0.5
GCN1-202ENST00000547263 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.9□□□□□ -0.5
GCN1-202ENST00000547263 CLDND1Q9NY35 253 aa11.9□□□□□ -0.5
GCN1-202ENST00000547263 CHMP5Q9NZZ3 219 aa11.9□□□□□ -0.5
GCN1-202ENST00000547263 CGNQ9P2M7 1197 aaKnown RBP11.9□□□□□ -0.5
GCN1-202ENST00000547263 UBQLN1Q9UMX0 589 aaKnown RBP11.9□□□□□ -0.5
GCN1-202ENST00000547263 TCF20Q9UGU0 1960 aaKnown RBP11.9□□□□□ -0.5
GCN1-202ENST00000547263 SCN1AP35498 2009 aa11.89□□□□□ -0.51
GCN1-202ENST00000547263 PODXLO00592 558 aa11.89□□□□□ -0.51
GCN1-202ENST00000547263 MBTPS2O43462 519 aa11.89□□□□□ -0.51
GCN1-202ENST00000547263 EXTL3O43909 919 aa11.89□□□□□ -0.51
GCN1-202ENST00000547263 LDHAP00338 332 aaKnown RBP11.89□□□□□ -0.51
GCN1-202ENST00000547263 HARSP12081 509 aaKnown RBP11.89□□□□□ -0.51
GCN1-202ENST00000547263 ACOT2P49753 483 aa11.89□□□□□ -0.51
GCN1-202ENST00000547263 CLCN4P51793 760 aa11.89□□□□□ -0.51
GCN1-202ENST00000547263 MCCD1P59942 119 aaPredicted RBP11.89□□□□□ -0.51
GCN1-202ENST00000547263 RBM10P98175 930 aaKnown RBP11.89□□□□□ -0.51
GCN1-202ENST00000547263 PPP2R3AQ06190 1150 aa11.89□□□□□ -0.51
GCN1-202ENST00000547263 SMAD4Q13485 552 aaKnown RBP11.89□□□□□ -0.51
GCN1-202ENST00000547263 BMS1Q14692 1282 aaKnown RBP11.89□□□□□ -0.51
GCN1-202ENST00000547263 SMAD2Q15796 467 aaKnown RBP11.89□□□□□ -0.51
GCN1-202ENST00000547263 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.89□□□□□ -0.51
GCN1-202ENST00000547263 RBM23Q86U06 439 aaKnown RBP11.89□□□□□ -0.51
GCN1-202ENST00000547263 EFCAB13Q8IY85 973 aa11.89□□□□□ -0.51
GCN1-202ENST00000547263 ZSWIM2Q8NEG5 633 aa11.89□□□□□ -0.51
GCN1-202ENST00000547263 LNX1Q8TBB1 728 aaPredicted RBP11.89□□□□□ -0.51
GCN1-202ENST00000547263 HDAC7Q8WUI4 952 aa11.89□□□□□ -0.51
GCN1-202ENST00000547263 POMGNT1Q8WZA1 660 aa11.89□□□□□ -0.51
GCN1-202ENST00000547263 RABGGTAQ92696 567 aa11.89□□□□□ -0.51
GCN1-202ENST00000547263 SUSD3Q96L08 255 aa11.89□□□□□ -0.51
GCN1-202ENST00000547263 KCTD10Q9H3F6 313 aa11.89□□□□□ -0.51
GCN1-202ENST00000547263 MRPL17Q9NRX2 175 aaKnown RBP11.89□□□□□ -0.51
GCN1-202ENST00000547263 AGPAT3Q9NRZ7 376 aa11.89□□□□□ -0.51
GCN1-202ENST00000547263 TUBGCP4Q9UGJ1 667 aa11.89□□□□□ -0.51
GCN1-202ENST00000547263 BARX2Q9UMQ3 279 aaPredicted RBP11.89□□□□□ -0.51
GCN1-202ENST00000547263 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.88□□□□□ -0.51
GCN1-202ENST00000547263 H3BQ06 376 aaPredicted RBP11.88□□□□□ -0.51
GCN1-202ENST00000547263 M0QZQ0 153 aa11.88□□□□□ -0.51
GCN1-202ENST00000547263 PIRO00625 290 aa11.88□□□□□ -0.51
GCN1-202ENST00000547263 SYN3O14994 580 aa11.88□□□□□ -0.51
GCN1-202ENST00000547263 TEX28O15482 410 aa11.88□□□□□ -0.51
GCN1-202ENST00000547263 TADA2AO75478 443 aa11.88□□□□□ -0.51
GCN1-202ENST00000547263 B3GAT3O94766 335 aa11.88□□□□□ -0.51
GCN1-202ENST00000547263 IL18RAPO95256 599 aa11.88□□□□□ -0.51
GCN1-202ENST00000547263 URODP06132 367 aa11.88□□□□□ -0.51
GCN1-202ENST00000547263 NFICP08651 508 aa11.88□□□□□ -0.51
GCN1-202ENST00000547263 HOXB8P17481 243 aaPredicted RBP11.88□□□□□ -0.51
GCN1-202ENST00000547263 PAX3P23760 479 aa11.88□□□□□ -0.51
GCN1-202ENST00000547263 ANP32AP39687 249 aaKnown RBP11.88□□□□□ -0.51
GCN1-202ENST00000547263 FAM160A1Q05DH4 1040 aa11.88□□□□□ -0.51
GCN1-202ENST00000547263 KNOP1Q1ED39 458 aaKnown RBP11.88□□□□□ -0.51
GCN1-202ENST00000547263 COBLL1Q53SF7 1204 aa11.88□□□□□ -0.51
GCN1-202ENST00000547263 JADE1Q6IE81 842 aa11.88□□□□□ -0.51
GCN1-202ENST00000547263 ANKRD54Q6NXT1 300 aa11.88□□□□□ -0.51
GCN1-202ENST00000547263 KANK3Q6NY19 840 aa11.88□□□□□ -0.51
GCN1-202ENST00000547263 PPFIBP1Q86W92 1011 aa11.88□□□□□ -0.51
GCN1-202ENST00000547263 SLC9A9Q8IVB4 645 aa11.88□□□□□ -0.51
GCN1-202ENST00000547263 CASP10Q92851 521 aa11.88□□□□□ -0.51
GCN1-202ENST00000547263 CLSTN3Q9BQT9 956 aa11.88□□□□□ -0.51
GCN1-202ENST00000547263 TTPALQ9BTX7 342 aa11.88□□□□□ -0.51
GCN1-202ENST00000547263 COL25A1Q9BXS0 654 aaPredicted RBP11.88□□□□□ -0.51
GCN1-202ENST00000547263 GZF1Q9H116 711 aaPredicted RBP11.88□□□□□ -0.51
GCN1-202ENST00000547263 SLC39A2Q9NP94 309 aa11.88□□□□□ -0.51
GCN1-202ENST00000547263 DMAC2Q9NW81 257 aa11.88□□□□□ -0.51
GCN1-202ENST00000547263 MTRRQ9UBK8 725 aa11.88□□□□□ -0.51
GCN1-202ENST00000547263 CD207Q9UJ71 328 aa11.88□□□□□ -0.51
GCN1-202ENST00000547263 BACE2Q9Y5Z0 518 aa11.88□□□□□ -0.51
GCN1-202ENST00000547263 C2orf16Q68DN1 1984 aa11.88□□□□□ -0.51
GCN1-202ENST00000547263 C19orf67A6NJJ6 358 aa11.87□□□□□ -0.51
GCN1-202ENST00000547263 XPOTO43592 962 aaKnown RBP11.87□□□□□ -0.51
GCN1-202ENST00000547263 CSPG5O95196 566 aa11.87□□□□□ -0.51
GCN1-202ENST00000547263 RPN1P04843 607 aaKnown RBP11.87□□□□□ -0.51
GCN1-202ENST00000547263 BRCC3P46736 316 aa11.87□□□□□ -0.51
GCN1-202ENST00000547263 CREMQ03060 361 aa11.87□□□□□ -0.51
GCN1-202ENST00000547263 MYBPC2Q14324 1141 aa11.87□□□□□ -0.51
GCN1-202ENST00000547263 NFIL3Q16649 462 aa11.87□□□□□ -0.51
GCN1-202ENST00000547263 FAM171A1Q5VUB5 890 aa11.87□□□□□ -0.51
GCN1-202ENST00000547263 PDXDC1Q6P996 788 aa11.87□□□□□ -0.51
GCN1-202ENST00000547263 GPD1LQ8N335 351 aa11.87□□□□□ -0.51
GCN1-202ENST00000547263 TMEM130Q8N3G9 435 aa11.87□□□□□ -0.51
GCN1-202ENST00000547263 CMASQ8NFW8 434 aaPredicted RBP11.87□□□□□ -0.51
GCN1-202ENST00000547263 HASPINQ8TF76 798 aa11.87□□□□□ -0.51
GCN1-202ENST00000547263 KIF12Q96FN5 646 aa11.87□□□□□ -0.51
GCN1-202ENST00000547263 BORCS6Q96GS4 357 aa11.87□□□□□ -0.51
GCN1-202ENST00000547263 EMILIN2Q9BXX0 1053 aa11.87□□□□□ -0.51
GCN1-202ENST00000547263 IGFLR1Q9H665 355 aa11.87□□□□□ -0.51
GCN1-202ENST00000547263 KIAA1586Q9HCI6 787 aa11.87□□□□□ -0.51
GCN1-202ENST00000547263 DZANK1Q9NVP4 752 aa11.87□□□□□ -0.51
GCN1-202ENST00000547263 HSPBP1Q9NZL4 362 aa11.87□□□□□ -0.51
GCN1-202ENST00000547263 PRKAG3Q9UGI9 489 aa11.87□□□□□ -0.51
GCN1-202ENST00000547263 TRAF3IP3Q9Y228 551 aa11.87□□□□□ -0.51
GCN1-202ENST00000547263 TRAPPC3O43617 180 aa11.86□□□□□ -0.51
GCN1-202ENST00000547263 ADH1AP07327 375 aa11.86□□□□□ -0.51
GCN1-202ENST00000547263 IL9P15248 144 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms